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Aliases & Descriptions for CCK
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| MGC117187 2 | | OTTHUMP00000162607 2 | | cholecystokinin 2 |
| | |
| | Search outside databases for aliases for CCK genePrevious GC identifers: GC03P041561 GC03U900036 GC03M9D0028 |
Summaries for CCK(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CCK: Cholecystokinin is a brain/gut peptide. In the gut, it induces the release of pancreatic enzymes and the contraction of the gallbladder. In the brain, its physiologic role is unclear. The cholecystokinin pro-hormone is processed by endo- and exo-proteolytic cleavages. [provided by RefSeq] UniProtKB/Swiss-Prot: CCKN_HUMAN, P06307Function: This peptide hormone induces gall bladder contraction and the release of pancreatic enzymes in the gut. Its function in the brain is not clear. Binding to CCK-A receptors stimulates amylase release from the pancreas, binding to CCK-B receptors stimulates gastric acid secretionGene Wiki entry for CCK (Cholecystokinin) |
Genomic Location for CCK
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CCK gene 
Entrez Gene cytogenetic band: 3p22-p21.3 Ensembl cytogenetic band: 3p22.1 HGNC cytogenetic band: 3pter-p21CCK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03M042274:
(about GC identifiers)
Start:
|
42,274,321 bp from pter |
End:
|
42,282,666 bp from pter |
Size:
|
8,346 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000003.10 NT_022517.17
| Proteins for CCK
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CCKN_HUMAN, P06307 (See
protein sequence)Recommended Name: Cholecystokinin precursor Size: 115 amino acids; 12669 Da
Subunit: Binds to CCK-A receptors in the pancreas and CCK-B receptors in the brain (By similarity)
Subcellular location: SecretedPost-translational modifications:
The precursor is cleaved by proteases to produce a number of active cholecystokinins1
REFSEQ proteins: NP_000720.1
ENSEMBL proteins: ENSP00000379472 ENSP00000335657
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CCK: Assays for CCK: | Protein
Domains/ Families for CCK(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P06307
ProtoNet protein and cluster: P06307 1 Blocks protein family: IPB001651 Gastrin/cholecystokinin peptide hormone
UniProtKB/Swiss-Prot: CCKN_HUMAN, P06307Similarity: Belongs to the gastrin/cholecystokinin family | Gene Function for CCK
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000729
Applied Biosystems Silencer® siRNAs for CCK
Sigma-Aldrich siRNA and siRNA Panels for CCK  Sigma-Aldrich shRNA Panels and shRNA for CCK  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000729                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000729                                  untagged cDNA clone in CMV expression vector: NM_000729 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000729
UniProtKB/Swiss-Prot: CCKN_HUMAN, P06307Function: This peptide hormone induces gall bladder contraction and the release of pancreatic enzymes in the gut. Its function in the brain is not clear. Binding to CCK-A receptors stimulates amylase release from the pancreas, binding to CCK-B receptors stimulates gastric acid secretionGenatlas biochemistry entry for CCK:cholecystokinin4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Cck):
2 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005184 | neuropeptide hormone activity |
IEA | -- | | GO:0005515 | protein binding |
IEA | -- | About this table | Pathways & Interactions for CCK
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for CCK (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CCK 
5/43 Interacting proteins for CCK (ENSP000003356573) via UniProtKB, MINT, and/or STRING (see all 43
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for CCK(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for CCK available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| YM 022 | Highly potent, selective non-peptide CCK2 antagonist | [145084-28-2] | | Butabindide oxalate | CCK-inactivating serine protease inhibitor | [175553-48-7] | | Devazepide | Selective, orally active CCK1 receptor antagonist | [103420-77-5] | | LY 225910 | Potent CCK2 antagonist | [133040-77-4] | | WIN 64338 hydrochloride | Bradykinin B2 antagonist | [151039-63-3] | About this table
10/50 Novoseek chemical compound relationships for CCK gene (see all 50
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| sincalide |
81.79 |
10 |
9252846 (2), 1932168 (2), 2183285 (1), 1860640 (1) (see all 7) |
| oxyntomodulin |
79.46 |
36 |
15082874 (2), 8418694 (2), 2192696 (1), 8223069 (1) (see all 23) |
| caerulein |
79.33 |
31 |
1708407 (2), 7679894 (2), 2362955 (2), 2394497 (1) (see all 26) |
| dexloxiglumide |
77.30 |
3 |
16163898 (1), 16484960 (1) |
| minigastrin |
75.64 |
3 |
17707803 (2), 17896914 (1), 17934729 (1) |
| enterostatin |
73.93 |
11 |
9344422 (1), 15998351 (1), 17044813 (1), 9017279 (1) (see all 10) |
| cck-9 |
72.03 |
4 |
8094956 (2), 16326901 (1) |
| epft |
68.01 |
1 |
15481311 (1) |
| l365260 |
67.98 |
6 |
8942742 (2), 11559776 (1), 7890609 (1), 7973426 (1) (see all 5) |
| cholecystokinin tetrapeptide |
66.90 |
1 |
8580227 (1) |
About this table
|
Transcripts for CCK(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000729
Sigma-Aldrich siRNA and siRNA Panels for CCK  Sigma-Aldrich shRNA Panels and shRNA for CCK  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000729 REFSEQ mRNAs for CCK gene: NM_000729.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000729               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000729                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000729                                  untagged cDNA clone in CMV expression vector: NM_000729  Additional cDNA sequence: AK289716.1 AK300784.1 BC008283.1 BC093055.1 BC111026.1 BT006991.1 CR542226.1 5 DOTS entries: DT.214017 DT.100752141 DT.97780058 DT.436880 DT.95189754 24/84 AceView cDNA sequences (see all 84
):BT006991 AU077189 BM817700 BM725598 CB117972 BX281746 CB154424 AA376289 CB154571 BC008283 CR542226 BM833562 BI754947 CD250282 CF527983 AW043690 BI824082 AW956319 BI756101 BM753873 N30191 BI670261 BM724466 NM_000729
highest scoring ESTs for CCK:AA376289 AU077189 AW043690 AW956319 BG621508 BG621883 BI599664 BI602158 BI667924 BI669286 Unigene Cluster for CCK: Cholecystokinin Hs.458426 [show with all ESTs]Unigene Representative Sequence: BC111026
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000396169
ENST00000334681
|
Expression for CCK
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CCK expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CCK
1 / 2 / 3 3 probe-sets matching CCK gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGCTGGATGG
SOURCE GeneReport for Unigene cluster: Hs.458426
Expression variation in blood from EXPOLDB for CCK |
Orthologs for CCK
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CCK gene from 5/6 species (see all 6
)
About this table Species with no ortholog for CCK
ENSEMBL Gene Tree for CCK | Paralogs for CCK(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for CCK(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CCK (up to first 250kb)
|
Disorders & Mutations for CCK
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 118440
10/95 Novoseek disease relationships for CCK gene (see all 95
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| biliary dyskinesia |
80.13 |
6 |
8273847 (1), 15054652 (1), 9374365 (1), 15322841 (1) (see all 5) |
| ovarian stromal cancer |
75.88 |
1 |
9575243 (1) |
| pancreas exocrine |
71.05 |
29 |
18165448 (2), 1438984 (1), 10981031 (1), 1318128 (1) (see all 20) |
| gall bladder |
70.95 |
67 |
12477770 (6), 8174967 (4), 7890230 (4), 7548456 (3) (see all 30) |
| chronic cholecystitis |
64.92 |
4 |
2375327 (1), 9596151 (1), 16954554 (1) |
| pancreatic insufficiency |
64.70 |
15 |
9140152 (3), 17460968 (1), 9539652 (1), 7611207 (1) (see all 10) |
| panic attacks |
63.66 |
30 |
11244486 (2), 8372405 (2), 8317587 (1), 12007753 (1) (see all 19) |
| panic disorder |
63.55 |
83 |
9754694 (4), 9603610 (3), 15354400 (3), 11244486 (2) (see all 41) |
| chronic pancreatitis |
63.48 |
49 |
1916033 (4), 10919050 (4), 10438157 (3), 2188821 (3) (see all 23) |
| neuroepithelioma |
60.81 |
19 |
1631063 (3), 7694875 (2), 2384178 (1), 1977617 (1) (see all 9) |
About this table
Human Gene Mutation Database: CCK Genetic Association Database: CCK Human Genome Epidemiology Navigator: CCK (33 documents)
|
Medical News for CCK(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CCK (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/1517 PubMed articles for CCK gene (see all 1517
):- Molecular cloning of the human cholecystokinin gene by use of a synthetic probe containing deoxyinosine. (PubMed id 3856870)2, 3, 4 Takahashi Y.... Matsubara K. (1985)
- Cholecystokinin- and cholecystokinin-B-receptor gene polymorphisms in panic disorder. (PubMed id 15354400)1, 3, 6 Hosing V.G....Deckert J. (2004)
- Genetic polymorphisms in Parkinson disease subjects with and without hallucinations: an analysis of the cholecystokinin system. (PubMed id 15313848)1, 3, 6 Goldman J.G....Zhou L. (2004)
- No association of CCK and CCK(B) receptor polymorphisms with alcohol dependence. (PubMed id 11368834)1, 3, 6 Vanakoski J....Goldman D. (2001)
- Investigation of quantitative trait loci in the CCKAR gene with susceptibility to alcoholism. (PubMed id 12198366)1, 3, 6 Okubo T....Matsushita S. (2002)
- Association studies of the CT repeat polymorphism in the 5' upstream region of the cholecystokinin B receptor gene with panic disorder and schizophrenia in Japanese subjects. (PubMed id 11803530)1, 3, 6 Hattori E....Yoshikawa T. (2001)
- Identification of a compound short tandem repeat stretch in the 5'-upstream region of the cholecystokinin gene, and its association with panic disorder but not with schizophrenia. (PubMed id 11443535)1, 3, 6 Hattori E....Yoshikawa T. (2001)
- Role of tyrosine sulfation and serine phosphorylation in the processing of procholecystokinin to amidated cholecystokinin and its secretion in transfected AtT-20 cells. (PubMed id 11076522)1, 3, 4 Vishnuvardhan D. and Beinfeld M.C. (2000)
- Cholecystokinin (CCK) and the CCKA receptor gene polymorphism, and smoking behavior. (PubMed id 15740988)3, 6 Takimoto T....Iwahashi K. (2005)
- Polymorphisms of the cholecystokinin gene promoter region in suicide victims in Japan. (PubMed id 15837012)3, 6 Shindo S. and Yoshioka N. (2005)
|
Search for CCK
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CCK
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CCK
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CCK(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| NIEHS-SNPs | http://egp.gs.washington.edu/data/cck/ | | Wikipedia | http://en.wikipedia.org/wiki/Cholecystokinin |
|
| | | About This Section
| --
| Services for CCK(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CCK:

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| | | | Tocris compounds for CCK |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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