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Aliases for CCDC92 Gene

Aliases for CCDC92 Gene

  • Coiled-Coil Domain Containing 92 2 3
  • Limkain Beta 2 2
  • Limkain Beta-2 4

External Ids for CCDC92 Gene

Previous GeneCards Identifiers for CCDC92 Gene

  • GC12M122986
  • GC12M124420
  • GC12M121383
  • GC12M124403

Summaries for CCDC92 Gene

GeneCards Summary for CCDC92 Gene

CCDC92 (Coiled-Coil Domain Containing 92) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC92 Gene

Genomics for CCDC92 Gene

Regulatory Elements for CCDC92 Gene

Genomic Location for CCDC92 Gene

123,918,660 bp from pter
123,972,831 bp from pter
54,172 bases
Minus strand

Genomic View for CCDC92 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC92 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC92 Gene

Proteins for CCDC92 Gene

  • Protein details for CCDC92 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Coiled-coil domain-containing protein 92
    Protein Accession:
    Secondary Accessions:
    • B3KNQ0
    • Q9H697

    Protein attributes for CCDC92 Gene

    331 amino acids
    Molecular mass:
    36961 Da
    Quaternary structure:
    • Interacts with CEP164.
    • Sequence=BAD96381.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for CCDC92 Gene


neXtProt entry for CCDC92 Gene

Proteomics data for CCDC92 Gene at MOPED

Post-translational modifications for CCDC92 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for CCDC92 Gene

Domains for CCDC92 Gene

Protein Domains for CCDC92 Gene


Suggested Antigen Peptide Sequences for CCDC92 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC92: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC92 Gene

Function for CCDC92 Gene

Gene Ontology (GO) - Molecular Function for CCDC92 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 22458338
genes like me logo Genes that share ontologies with CCDC92: view

miRNA for CCDC92 Gene

miRTarBase miRNAs that target CCDC92

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC92

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for CCDC92 Gene

Localization for CCDC92 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CCDC92 Gene

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole.

Subcellular locations from

Jensen Localization Image for CCDC92 Gene COMPARTMENTS Subcellular localization image for CCDC92 gene
Compartment Confidence
cytoskeleton 5
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for CCDC92 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005814 centriole IDA 22863007
genes like me logo Genes that share ontologies with CCDC92: view

Pathways for CCDC92 Gene

SuperPathways for CCDC92 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC92 Gene


No data available for Pathways by source for CCDC92 Gene

Transcripts for CCDC92 Gene

mRNA/cDNA for CCDC92 Gene

(7) Additional mRNA sequences :
(7) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC92 Gene

Coiled-coil domain containing 92:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC92

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC92 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b ^ 8a · 8b ^ 9 ^ 10a · 10b · 10c · 10d · 10e · 10f · 10g · 10h
SP1: - - - - - - - -
SP2: - - - -
SP3: - - - -
SP4: - - - - - - - - -
SP5: - - - - - - - - - -
SP6: - - - - - - -
SP7: - - - - - -
SP8: - - - - - -

Relevant External Links for CCDC92 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CCDC92 Gene

mRNA expression in normal human tissues for CCDC92 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues for CCDC92 Gene

This gene is overexpressed in Ovary (31.3) and Monocytes (9.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for CCDC92 Gene

SOURCE GeneReport for Unigene cluster for CCDC92 Gene Hs.713131

genes like me logo Genes that share expressions with CCDC92: view

Expression partners for CCDC92 Gene

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for CCDC92 Gene

Orthologs for CCDC92 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CCDC92 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia CCDC92 35
  • 87.15 (n)
  • 90.76 (a)
CCDC92 36
  • 90 (a)
(Canis familiaris)
Mammalia CCDC92 35
  • 86.52 (n)
  • 88.89 (a)
CCDC92 36
  • 89 (a)
(Mus musculus)
Mammalia Ccdc92 35
  • 81.58 (n)
  • 87.22 (a)
Ccdc92 16
Ccdc92 36
  • 87 (a)
(Pan troglodytes)
Mammalia CCDC92 35
  • 98.29 (n)
  • 97.88 (a)
CCDC92 36
  • 98 (a)
(Rattus norvegicus)
Mammalia Ccdc92 35
  • 82 (n)
  • 87.54 (a)
(Monodelphis domestica)
Mammalia CCDC92 36
  • 78 (a)
(Ornithorhynchus anatinus)
Mammalia CCDC92 36
  • 83 (a)
(Gallus gallus)
Aves CCDC92 35
  • 75.48 (n)
  • 86.94 (a)
CCDC92 36
  • 83 (a)
(Anolis carolinensis)
Reptilia CCDC92 36
  • 85 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia ccdc92 35
  • 72.9 (n)
  • 79.03 (a)
(Danio rerio)
Actinopterygii ccdc92 35
  • 66.77 (n)
  • 70.51 (a)
ccdc92 36
  • 60 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.7515 35
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 30 (a)
Species with no ortholog for CCDC92:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CCDC92 Gene

Gene Tree for CCDC92 (if available)
Gene Tree for CCDC92 (if available)

Paralogs for CCDC92 Gene

No data available for Paralogs for CCDC92 Gene

Variants for CCDC92 Gene

Sequence variations from dbSNP and Humsavar for CCDC92 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs9863 -- 123,936,906(-) TTCAC(A/G)CCAAA utr-variant-3-prime
rs939464 -- 123,949,799(+) GGAAG(C/T)GCACT intron-variant
rs1053928 -- 123,968,320(-) AAACA(G/T)TTTAC intron-variant
rs1128802 -- 123,937,475(-) GCGCC(C/T)CCCAA reference, synonymous-codon
rs1882490 -- 123,969,462(+) TTCAG(G/T)ttttt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CCDC92 Gene

Variant ID Type Subtype PubMed ID
nsv522321 CNV Loss 19592680
esv259727 OTHER Complex 20981092
esv1305470 CNV Insertion 17803354

Relevant External Links for CCDC92 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC92 Gene

Disorders for CCDC92 Gene

Relevant External Links for CCDC92

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator

No disorders were found for CCDC92 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for CCDC92 Gene

Publications for CCDC92 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Forty-three loci associated with plasma lipoprotein size, concentration, and cholesterol content in genome-wide analysis. (PMID: 19936222) Chasman D.I. … Ridker P.M. (PLoS Genet. 2009) 3 48
  5. Exome capture reveals ZNF423 and CEP164 mutations, linking renal ciliopathies to DNA damage response signaling. (PMID: 22863007) Chaki M. … Hildebrandt F. (Cell 2012) 3 4

Products for CCDC92 Gene

Sources for CCDC92 Gene

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