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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CCDC88A Gene

protein-coding   GIFtS: 50
GCID: GC02M055514

coiled-coil domain containing 88A

(Previous name: KIAA1212 )
(Previous symbol: KIAA1212)
 Explore 5 diseases affiliated with
CCDC88A via our new
 Human Malady Compendium 
Biological research products
for CCDC88A
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Coiled-Coil Domain Containing 88A1 2     Hook-Related Protein 12 3
APE1 2 3 5     GIRDIN2 5
GIV1 2 3 5     FLJ103921
KIAA12121 2 3 5     AKT-Phosphorylation Enhancer2
GRDN1 2 3     Girdin1
HkRP11 2 3     Akt Phosphorylation Enhancer3
G Alpha-Interacting Vesicle-Associated Protein2 3     Coiled-Coil Domain-Containing Protein 88A3
Girders Of Actin Filament2 3     HKRP15

External Ids:    HGNC: 255231   Entrez Gene: 557042   Ensembl: ENSG000001153557   OMIM: 6097365   UniProtKB: Q3V6T23   

Export aliases for CCDC88A gene to outside databases

Previous GC identifers: GC02M055368 GC02M055250


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CCDC88A:
This gene encodes a member of the Girdin family of coiled-coil domain containing proteins. The encoded protein is an
actin-binding protein that is activated by the serine/threonine kinase Akt and plays a role in cytoskeleton remodeling
and cell migration. The encoded protein also enhances Akt signaling by mediating phosphoinositide 3-kinase
(PI3K)-dependent activation of Akt by growth factor receptor tyrosine kinases and G protein-coupled receptors.
Increased expression of this gene and phosphorylation of the encoded protein may play a role in cancer metastasis.
Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. (provided by
RefSeq, Dec 2011)

UniProtKB/Swiss-Prot: GRDN_HUMAN, Q3V6T2
Function: Plays a role as a key modulator of the AKT-mTOR signaling pathway controlling the tempo of the process of
newborn neurons integration during adult neurogenesis, including correct neuron positioning, dendritic development and
synapse formation. Enhances phosphoinositide 3-kinase (PI3K)-dependent phosphorylation and kinase activity of
AKT1/PKB, but does not possess kinase activity itself. Phosphorylation of AKT1/PKB thereby induces the phosphorylation
of downstream effectors GSK3 and FOXO1/FKHR, and regulates DNA replication and cell proliferation (By similarity).
Essential for the integrity of the actin cytoskeleton and for cell migration. Required for formation of actin stress
fibers and lamellipodia. May be involved in membrane sorting in the early endosome

Gene Wiki entry for CCDC88A


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022184.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CCDC88A gene promoter:
         CUTL1   E47   FOXL1   RORalpha2   PPAR-alpha   SRY   FOXO4   Hand1   ATF6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCCDC88A promoter sequence
   Search SABiosciences Chromatin IP Primers for CCDC88A

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCDC88A


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2p16.1   Ensembl cytogenetic band:  2p16.1   HGNC cytogenetic band: 2p16.3

CCDC88A Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CCDC88A gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M055514:  view genomic region     (about GC identifiers)

Start:
55,514,978 bp from pter      End:
55,647,057 bp from pter
Size:
132,080 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GRDN_HUMAN, Q3V6T2 (See protein sequence)
Recommended Name: Girdin  
Size: 1871 amino acids; 216042 Da
Subunit: Interacts (via C-terminus) with DISC1; the interaction is direct. Interacts with AKT proteins; the interaction
is inhibited in presence of DISC1 (By similarity). Homodimer. The non-phosphorylated form interacts with
phosphatidylinositol 4-phosphate [PI(4)P] and weakly with phosphatidylinositol 3-phosphate [PI(3)P]. Interacts with
microtubules. Interacts with actin through its C-terminal domain. Interacts with the C-terminus of AKT1/PKB
Subcellular location: Membrane. Cell membrane. Cytoplasm, cytosol. Cytoplasmic vesicle. Cell projection, lamellipodium.
Note=Localizes to the cell membrane through interaction with phosphoinositides
Sequence caution: Sequence=AAY14932.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=CAD97945.1; Type=Miscellaneous discrepancy; Note=Intron retention at the C-terminus; Sequence=CAI46020.1;
Type=Erroneous initiation; Note=Translation N-terminally extended;
Secondary accessions: A1IGE7 B7ZM78 C9JG83 Q53SF1 Q581G3 Q5HYD0 Q7Z339 Q7Z3C5
Alternative splicing: 5 isoforms:  Q3V6T2-1   Q3V6T2-2   Q3V6T2-3   Q3V6T2-4   Q3V6T2-5   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for CCDC88A: NX_Q3V6T2

Post-translational modifications:

  • Phosphorylation is induced by epidermal growth factor (EGF) in a phosphoinositide 3-kinase (PI3K)-dependent manner.
  • Phosphorylation by AKT1/PKB is necessary for the delocalization from the cell membrane and for cell migration1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q3V6T2

  • CCDC88A Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001129069.1  NP_001241872.1  NP_060554.3  

    ENSEMBL proteins: 
     ENSP00000338728   ENSP00000263630   ENSP00000413401   ENSP00000390012   ENSP00000405080  
     ENSP00000415267   ENSP00000399237   ENSP00000410608   ENSP00000404431   ENSP00000387974  

    Human Recombinant Protein Products: 
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for CCDC88A

    Gene Ontology (GO): 5/9 cellular component terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----
    GO:0005783endoplasmic reticulum IDA15882442
    GO:0005794Golgi apparatus IDA15882442
    GO:0005829cytosol IDA15749703
    GO:0005886plasma membrane IDA15882442


    CCDC88A for ontologies           About GeneDecksing



    CCDC88A Antibody Products: 
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    Uscn ELISAs and CLIAs for CCDC88A


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CCDC88A for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR008636 HOOK

    Graphical View of Domain Structure for InterPro Entry Q3V6T2

    ProtoNet protein and cluster: Q3V6T2

    UniProtKB/Swiss-Prot: GRDN_HUMAN, Q3V6T2
    Similarity: Belongs to the CCDC88 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GRDN_HUMAN, Q3V6T2
    Function: Plays a role as a key modulator of the AKT-mTOR signaling pathway controlling the tempo of the process of
    newborn neurons integration during adult neurogenesis, including correct neuron positioning, dendritic development and
    synapse formation. Enhances phosphoinositide 3-kinase (PI3K)-dependent phosphorylation and kinase activity of
    AKT1/PKB, but does not possess kinase activity itself. Phosphorylation of AKT1/PKB thereby induces the phosphorylation
    of downstream effectors GSK3 and FOXO1/FKHR, and regulates DNA replication and cell proliferation (By similarity).
    Essential for the integrity of the actin cytoskeleton and for cell migration. Required for formation of actin stress
    fibers and lamellipodia. May be involved in membrane sorting in the early endosome

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    hsa-miR-520e hsa-miR-607 hsa-miR-3146 hsa-miR-199a-3p hsa-miR-128 hsa-miR-3653 hsa-miR-578 hsa-miR-519a
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    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003779actin binding IDA16139227
    GO:0005515protein binding ----
    GO:0008017microtubule binding ISS--
    GO:0035091phosphatidylinositol binding IDA16139227
    GO:0042803protein homodimerization activity IPI16139227


    CCDC88A for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Ccdc88atm2.1Mat for CCDC88A
         7 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Ccdc88a):
     behavior/neurological  cardiovascular system  cellular  growth/size  mortality/aging 
     nervous system  vision/eye 

    CCDC88A for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CCDC88A

    STRING Interaction Network Preview (showing 5 interactants - click image to see 12)

    5/24 Interacting proteins for CCDC88A (Q3V6T23 ENSP000003387284) via UniProtKB, MINT, STRING, and/or I2D (see all 24)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    DISC1Q9NRI53, ENSP000003555964I2D: score=2 STRING: ENSP00000355596
    NDEL1Q9GZM83, ENSP000003339824I2D: score=2 STRING: ENSP00000333982
    PARD3Q8TEW03, ENSP000003639214I2D: score=2 STRING: ENSP00000363921
    PRKACAP176123, ENSP000003095914I2D: score=2 STRING: ENSP00000309591
    YWHAHQ049173, ENSP000002489754I2D: score=2 STRING: ENSP00000248975
    About this table

    Gene Ontology (GO): 5/12 biological process terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000226microtubule cytoskeleton organization IEA--
    GO:0001932regulation of protein phosphorylation ISS--
    GO:0006260DNA replication IEA--
    GO:0006275regulation of DNA replication ISS--
    GO:0010975regulation of neuron projection development ISS--


    CCDC88A for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CCDC88A
    Search CenterWatch for drugs/clinical trials and news about CCDC88A / GRDN 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CCDC88A gene (3 alternative transcripts): 
    NM_001135597.1  NM_001254943.1  NM_018084.4  

    Unigene Cluster for CCDC88A:

    Coiled-coil domain containing 88A
    Hs.292925  [show with all ESTs]
    Unigene Representative Sequence: NM_001135597
    14 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000336838(uc002ryt.2 uc010fbw.2 uc002rys.3 uc002ryu.2)
    ENST00000263630 ENST00000444458 ENST00000412148 ENST00000426576(uc010fby.1 uc002ryw.3)
    ENST00000456975 ENST00000474059 ENST00000476903 ENST00000468534 ENST00000430086
    ENST00000471947(uc010fbz.3) ENST00000436346(uc010ypa.1 uc002ryv.2 uc010yoz.1)
    ENST00000413716(uc010ypb.1) ENST00000422883

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    hsa-miR-520e hsa-miR-607 hsa-miR-3146 hsa-miR-199a-3p hsa-miR-128 hsa-miR-3653 hsa-miR-578 hsa-miR-519a
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    Additional cDNA sequence: 

    AB033038.2 AB125644.1 AB201172.1 AF112218.1 AK001254.1 AK024717.1 AK025723.1 AK124603.1 
    AK299823.1 AK307964.1 BC014905.1 BC015539.1 BC032683.1 BC041160.1 BC045829.1 BC056885.1 
    BC060037.1 BC078168.1 BC092515.1 BC132736.1 BC142646.1 BC142700.1 BC144320.1 BX537985.1 
    BX538154.1 BX647874.1 BX648138.1 D64159.1 

    19 DOTS entries:

    DT.40271507  DT.95099688  DT.40119135  DT.91911308  DT.100645964  DT.306982  DT.120951222  DT.86853997 
    DT.100645965  DT.120951189  DT.75149823  DT.97819542  DT.120951263  DT.451778  DT.91663454  DT.95303896 
    DT.120951243  DT.91922408  DT.97790164 

    GeneLoc Exon Structure

    5/13 Alternative Splicing Database (ASD) splice patterns (SP) for CCDC88A (see all 13)    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b · 13c ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ 18a · 18b ^ 19 ^ 20 ^ 21a · 21b ^
    SP1:                                                                                                                    -                                       
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                      -                     

    ExUns: 22a · 22b ^ 23 ^ 24 ^ 25a · 25b · 25c ^ 26 ^ 27 ^ 28 ^ 29 ^ 30a · 30b ^ 31a · 31b ^ 32a · 32b · 32c · 32d ^ 33 ^ 34 ^ 35a · 35b
    SP1:  -                                                                       -     -                                                         
    SP2:  -                                               -                       -     -                             -           -               
    SP3:  -                                               -                       -     -                             -                           
    SP4:                                                                                                                                          
    SP5:  -                                               -                       -     -                                                         


    ECgene alternative splicing isoforms for CCDC88A

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CCDC88A expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTGAGATATT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    CCDC88A expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LungTracheaBasal CellsLung
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See CCDC88A Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CCDC88A

    SOURCE GeneReport for Unigene cluster: Hs.292925

    UniProtKB/Swiss-Prot: GRDN_HUMAN, Q3V6T2
    Tissue specificity: Expressed ubiquitously

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CCDC88A gene from 6/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CCDC88A1 coiled-coil domain containing 88A 79.51(n)
    82.99(a)
      421210  XM_003640878.1  XP_003640926.1 
    lizard
    (Anolis carolinensis)
    Reptilia CCDC88A6
    --
    84(a)
    1 ↔ 1
    1(255800999-255896794)
    zebrafish
    (Danio rerio)
    Actinopterygii BX324134.16
    --
    57(a)
    1 ↔ 1
    6(6218335-6262806)
    fruit fly
    (Drosophila melanogaster)
    Insecta Girdin6
    Girdin
    22(a)
    1 → many
    3L(3178930-3185287)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT4G315706
    uncharacterized protein
    6(a)
    1 → many
    4(15297014-15306410)
    rice
    (Oryza sativa)
    Liliopsida --
    expressed protein
    7(a)
    1 → many
    2(2656063-2659126)


    ENSEMBL Gene Tree for CCDC88A (if available)
    TreeFam Gene Tree for CCDC88A (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CCDC88A gene
    HOOK22  HOOK12  CCDC88C2  HOOK32  CCDC88B2  
    3 SIMAP similar genes for CCDC88A using alignment to 10 protein entries:     GRDN_HUMAN (see all proteins):
    KIAA1212    CCDC88C    CCDC88B

    CCDC88A for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2616 NCBI SNPs in CCDC88A are shown (see all 2616    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs596951611,2
    C,F,--55249599(+) ATACTC/TGGTAT 3 -- ds50013Minor allele frequency- T:0.21WA CSA 122
    rs118999211,2
    C,F,H,--55249722(+) CCTTAT/CAGTGA 3 -- ds500113Minor allele frequency- C:0.09NS EA NA WA CSA 1318
    rs126213381,2
    H--55250055(+) CTTGGT/GTTTAT 3 -- ut314Minor allele frequency- G:0.00NS EA 418
    rs10629361,2
    H--55250278(-) TAATAT/AAAAAG 3 -- ut31 ese36Minor allele frequency- A:0.00MN NS EA NA 566
    rs1137028481,2
    --55250319(+) TACAAC/TGGTAG 3 -- ut311Minor allele frequency- T:0.50CSA 2
    rs1153270431,2
    C,F,--55250362(+) AAAAGA/GCAATT 3 -- ut311Minor allele frequency- G:0.03WA 118
    rs10456581,2
    H--55250387(-) CACCCT/CTCAAC 3 -- ut31 ese36Minor allele frequency- C:0.00MN NS EA NA 602
    rs749716921,2
    --55251254(+) TCAGGG/CTCAGC 3 -- ut311Minor allele frequency- C:0.01NA 120
    rs774903091,2
    --55251262(+) AGCCTA/GCTCAG 3 -- ut311Minor allele frequency- G:0.01WA 118
    rs753148591,2
    C,F,--55251326(+) CTTAAC/TCCAGC 3 -- ut311Minor allele frequency- T:0.09WA 118

    HapMap Linkage Disequilibrium report for CCDC88A (55514978 - 55647057 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CCDC88A: --

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CCDC88A for disorders           About GeneDecksing

    OMIM gene information: 609736    OMIM disorders: --

    5 diseases for CCDC88A:    About MalaCards
    colon cancer    breast cancer    glioblastoma    schizophrenia
    neuronitis

    1 Novoseek disease relationship for CCDC88A gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cancer 0 3 20515748 (3), 18316593 (1)

    Human Genome Epidemiology (HuGE) Navigator: CCDC88A (1 document)

    Export disorders for CCDC88A gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CCDC88A gene, integrated from 9 sources (see all 48):
    (articles sorted by number of sources associating them with CCDC88A)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification and characterization of GIV, a novel Galpha i/s- interacting protein found on COPI, endoplasmic reticulum-Golgi transport vesicles. (PubMed id 15749703)1, 2, 3 Le-Niculescu H.... Farquhar M.G. (2005)
    2. A novel hook-related protein family and the characterization of hook- related protein 1. (PubMed id 15882442)1, 2, 9 Simpson F.... Wicking C. (2005)
    3. Akt/PKB regulates actin organization and cell motility via Girdin/APE. (PubMed id 16139227)1, 2, 9 Enomoto A.... Takahashi M. (2005)
    4. A novel protein kinase B (PKB)/AKT-binding protein enhances PKB kinase activity and regulates DNA synthesis. (PubMed id 15753085)1, 3 Anai M....Asano T. (2005)
    5. An actin-binding protein Girdin regulates the motility of breast cancer cells. (PubMed id 18316593)1, 9 Jiang P....Takahashi M. (2008)
    6. dGirdin a new player of Akt /PKB signaling in Drosoph ila Melanogaster. (PubMed id 20515748)1, 9 Yamaguchi M....Takahashi M. (2010)
    7. A structural determinant that renders G alpha(i) sens itive to activation by GIV/girdin is required to promote cell migration. (PubMed id 20157114)1, 9 Garcia-Marcos M....Farquhar M.G. (2010)
    8. GIV is a nonreceptor GEF for G alpha i with a unique motif that regulates Akt signaling. (PubMed id 19211784)1, 9 Garcia-Marcos M....Farquhar M.G. (2009)
    9. Activation of Galphai3 triggers cell migration via regulation of GIV. (PubMed id 18663145)1, 9 Ghosh P....Farquhar M.G. (2008)
    10. Charting the landscape of tandem BRCT domain-mediated protein interactions. (PubMed id 22990118)1 Woods N.T....Monteiro A.N. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 55704 HGNC: 25523 Ensembl:ENSG00000115355 euGenes: HUgn55704 ECgene: CCDC88A
    H-InvDB: CCDC88A

    (According to HUGE)
    About This Section
    HUGE: KIAA1212

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CCDC88A Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CCDC88A gene:
    Search GeneIP for patents involving CCDC88A

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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