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Aliases for CCDC37-AS1 Gene

Subcategory (RNA class) for CCDC37-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CCDC37-AS1 Gene

  • CCDC37 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for CCDC37-AS1 Gene

Previous GeneCards Identifiers for CCDC37-AS1 Gene

  • GC03M126084

Summaries for CCDC37-AS1 Gene

GeneCards Summary for CCDC37-AS1 Gene

CCDC37-AS1 (CCDC37 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CCDC37-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC37-AS1 Gene

Genomics for CCDC37-AS1 Gene

Regulatory Elements for CCDC37-AS1 Gene

Enhancers for CCDC37-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H126388 1.2 Ensembl ENCODE 23.5 +5.5 5461 1 ATF1 FOXA2 ARNT ARID4B SIN3A ZBTB7B YY1 ZNF121 ZNF143 ATF7 CCDC37-AS1 KLF15
GH03H126266 1.4 Ensembl ENCODE dbSUPER 10 +126.9 126939 3 ATF1 ARID4B SIN3A DMAP1 YY1 FOS ATF7 MXD4 REST SMARCB1 KLF15 CCDC37-AS1 CFAP100 ALDH1L1 ALDH1L1-AS2 ENPP7P4 ENSG00000250934 ENSG00000251448
GH03H126373 0.8 ENCODE dbSUPER 16 +20.7 20738 0 ZFP64 HNF4A RAD21 NR2F2 CCDC37-AS1 CFAP100 KLF15
GH03H126420 0.5 ENCODE 12.7 -25.8 -25782 0 SAP130 ETV4 THRB RARA RXRB CFAP100 CCDC37-AS1 LOC105374089
GH03H126364 0.4 dbSUPER 5.1 +30.4 30448 0 ZIC2 CCDC37-AS1 KLF15
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCDC37-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCDC37-AS1 Gene

Chromosome:
3
Start:
126,393,032 bp from pter
End:
126,394,851 bp from pter
Size:
1,820 bases
Orientation:
Minus strand

Genomic View for CCDC37-AS1 Gene

Genes around CCDC37-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC37-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC37-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC37-AS1 Gene

Proteins for CCDC37-AS1 Gene

Post-translational modifications for CCDC37-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC37-AS1 Gene

Domains & Families for CCDC37-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC37-AS1 Gene

Function for CCDC37-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC37-AS1 Gene

Localization for CCDC37-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCDC37-AS1 Gene

Pathways & Interactions for CCDC37-AS1 Gene

SuperPathways for CCDC37-AS1 Gene

No Data Available

Interacting Proteins for CCDC37-AS1 Gene

Gene Ontology (GO) - Biological Process for CCDC37-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC37-AS1 Gene

Drugs & Compounds for CCDC37-AS1 Gene

No Compound Related Data Available

Transcripts for CCDC37-AS1 Gene

mRNA/cDNA for CCDC37-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC37-AS1 Gene

No ASD Table

Relevant External Links for CCDC37-AS1 Gene

GeneLoc Exon Structure for
CCDC37-AS1
ECgene alternative splicing isoforms for
CCDC37-AS1

Expression for CCDC37-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCDC37-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC37-AS1 Gene

This gene is overexpressed in Testis (x52.0).
genes like me logo Genes that share expression patterns with CCDC37-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC37-AS1 Gene

Orthologs for CCDC37-AS1 Gene

Evolution for CCDC37-AS1 Gene

ENSEMBL:
Gene Tree for CCDC37-AS1 (if available)
TreeFam:
Gene Tree for CCDC37-AS1 (if available)

No data available for Orthologs for CCDC37-AS1 Gene

Paralogs for CCDC37-AS1 Gene

No data available for Paralogs for CCDC37-AS1 Gene

Variants for CCDC37-AS1 Gene

Sequence variations from dbSNP and Humsavar for CCDC37-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000066893 -- 126,392,622(+) TTCCC(A/G)AGAGC intron-variant, upstream-variant-2KB
rs1001161453 -- 126,395,608(+) ATGGT(A/G)AGAGG intron-variant, upstream-variant-2KB
rs1001318261 -- 126,395,810(+) GGGTG(C/G)GAGAG intron-variant, upstream-variant-2KB
rs1001432553 -- 126,396,410(+) TAGAA(G/T)CATCA intron-variant, upstream-variant-2KB
rs1002320920 -- 126,394,770(+) GTGCC(C/T)AGAGC nc-transcript-variant, upstream-variant-2KB

Relevant External Links for CCDC37-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC37-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC37-AS1 Gene

Disorders for CCDC37-AS1 Gene

Relevant External Links for CCDC37-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CCDC37-AS1

No disorders were found for CCDC37-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC37-AS1 Gene

Publications for CCDC37-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for CCDC37-AS1 Gene

Sources for CCDC37-AS1 Gene

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