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Aliases for CCDC26 Gene

Subcategory (RNA class) for CCDC26 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for CCDC26 Gene

  • CCDC26 Long Non-Coding RNA 2 3
  • Retinoic Acid Modulator 2 3 4
  • RAM 3 4 6
  • Coiled-Coil Domain Containing 26 2 3
  • CCD26 6

External Ids for CCDC26 Gene

ORGUL Members for CCDC26 Gene

Previous GeneCards Identifiers for CCDC26 Gene

  • GC08M130434
  • GC08U901094

Summaries for CCDC26 Gene

GeneCards Summary for CCDC26 Gene

CCDC26 (CCDC26 Long Non-Coding RNA) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC26 Gene

Genomics for CCDC26 Gene

Genomic Location for CCDC26 Gene

Start:
129,351,691 bp from pter
End:
129,680,239 bp from pter
Size:
328,549 bases
Orientation:
Minus strand

Genomic View for CCDC26 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC26 Gene

No data available for Regulatory Elements for CCDC26 Gene

Proteins for CCDC26 Gene

  • Protein details for CCDC26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAB7-CCD26_HUMAN
    Recommended name:
    Putative coiled-coil domain-containing protein 26
    Protein Accession:
    Q8TAB7
    Secondary Accessions:

    Protein attributes for CCDC26 Gene

    Size:
    109 amino acids
    Molecular mass:
    13192 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC26 Gene

Proteomics data for CCDC26 Gene at MOPED

Post-translational modifications for CCDC26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC26 Gene

Domains for CCDC26 Gene

Protein Domains for CCDC26 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CCDC26 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC26: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC26 Gene

Function for CCDC26 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC26 Gene

Localization for CCDC26 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CCDC26 Gene COMPARTMENTS Subcellular localization image for CCDC26 gene
Compartment Confidence
extracellular 2
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CCDC26 Gene

Pathways for CCDC26 Gene

SuperPathways for CCDC26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC26 Gene

None

No data available for Pathways by source for CCDC26 Gene

Transcripts for CCDC26 Gene

mRNA/cDNA for CCDC26 Gene

Unigene Clusters for CCDC26 Gene

Coiled-coil domain containing 26:
Representative Sequences:

miRNA Products

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for CCDC26

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC26 Gene

No ASD Table

Relevant External Links for CCDC26 Gene

GeneLoc Exon Structure for
CCDC26
ECgene alternative splicing isoforms for
CCDC26

Expression for CCDC26 Gene

mRNA expression in normal human tissues for CCDC26 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC26 Gene

This gene is overexpressed in Spleen (9.0) and Brain - Spinal cord (cervical c-1) (6.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CCDC26 Gene

SOURCE GeneReport for Unigene cluster for CCDC26 Gene Hs.679457

mRNA Expression by UniProt/SwissProt for CCDC26 Gene

Q8TAB7-CCD26_HUMAN
Tissue specificity: Based on cell line studies, may be restricted to the myelocyte-monocyte lineage.
genes like me logo Genes that share expressions with CCDC26: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for CCDC26 Gene

Orthologs for CCDC26 Gene

Evolution for CCDC26 Gene

ENSEMBL:
Gene Tree for CCDC26 (if available)
TreeFam:
Gene Tree for CCDC26 (if available)

No data available for Orthologs for CCDC26 Gene

Paralogs for CCDC26 Gene

No data available for Paralogs for CCDC26 Gene

Variants for CCDC26 Gene

Sequence variations from dbSNP and Humsavar for CCDC26 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs2082548 -- 129,598,149(+) CTTTC(A/C/G)AGTGG intron-variant
rs2568429 -- 129,369,627(-) acccc(A/C/G)cctct intron-variant
rs3076812 -- 129,398,615(+) ACACA(-/CA)TATAA intron-variant
rs3076954 -- 129,551,978(+) GTGTG(-/TG)AATTT intron-variant
rs10635675 -- 129,553,413(+) TGTGG(-/TA/TATA)TATAT intron-variant

Relevant External Links for CCDC26 Gene

HapMap Linkage Disequilibrium report
CCDC26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CCDC26 Gene

Disorders for CCDC26 Gene

(1) University of Copenhagen DISEASES for CCDC26 Gene

Relevant External Links for CCDC26

Genetic Association Database (GAD)
CCDC26
Human Genome Epidemiology (HuGE) Navigator
CCDC26
genes like me logo Genes that share disorders with CCDC26: view

No data available for UniProtKB/Swiss-Prot for CCDC26 Gene

Publications for CCDC26 Gene

  1. Co-resistance to retinoic acid and TRAIL by insertion mutagenesis into RAM. (PMID: 16449964) Yin W. … Gronemeyer H. (Oncogene 2006) 2 3 4 23
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Genome-wide association study identifies five susceptibility loci for glioma. (PMID: 19578367) Shete S. … Houlston R.S. (Nat. Genet. 2009) 3 48
  4. Interaction between 5 genetic variants and allergy in glioma risk. (PMID: 20462933) Schoemaker M.J. … Swerdlow A.J. (Am. J. Epidemiol. 2010) 3 48
  5. Genetic risk profiles identify different molecular etiologies for glioma. (PMID: 20847058) Simon M. … Sanson M. (Clin. Cancer Res. 2010) 3 48

Products for CCDC26 Gene

Sources for CCDC26 Gene

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