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Aliases for CCDC26 Gene

Subcategory (RNA class) for CCDC26 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CCDC26 Gene

  • CCDC26 Long Non-Coding RNA 2 3 5
  • Retinoic Acid Modulator 2 3 4
  • Coiled-Coil Domain Containing 26 2 3
  • RAM 3 4

External Ids for CCDC26 Gene

Previous GeneCards Identifiers for CCDC26 Gene

  • GC08M130434
  • GC08U901094

Summaries for CCDC26 Gene

GeneCards Summary for CCDC26 Gene

CCDC26 (CCDC26 Long Non-Coding RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CCDC26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC26 Gene

Genomics for CCDC26 Gene

Regulatory Elements for CCDC26 Gene

Enhancers for CCDC26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H129681 1.4 Ensembl ENCODE dbSUPER 0.7 -2.6 -2560 2 HDAC1 PKNOX1 ATF1 NFIB ARNT SIN3A ZBTB40 RAD21 YY1 RFX5 CCDC26 ENSG00000254223
GH08H129678 1 ENCODE dbSUPER 0.7 +0.7 697 1 BRD4 PKNOX1 MAX EBF1 RELA L3MBTL2 CAVIN1 CEBPB SMARCB1 ZNF592 CCDC26 GC08M129606
GH08H129666 1 FANTOM5 Ensembl ENCODE 0.4 +13.8 13777 0 HLF MAX MYC FAM49B CCDC26 GC08M129606
GH08H129680 0.5 ENCODE 0.7 -0.5 -511 0 BCOR PKNOX1 ZMYM3 NFE2 CCDC26 ENSG00000254223
GH08H129676 0.5 Ensembl 0.7 +3.4 3439 0 JUND ATF2 SPI1 CCDC26 GC08M129606
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCDC26 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCDC26 Gene

Chromosome:
8
Start:
129,351,691 bp from pter
End:
129,680,239 bp from pter
Size:
328,549 bases
Orientation:
Minus strand

Genomic View for CCDC26 Gene

Genes around CCDC26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC26 Gene

Proteins for CCDC26 Gene

  • Protein details for CCDC26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAB7-CCD26_HUMAN
    Recommended name:
    Putative coiled-coil domain-containing protein 26
    Protein Accession:
    Q8TAB7

    Protein attributes for CCDC26 Gene

    Size:
    109 amino acids
    Molecular mass:
    13192 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC26 Gene

Post-translational modifications for CCDC26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC26 Gene

Domains & Families for CCDC26 Gene

Protein Domains for CCDC26 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CCDC26 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC26: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC26 Gene

Function for CCDC26 Gene

Phenotypes From GWAS Catalog for CCDC26 Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CCDC26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC26 Gene

Localization for CCDC26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCDC26 Gene

Pathways & Interactions for CCDC26 Gene

SuperPathways for CCDC26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC26 Gene

Drugs & Compounds for CCDC26 Gene

No Compound Related Data Available

Transcripts for CCDC26 Gene

mRNA/cDNA for CCDC26 Gene

Unigene Clusters for CCDC26 Gene

Coiled-coil domain containing 26:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CCDC26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC26 Gene

No ASD Table

Relevant External Links for CCDC26 Gene

GeneLoc Exon Structure for
CCDC26
ECgene alternative splicing isoforms for
CCDC26

Expression for CCDC26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCDC26 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC26 Gene

This gene is overexpressed in Spleen (x9.0) and Brain - Spinal cord (cervical c-1) (x6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CCDC26 Gene



NURSA nuclear receptor signaling pathways regulating expression of CCDC26 Gene:

CCDC26

SOURCE GeneReport for Unigene cluster for CCDC26 Gene:

Hs.679457

mRNA Expression by UniProt/SwissProt for CCDC26 Gene:

Q8TAB7-CCD26_HUMAN
Tissue specificity: Based on cell line studies, may be restricted to the myelocyte-monocyte lineage.
genes like me logo Genes that share expression patterns with CCDC26: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC26 Gene

Orthologs for CCDC26 Gene

Evolution for CCDC26 Gene

ENSEMBL:
Gene Tree for CCDC26 (if available)
TreeFam:
Gene Tree for CCDC26 (if available)

No data available for Orthologs for CCDC26 Gene

Paralogs for CCDC26 Gene

No data available for Paralogs for CCDC26 Gene

Variants for CCDC26 Gene

Sequence variations from dbSNP and Humsavar for CCDC26 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000014781 -- 129,642,102(+) GAATA(A/T)ATAGA intron-variant
rs1000015280 -- 129,469,941(+) CGAGA(-/CT)CTCTC intron-variant
rs1000022360 -- 129,527,643(+) CCAGC(A/C)CTTTG intron-variant
rs1000031505 -- 129,654,443(+) GGTTT(A/C)AGATT intron-variant
rs1000047110 -- 129,489,385(+) CTCAG(A/T)AGAAA intron-variant

Relevant External Links for CCDC26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC26 Gene

Disorders for CCDC26 Gene

Relevant External Links for CCDC26

Genetic Association Database (GAD)
CCDC26
Human Genome Epidemiology (HuGE) Navigator
CCDC26
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CCDC26

No disorders were found for CCDC26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC26 Gene

Publications for CCDC26 Gene

  1. Co-resistance to retinoic acid and TRAIL by insertion mutagenesis into RAM. (PMID: 16449964) Yin W … Gronemeyer H (Oncogene 2006) 2 3 4 22 60
  2. Deciphering the 8q24.21 association for glioma. (PMID: 23399484) Enciso-Mora V … Houlston RS (Human molecular genetics 2013) 2 3 60
  3. Genetic risk profiles identify different molecular etiologies for glioma. (PMID: 20847058) Simon M … Sanson M (Clinical cancer research : an official journal of the American Association for Cancer Research 2010) 3 45 60
  4. Interaction between 5 genetic variants and allergy in glioma risk. (PMID: 20462933) Schoemaker MJ … Swerdlow AJ (American journal of epidemiology 2010) 3 45 60
  5. Genome-wide association study identifies five susceptibility loci for glioma. (PMID: 19578367) Shete S … Houlston RS (Nature genetics 2009) 3 45 60

Products for CCDC26 Gene

Sources for CCDC26 Gene

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