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Aliases for CCDC183 Gene

Aliases for CCDC183 Gene

  • Coiled-Coil Domain Containing 183 2 3
  • KIAA1984 2 3 4
  • Coiled-Coil Domain-Containing Protein 183 3
  • BA216L13.7 3
  • PARF 3

External Ids for CCDC183 Gene

Previous HGNC Symbols for CCDC183 Gene

  • KIAA1984

Previous GeneCards Identifiers for CCDC183 Gene

  • GC09P139691

Summaries for CCDC183 Gene

GeneCards Summary for CCDC183 Gene

CCDC183 (Coiled-Coil Domain Containing 183) is a Protein Coding gene. An important paralog of this gene is ENSG00000272896.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC183 Gene

Genomics for CCDC183 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CCDC183 Gene

Start:
136,796,338 bp from pter
End:
136,807,741 bp from pter
Size:
11,404 bases
Orientation:
Plus strand

Genomic View for CCDC183 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC183 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC183 Gene

No data available for Regulatory Elements for CCDC183 Gene

Proteins for CCDC183 Gene

  • Protein details for CCDC183 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T5S1-CC183_HUMAN
    Recommended name:
    Coiled-coil domain-containing protein 183
    Protein Accession:
    Q5T5S1
    Secondary Accessions:
    • B2RP89
    • C9JD38
    • Q6P2D9
    • Q8NAI4
    • Q8TF18

    Protein attributes for CCDC183 Gene

    Size:
    534 amino acids
    Molecular mass:
    62689 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB85570.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=CAI12681.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for CCDC183 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CCDC183 Gene

Proteomics data for CCDC183 Gene at MOPED

Post-translational modifications for CCDC183 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CCDC183 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CCDC183 Gene

Domains for CCDC183 Gene

Protein Domains for CCDC183 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC183: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC183 Gene

Function for CCDC183 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC183

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC183 Gene

Localization for CCDC183 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC183 Gene

Pathways for CCDC183 Gene

SuperPathways for CCDC183 Gene

No Data Available

Interacting Proteins for CCDC183 Gene

Gene Ontology (GO) - Biological Process for CCDC183 Gene

None

No data available for Pathways by source for CCDC183 Gene

Transcripts for CCDC183 Gene

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC183

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for CCDC183
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC183 Gene

No ASD Table

Relevant External Links for CCDC183 Gene

GeneLoc Exon Structure for
CCDC183
ECgene alternative splicing isoforms for
CCDC183

Expression for CCDC183 Gene

mRNA expression in normal human tissues for CCDC183 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC183 Gene

This gene is overexpressed in Testis (8.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for CCDC183 Gene

genes like me logo Genes that share expressions with CCDC183: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CCDC183 Gene

Orthologs for CCDC183 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CCDC183 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CCDC183 35
  • 98.45 (n)
  • 96.97 (a)
CCDC183 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CCDC183 35
  • 84.07 (n)
  • 78.2 (a)
KIAA1984 36
  • 78 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 76 (a)
OneToMany
KIAA1984 35
  • 83.49 (n)
  • 76.22 (a)
mouse
(Mus musculus)
Mammalia 4921530D09Rik 16
4921530D09Rik 36
  • 76 (a)
OneToMany
Cccd183 35
  • 79.96 (n)
  • 75.76 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 49 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 43 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Ccdc183 35
  • 79.52 (n)
  • 75.19 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 38 (a)
OneToMany
KIAA1984 35
  • 56.24 (n)
  • 40.91 (a)
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 40 (a)
OneToMany
Species with no ortholog for CCDC183:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CCDC183 Gene

ENSEMBL:
Gene Tree for CCDC183 (if available)
TreeFam:
Gene Tree for CCDC183 (if available)

Paralogs for CCDC183 Gene

Paralogs for CCDC183 Gene

Selected SIMAP similar genes for CCDC183 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with CCDC183: view

Variants for CCDC183 Gene

Sequence variations from dbSNP and Humsavar for CCDC183 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs945386 - 136,799,144(+) GAATA(C/T)GGACC missense, reference
rs945387 -- 136,799,540(+) CGCCT(C/T)CGAAC intron-variant
rs1055995 -- 136,796,388(+) GGCCT(A/G)AGAGC utr-variant-5-prime
rs1537794 -- 136,799,999(+) CGACC(A/C)ACTGG intron-variant
rs2492305 -- 136,803,024(-) TGGCC(C/T)TGGGG intron-variant

Relevant External Links for CCDC183 Gene

HapMap Linkage Disequilibrium report
CCDC183

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CCDC183 Gene

Disorders for CCDC183 Gene

No disorders were found for CCDC183 Gene.

No data available for UniProtKB/Swiss-Prot for CCDC183 Gene

Publications for CCDC183 Gene

  1. Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins. (PMID: 11853319) Nagase T. … Ohara O. (DNA Res. 2001) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Identification of novel ARF binding proteins by two-hybrid screening. (PMID: 16582619) Tompkins V. … Quelle D.E. (Cell Cycle 2006) 3
  5. Single nucleotide polymorphisms of matrix metalloproteinase 9 (MMP9) and tumor protein 73 (TP73) interact with Epstein-Barr virus in chronic lymphocytic leukemia: results from the European case-control study EpiLymph. (PMID: 21048031) Casabonne D. … de Sanjose S. (Haematologica 2011) 3

Products for CCDC183 Gene

Sources for CCDC183 Gene

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