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Aliases for CCDC179 Gene

Aliases for CCDC179 Gene

  • Coiled-Coil Domain Containing 179 2 3

External Ids for CCDC179 Gene

Summaries for CCDC179 Gene

GeneCards Summary for CCDC179 Gene

CCDC179 (Coiled-Coil Domain Containing 179) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC179 Gene

Genomics for CCDC179 Gene

Genomic Location for CCDC179 Gene

Start:
22,846,922 bp from pter
End:
22,860,426 bp from pter
Size:
13,505 bases
Orientation:
Minus strand

Genomic View for CCDC179 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC179 Gene

No data available for Regulatory Elements for CCDC179 Gene

Proteins for CCDC179 Gene

  • Protein details for CCDC179 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    H3BU77-CC179_HUMAN
    Recommended name:
    Coiled-coil domain-containing protein 179
    Protein Accession:
    H3BU77
    Secondary Accessions:

    Protein attributes for CCDC179 Gene

    Size:
    68 amino acids
    Molecular mass:
    8104 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC179 Gene

Proteomics data for CCDC179 Gene at MOPED

Post-translational modifications for CCDC179 Gene

No Post-translational modifications

Other Protein References for CCDC179 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CCDC179 Gene

Domains for CCDC179 Gene

Protein Domains for CCDC179 Gene

ProtoNet:
genes like me logo Genes that share domains with CCDC179: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC179 Gene

Function for CCDC179 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC179 Gene

Localization for CCDC179 Gene

No data available for Gene Ontology (GO) - Cellular Components for CCDC179 Gene

Pathways for CCDC179 Gene

SuperPathways for CCDC179 Gene

No Data Available

Interacting Proteins for CCDC179 Gene

Gene Ontology (GO) - Biological Process for CCDC179 Gene

None

No data available for Pathways by source for CCDC179 Gene

Transcripts for CCDC179 Gene

mRNA/cDNA for CCDC179 Gene

(4) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC179 Gene

Coiled-coil domain containing 179:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC179 Gene

No ASD Table

Relevant External Links for CCDC179 Gene

GeneLoc Exon Structure for
CCDC179
ECgene alternative splicing isoforms for
CCDC179

Expression for CCDC179 Gene

mRNA expression in normal human tissues for CCDC179 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC179 Gene

This gene is overexpressed in Testis (51.9).

SOURCE GeneReport for Unigene cluster for CCDC179 Gene Hs.555029

genes like me logo Genes that share expressions with CCDC179: view

Orthologs for CCDC179 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CCDC179 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC100610029 36
  • 94.87 (n)
  • 89.23 (a)
dog
(Canis familiaris)
Mammalia CCDC179 37
  • 64 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1700015G11Rik 37
  • 63 (a)
OneToOne
Species with no ortholog for CCDC179:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CCDC179 Gene

ENSEMBL:
Gene Tree for CCDC179 (if available)
TreeFam:
Gene Tree for CCDC179 (if available)

Paralogs for CCDC179 Gene

No data available for Paralogs for CCDC179 Gene

Variants for CCDC179 Gene

Sequence variations from dbSNP and Humsavar for CCDC179 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs1024709 -- 22,850,893(-) TATAA(A/C)GTATC intron-variant
rs1056239 -- 22,857,973(-) AGGAG(A/T)CTGAA reference, missense
rs1468646 -- 22,849,602(-) TACAG(A/C)AAAAT intron-variant
rs1860678 -- 22,859,996(-) GGAGT(C/T)ATTTA intron-variant
rs1990424 -- 22,861,090(-) AGGTG(G/T)AGGTA upstream-variant-2KB

Relevant External Links for CCDC179 Gene

HapMap Linkage Disequilibrium report
CCDC179

No data available for Structural Variations from Database of Genomic Variants (DGV) for CCDC179 Gene

Disorders for CCDC179 Gene

No disorders were found for CCDC179 Gene.

No data available for UniProtKB/Swiss-Prot for CCDC179 Gene

Publications for CCDC179 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for CCDC179 Gene

Sources for CCDC179 Gene

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