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Aliases for CCDC175 Gene

Aliases for CCDC175 Gene

  • Coiled-Coil Domain Containing 175 2 3
  • C14orf38 3 4
  • Coiled-Coil Domain-Containing Protein 175 3
  • Chromosome 14 Open Reading Frame 38 2
  • C14_5395 3

External Ids for CCDC175 Gene

Previous HGNC Symbols for CCDC175 Gene

  • C14orf38

Previous GeneCards Identifiers for CCDC175 Gene

  • GC14M059971

Summaries for CCDC175 Gene

GeneCards Summary for CCDC175 Gene

CCDC175 (Coiled-Coil Domain Containing 175) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC175 Gene

Genomics for CCDC175 Gene

Genomic Location for CCDC175 Gene

Start:
59,504,539 bp from pter
End:
59,576,831 bp from pter
Size:
72,293 bases
Orientation:
Minus strand

Genomic View for CCDC175 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC175 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC175 Gene

No data available for Regulatory Elements for CCDC175 Gene

Proteins for CCDC175 Gene

  • Protein details for CCDC175 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C221-CC175_HUMAN
    Recommended name:
    Coiled-coil domain-containing protein 175
    Protein Accession:
    P0C221
    Secondary Accessions:
    • G3V5J7

    Protein attributes for CCDC175 Gene

    Size:
    793 amino acids
    Molecular mass:
    93626 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC175 Gene

Proteomics data for CCDC175 Gene at MOPED

Post-translational modifications for CCDC175 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CCDC175 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CCDC175 Gene

Domains for CCDC175 Gene

Protein Domains for CCDC175 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC175: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC175 Gene

Function for CCDC175 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC175 Gene

Localization for CCDC175 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC175 Gene

Pathways for CCDC175 Gene

SuperPathways for CCDC175 Gene

No Data Available

Interacting Proteins for CCDC175 Gene

Gene Ontology (GO) - Biological Process for CCDC175 Gene

None

No data available for Pathways by source for CCDC175 Gene

Transcripts for CCDC175 Gene

mRNA/cDNA for CCDC175 Gene

(13) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC175 Gene

Coiled-coil domain containing 175:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC175

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC175 Gene

No ASD Table

Relevant External Links for CCDC175 Gene

GeneLoc Exon Structure for
CCDC175
ECgene alternative splicing isoforms for
CCDC175

Expression for CCDC175 Gene

mRNA expression in normal human tissues for CCDC175 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC175 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (11.3) and Brain - Cerebellum (10.8).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CCDC175 Gene

SOURCE GeneReport for Unigene cluster for CCDC175 Gene Hs.29706

genes like me logo Genes that share expressions with CCDC175: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CCDC175 Gene

Orthologs for CCDC175 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CCDC175 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CCDC175 35
  • 99.08 (n)
  • 98.23 (a)
CCDC175 36
  • 92 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CCDC175 35
  • 77.5 (n)
  • 64.57 (a)
CCDC175 36
  • 63 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CCDC175 35
  • 77.9 (n)
  • 64.14 (a)
CCDC175 36
  • 64 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ccdc175 35
  • 66.97 (n)
  • 51.11 (a)
Ccdc175 16
Ccdc175 36
  • 48 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CCDC175 36
  • 33 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CCDC175 36
  • 26 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ccdc175 35
  • 68.01 (n)
  • 53.58 (a)
chicken
(Gallus gallus)
Aves CCDC175 36
  • 25 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii ccdc175 36
  • 20 (a)
OneToOne
Species with no ortholog for CCDC175:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CCDC175 Gene

ENSEMBL:
Gene Tree for CCDC175 (if available)
TreeFam:
Gene Tree for CCDC175 (if available)

Paralogs for CCDC175 Gene

No data available for Paralogs for CCDC175 Gene

Variants for CCDC175 Gene

Sequence variations from dbSNP and Humsavar for CCDC175 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs725951 -- 59,506,835(-) ATCAA(C/T)GTATA intron-variant
rs725952 -- 59,506,783(-) ATACA(A/G)TCATC intron-variant
rs743164 -- 59,506,149(-) GACAA(A/C)TATAT intron-variant
rs761928 -- 59,506,165(-) CAAAC(C/T)AATAG intron-variant
rs956901 -- 59,542,893(-) TTTAC(A/T)ATATA intron-variant

Relevant External Links for CCDC175 Gene

HapMap Linkage Disequilibrium report
CCDC175

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CCDC175 Gene

Disorders for CCDC175 Gene

No disorders were found for CCDC175 Gene.

No data available for UniProtKB/Swiss-Prot for CCDC175 Gene

Publications for CCDC175 Gene

  1. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R. … Weissenbach J. (Nature 2003) 3 4
  2. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3

Products for CCDC175 Gene

Sources for CCDC175 Gene

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