Aliases for CCDC166 Gene
External Ids for CCDC166 Gene
- HGNC: 41910
- Entrez Gene: 100130274
- Ensembl: ENSG00000255181
- UniProtKB: P0CW27
Previous GeneCards Identifiers for CCDC166 Gene
- GC08M144789
Summaries for CCDC166 Gene
GeneCards Summary for CCDC166 Gene
CCDC166 (Coiled-Coil Domain Containing 166) is a Protein Coding gene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC166 Gene
Genomics for CCDC166 Gene
Regulatory Element Products
Genomic Location for CCDC166 Gene
- Chromosome:
- 8
- Start:
- 143,706,694 bp from pter
- End:
- 143,708,109 bp from pter
- Size:
- 1,416 bases
- Orientation:
- Minus strand
Genomic View for CCDC166 Gene
Genes around CCDC166 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 8q24.3 by Ensembl
- 8q24.3 by Entrez Gene
- 8q24.3 by HGNC
CCDC166 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CCDC166 Gene
No data available for Regulatory Elements for CCDC166 Gene
Proteins for CCDC166 Gene
-
Protein details for CCDC166 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P0CW27-CC166_HUMAN
- Recommended name:
- Coiled-coil domain-containing protein 166
- Protein Accession:
- P0CW27
Protein attributes for CCDC166 Gene
- Size:
- 439 amino acids
- Molecular mass:
- 48709 Da
- Quaternary structure:
- No Data Available
Protein Expression for CCDC166 Gene
Post-translational modifications for CCDC166 Gene
Other Protein References for CCDC166 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for CCDC166
- Invitrogen Antibodies for CCDC166
- Search GeneTex for Antibodies for CCDC166
Protein Products
-
OriGene Purified Proteins for CCDC166
- Search Origene for MassSpec and Protein Over-expression Lysates for CCDC166
- Origene Custom Protein Services for CCDC166
- Novus Biologicals proteins for CCDC166
- Search GeneTex for Proteins for CCDC166
Assay Products
No data available for DME Specific Peptides for CCDC166 Gene
Domains & Families for CCDC166 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC166 Gene
Function for CCDC166 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCDC166
-
-
ViGene Biosciences lentiviral particle packaged cDNA for CCDC166 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CCDC166 gene
- Search ViGene Biosciences for CCDC166
CRISPR Products
-
OriGene CRISPR knockouts for CCDC166
-
Santa Cruz Biotechnology (SCBT) CRISPR for CCDC166
- GenScript: Design CRISPR guide RNA sequences for CCDC166
miRNA Products
- Search ViGene Biosciences for CCDC166
Inhibitory RNA Products
- Origene RNAi and siRNA products in human, mouse, rat for CCDC166
- Browse OriGene Inhibitory RNA Products For CCDC166
-
ViGene Biosciences ready-to-package AAV shRNAs for CCDC166 gene
Clone Products
-
OriGene ORF clones in human for CCDC166
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- VectorBuilder custom plasmid, inducible vectors for CCDC166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCDC166
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for CCDC166
-
ViGene Biosciences adenoviral particle packaged cDNA for CCDC166 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for CCDC166 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CCDC166 gene
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC166 Gene
Localization for CCDC166 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC166 Gene
Pathways & Interactions for CCDC166 Gene
No Data Available
Interacting Proteins for CCDC166 Gene
No data available for Pathways by source and SIGNOR curated interactions for CCDC166 Gene
Transcripts for CCDC166 Gene
mRNA/cDNA for CCDC166 Gene
- (1) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for CCDC166 Gene
CRISPR Products
-
OriGene CRISPR knockouts for CCDC166
-
Santa Cruz Biotechnology (SCBT) CRISPR for CCDC166
- GenScript: Design CRISPR guide RNA sequences for CCDC166
miRNA Products
- Search ViGene Biosciences for CCDC166
Inhibitory RNA Products
- Origene RNAi and siRNA products in human, mouse, rat for CCDC166
- Browse OriGene Inhibitory RNA Products For CCDC166
-
ViGene Biosciences ready-to-package AAV shRNAs for CCDC166 gene
Clone Products
-
OriGene ORF clones in human for CCDC166
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- VectorBuilder custom plasmid, inducible vectors for CCDC166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCDC166
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CCDC166 Gene
mRNA differential expression in normal tissues according to GTEx for CCDC166 Gene
This gene is overexpressed in Testis (x39.9).
This gene is overexpressed in Nasal epithelium (66.8).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CCDC166 Gene
NURSA nuclear receptor signaling pathways regulating expression of CCDC166 Gene:
CCDC166SOURCE GeneReport for Unigene cluster for CCDC166 Gene:
Hs.730002Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC166 Gene
Orthologs for CCDC166 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | CCDC166 34 |
|
||
| dog (Canis familiaris) |
Mammalia | CCDC166 34 |
|
||
| cow (Bos Taurus) |
Mammalia | CCDC166 34 35 |
|
||
| mouse (Mus musculus) |
Mammalia | Ccdc166 34 16 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Ccdc166 34 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | CCDC166 35 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | LOC100859066 34 |
|
||
| lizard (Anolis carolinensis) |
Reptilia | CCDC166 35 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | LOC101731877 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | LOC100538228 34 |
|
- Species where no ortholog for CCDC166 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for CCDC166 Gene
No data available for Paralogs for CCDC166 Gene
Variants for CCDC166 Gene
| SNP ID | Clin | Chr 08 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1001540393 | -- | 143,708,054(+) | CGGCC(C/G)CCGCA | nc-transcript-variant, reference, missense | |
| rs1001874220 | -- | 143,706,515(+) | GCTCT(C/T)TTGCA | downstream-variant-500B, upstream-variant-2KB | |
| rs1002540127 | -- | 143,709,168(+) | ACAGA(A/C)CCTGT | intron-variant, upstream-variant-2KB | |
| rs1003158765 | -- | 143,708,875(+) | ACCCG(A/C)TCAGC | intron-variant, upstream-variant-2KB | |
| rs1005566324 | -- | 143,706,851(+) | CCCTC(A/G)GTGAG | upstream-variant-2KB, reference, missense |
Gene Damage Index Score:
5.38;
71.03% of all genes are more intolerant (likely to be disease-causing)
Relevant External Links for CCDC166 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CCDC166
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC166 Gene
Disorders for CCDC166 Gene
Relevant External Links for CCDC166
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- CCDC166
No disorders were found for CCDC166 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC166 Gene
Publications for CCDC166 Gene
- DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64
Products for CCDC166 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for CCDC166
- Search Origene for MassSpec and Protein Over-expression Lysates for CCDC166
- Origene Custom Protein Services for CCDC166
- Origene siRNA and RNAi products in human, mouse, rat for CCDC166
- Browse OriGene Inhibitory RNA Products For CCDC166
- Browse OriGene qPCR primer pairs and template standards
- OriGene CRISPR knockouts for CCDC166
- OriGene ORF clones in human for CCDC166
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CCDC166
- GenScript: Next-day shipping cDNA ORF clone for CCDC166 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for CCDC166
- GenScript Custom Assay Services for CCDC166
- GenScript Custom overexpressing Cell Line Services for CCDC166
- GenScript: Design CRISPR guide RNA sequences for CCDC166
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CCDC166
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals Antibodies for CCDC166
- Novus Biologicals proteins for CCDC166
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Invitrogen Antibodies for CCDC166
- ViGene Biosciences adenoviral particle packaged cDNA for CCDC166 gene
- ViGene Biosciences lentiviral particle packaged cDNA for CCDC166 gene
- ViGene Biosciences ready-to-package AAV shRNAs for CCDC166 gene
- Search ViGene Biosciences for CCDC166
- Search Santa Cruz Biotechnology (SCBT) for CCDC166 Antibodies
- Search Santa Cruz Biotechnology (SCBT) for CCDC166 siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for CCDC166
- Horizon Cell Lines for CCDC166
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCDC166
- VectorBuilder custom plasmid, inducible vectors for CCDC166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCDC166
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CCDC166 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer