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Aliases for CCDC166 Gene

Aliases for CCDC166 Gene

  • Coiled-Coil Domain Containing 166 2 3

External Ids for CCDC166 Gene

Previous GeneCards Identifiers for CCDC166 Gene

  • GC08M144789

Summaries for CCDC166 Gene

GeneCards Summary for CCDC166 Gene

CCDC166 (Coiled-Coil Domain Containing 166) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC166 Gene

Genomics for CCDC166 Gene

Genomic Location for CCDC166 Gene

Start:
143,706,694 bp from pter
End:
143,708,109 bp from pter
Size:
1,416 bases
Orientation:
Minus strand

Genomic View for CCDC166 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC166 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC166 Gene

No data available for Regulatory Elements for CCDC166 Gene

Proteins for CCDC166 Gene

  • Protein details for CCDC166 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CW27-CC166_HUMAN
    Recommended name:
    Coiled-coil domain-containing protein 166
    Protein Accession:
    P0CW27
    Secondary Accessions:

    Protein attributes for CCDC166 Gene

    Size:
    439 amino acids
    Molecular mass:
    48709 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC166 Gene

Proteomics data for CCDC166 Gene at MOPED

Post-translational modifications for CCDC166 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CCDC166 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CCDC166 Gene

Domains for CCDC166 Gene

Protein Domains for CCDC166 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC166: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC166 Gene

Function for CCDC166 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC166 Gene

Localization for CCDC166 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC166 Gene

Pathways for CCDC166 Gene

SuperPathways for CCDC166 Gene

No Data Available

Interacting Proteins for CCDC166 Gene

Gene Ontology (GO) - Biological Process for CCDC166 Gene

None

No data available for Pathways by source for CCDC166 Gene

Transcripts for CCDC166 Gene

mRNA/cDNA for CCDC166 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC166 Gene

Coiled-coil domain containing 166:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC166

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC166 Gene

No ASD Table

Relevant External Links for CCDC166 Gene

GeneLoc Exon Structure for
CCDC166
ECgene alternative splicing isoforms for
CCDC166

Expression for CCDC166 Gene

mRNA expression in normal human tissues for CCDC166 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC166 Gene

This gene is overexpressed in Testis (39.9).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CCDC166 Gene

SOURCE GeneReport for Unigene cluster for CCDC166 Gene Hs.730002

genes like me logo Genes that share expressions with CCDC166: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CCDC166 Gene

Orthologs for CCDC166 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CCDC166 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CCDC166 35
  • 99.12 (n)
  • 98.02 (a)
cow
(Bos Taurus)
Mammalia CCDC166 35
  • 76.37 (n)
  • 71.13 (a)
CCDC166 36
  • 66 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CCDC166 35
  • 79.44 (n)
  • 74.8 (a)
mouse
(Mus musculus)
Mammalia Ccdc166 35
  • 71.16 (n)
  • 64.58 (a)
Ccdc166 16
Ccdc166 36
  • 57 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CCDC166 36
  • 52 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ccdc166 35
  • 70.28 (n)
  • 63.13 (a)
chicken
(Gallus gallus)
Aves LOC100859066 35
  • 53.22 (n)
  • 40.74 (a)
lizard
(Anolis carolinensis)
Reptilia CCDC166 36
  • 49 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101731877 35
  • 55.96 (n)
  • 37.8 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC100538228 35
  • 42.88 (n)
  • 27.27 (a)
Species with no ortholog for CCDC166:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CCDC166 Gene

ENSEMBL:
Gene Tree for CCDC166 (if available)
TreeFam:
Gene Tree for CCDC166 (if available)

Paralogs for CCDC166 Gene

No data available for Paralogs for CCDC166 Gene

Variants for CCDC166 Gene

Structural Variations from Database of Genomic Variants (DGV) for CCDC166 Gene

Variant ID Type Subtype PubMed ID
dgv7935n71 CNV Loss 21882294
dgv7938n71 CNV Loss 21882294
dgv7939n71 CNV Loss 21882294
dgv7940n71 CNV Loss 21882294
nsv891747 CNV Loss 21882294
nsv466007 CNV Loss 19166990
nsv519816 CNV Loss 19592680
nsv891751 CNV Loss 21882294
dgv7941n71 CNV Loss 21882294

Relevant External Links for CCDC166 Gene

HapMap Linkage Disequilibrium report
CCDC166

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for CCDC166 Gene

Disorders for CCDC166 Gene

No disorders were found for CCDC166 Gene.

No data available for UniProtKB/Swiss-Prot for CCDC166 Gene

Publications for CCDC166 Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

Products for CCDC166 Gene

Sources for CCDC166 Gene

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