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Aliases for CCDC163P Gene

Aliases for CCDC163P Gene

  • Coiled-Coil Domain Containing 163, Pseudogene 2 3 5
  • Chromosome 1 Open Reading Frame 231 2
  • C1orf231 3

External Ids for CCDC163P Gene

Previous HGNC Symbols for CCDC163P Gene

  • C1orf231

Previous GeneCards Identifiers for CCDC163P Gene

  • GC01M045733
  • GC01M045959
  • GC01M044071

Summaries for CCDC163P Gene

GeneCards Summary for CCDC163P Gene

CCDC163P (Coiled-Coil Domain Containing 163, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC163P Gene

Genomics for CCDC163P Gene

Regulatory Elements for CCDC163P Gene

Enhancers for CCDC163P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CCDC163P on UCSC Golden Path with GeneCards custom track

Promoters for CCDC163P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CCDC163P on UCSC Golden Path with GeneCards custom track

Genomic Location for CCDC163P Gene

Chromosome:
1
Start:
45,493,866 bp from pter
End:
45,500,079 bp from pter
Size:
6,214 bases
Orientation:
Minus strand

Genomic View for CCDC163P Gene

Genes around CCDC163P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC163P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC163P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC163P Gene

Proteins for CCDC163P Gene

  • Protein details for CCDC163P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0D9SEU7
    Recommended name:
    Protein CCDC163P
    Protein Accession:
    A0A0D9SEU7

    Protein attributes for CCDC163P Gene

    Size:
    97 amino acids
    Molecular mass:
    10553 Da
    Quaternary structure:
    No Data Available
  • Protein details for CCDC163P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0D9SF12
    Recommended name:
    Protein CCDC163P
    Protein Accession:
    A0A0D9SF12

    Protein attributes for CCDC163P Gene

    Size:
    145 amino acids
    Molecular mass:
    16203 Da
    Quaternary structure:
    No Data Available
  • Protein details for CCDC163P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0D9SFD8
    Recommended name:
    Protein CCDC163P
    Protein Accession:
    A0A0D9SFD8

    Protein attributes for CCDC163P Gene

    Size:
    66 amino acids
    Molecular mass:
    7236 Da
    Quaternary structure:
    No Data Available
  • Protein details for CCDC163P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0D9SG11
    Recommended name:
    Protein CCDC163P
    Protein Accession:
    A0A0D9SG11

    Protein attributes for CCDC163P Gene

    Size:
    118 amino acids
    Molecular mass:
    13216 Da
    Quaternary structure:
    No Data Available
  • Protein details for CCDC163P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B4DV03
    Recommended name:
    HCG1780060, isoform CRA_b
    Protein Accession:
    B4DV03

    Protein attributes for CCDC163P Gene

    Size:
    118 amino acids
    Molecular mass:
    13258 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC163P Gene

Proteomics data for CCDC163P Gene at MOPED

Post-translational modifications for CCDC163P Gene

No Post-translational modifications

Other Protein References for CCDC163P Gene

No data available for DME Specific Peptides for CCDC163P Gene

Domains & Families for CCDC163P Gene

Protein Domains for CCDC163P Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC163P: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC163P Gene

Function for CCDC163P Gene

Phenotypes for CCDC163P Gene

GenomeRNAi human phenotypes for CCDC163P:
genes like me logo Genes that share phenotypes with CCDC163P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC163P Gene

Localization for CCDC163P Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CCDC163P Gene COMPARTMENTS Subcellular localization image for CCDC163P gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
extracellular 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CCDC163P Gene

Pathways & Interactions for CCDC163P Gene

SuperPathways for CCDC163P Gene

No Data Available

Interacting Proteins for CCDC163P Gene

Gene Ontology (GO) - Biological Process for CCDC163P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC163P Gene

Drugs & Compounds for CCDC163P Gene

No Compound Related Data Available

Transcripts for CCDC163P Gene

Unigene Clusters for CCDC163P Gene

Coiled-coil domain containing 163, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC163P Gene

No ASD Table

Relevant External Links for CCDC163P Gene

GeneLoc Exon Structure for
CCDC163P
ECgene alternative splicing isoforms for
CCDC163P

Expression for CCDC163P Gene

mRNA expression in normal human tissues for CCDC163P Gene

SOURCE GeneReport for Unigene cluster for CCDC163P Gene Hs.461300

genes like me logo Genes that share expression patterns with CCDC163P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CCDC163P Gene

Orthologs for CCDC163P Gene

Evolution for CCDC163P Gene

ENSEMBL:
Gene Tree for CCDC163P (if available)
TreeFam:
Gene Tree for CCDC163P (if available)

No data available for Orthologs for CCDC163P Gene

Paralogs for CCDC163P Gene

No data available for Paralogs for CCDC163P Gene

Variants for CCDC163P Gene

Sequence variations from dbSNP and Humsavar for CCDC163P Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1130206 -- 45,494,276(+) CATGG(C/T)GAAAA nc-transcript-variant
rs1130207 -- 45,494,284(+) AAACC(C/T)GTCCC nc-transcript-variant
rs1130208 -- 45,494,290(+) GTCCC(C/T)ACAAA nc-transcript-variant
rs1130209 -- 45,494,328(+) TAGCG(C/T)GCGCC nc-transcript-variant
rs1130210 -- 45,494,330(+) GCGCG(C/T)GCCCG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CCDC163P Gene

Variant ID Type Subtype PubMed ID
nsv829726 CNV Loss 17160897
esv1477203 CNV Insertion 17803354
esv1741401 CNV Insertion 17803354
esv2747808 CNV Deletion 23290073

Variation tolerance for CCDC163P Gene

Gene Damage Index Score: 5.78; 73.57% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for CCDC163P Gene

Disorders for CCDC163P Gene

Relevant External Links for CCDC163P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CCDC163P

No disorders were found for CCDC163P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC163P Gene

Publications for CCDC163P Gene

  1. Comparative analysis of an unusual gene arrangement in the human chromosome 1. (PMID: 18672041) MakaA8owska I. (Gene 2008) 2 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CCDC163P Gene

Sources for CCDC163P Gene

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