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Aliases for CCDC148-AS1 Gene

Subcategory (RNA class) for CCDC148-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for CCDC148-AS1 Gene

  • CCDC148 Antisense RNA 1 2 3
  • CCDC148 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Tmp_locus_26 3

External Ids for CCDC148-AS1 Gene

ORGUL Members for CCDC148-AS1 Gene

Previous GeneCards Identifiers for CCDC148-AS1 Gene

  • GC02P159024

Summaries for CCDC148-AS1 Gene

GeneCards Summary for CCDC148-AS1 Gene

CCDC148-AS1 (CCDC148 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC148-AS1 Gene

Genomics for CCDC148-AS1 Gene

Genomic Location for CCDC148-AS1 Gene

Start:
158,166,650 bp from pter
End:
158,236,169 bp from pter
Size:
69,520 bases
Orientation:
Plus strand

Genomic View for CCDC148-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC148-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC148-AS1 Gene

No data available for Regulatory Elements for CCDC148-AS1 Gene

Proteins for CCDC148-AS1 Gene

Post-translational modifications for CCDC148-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC148-AS1 Gene

Domains for CCDC148-AS1 Gene

Gene Families for CCDC148-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC148-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC148-AS1 Gene

Function for CCDC148-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC148-AS1 Gene

Localization for CCDC148-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC148-AS1 Gene

Pathways for CCDC148-AS1 Gene

SuperPathways for CCDC148-AS1 Gene

No Data Available

Interacting Proteins for CCDC148-AS1 Gene

Gene Ontology (GO) - Biological Process for CCDC148-AS1 Gene

None

No data available for Pathways by source for CCDC148-AS1 Gene

Transcripts for CCDC148-AS1 Gene

mRNA/cDNA for CCDC148-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC148-AS1 Gene

CCDC148 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC148-AS1 Gene

No ASD Table

Relevant External Links for CCDC148-AS1 Gene

GeneLoc Exon Structure for
CCDC148-AS1
ECgene alternative splicing isoforms for
CCDC148-AS1

Expression for CCDC148-AS1 Gene

mRNA expression in normal human tissues for CCDC148-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CCDC148-AS1 Gene

This gene is overexpressed in Testis (49.7).

SOURCE GeneReport for Unigene cluster for CCDC148-AS1 Gene Hs.570262

genes like me logo Genes that share expressions with CCDC148-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for CCDC148-AS1 Gene

Orthologs for CCDC148-AS1 Gene

Evolution for CCDC148-AS1 Gene

ENSEMBL:
Gene Tree for CCDC148-AS1 (if available)
TreeFam:
Gene Tree for CCDC148-AS1 (if available)

No data available for Orthologs for CCDC148-AS1 Gene

Paralogs for CCDC148-AS1 Gene

No data available for Paralogs for CCDC148-AS1 Gene

Variants for CCDC148-AS1 Gene

Sequence variations from dbSNP and Humsavar for CCDC148-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1116493 -- 158,167,557(+) caaat(A/G)cattt intron-variant
rs1402863 -- 158,164,972(+) tttta(A/C)aaaat upstream-variant-2KB
rs1402864 -- 158,165,353(+) AGAAA(C/T)TGACA upstream-variant-2KB
rs1402865 -- 158,169,949(+) ATGAA(C/T)GCTTT intron-variant
rs1402866 -- 158,170,028(+) tctat(A/G)ttatc intron-variant

Relevant External Links for CCDC148-AS1 Gene

HapMap Linkage Disequilibrium report
CCDC148-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CCDC148-AS1 Gene

Disorders for CCDC148-AS1 Gene

No disorders were found for CCDC148-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for CCDC148-AS1 Gene

Publications for CCDC148-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CCDC148-AS1 Gene

Sources for CCDC148-AS1 Gene

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