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Aliases for CCDC144NL Gene

Aliases for CCDC144NL Gene

  • Coiled-Coil Domain Containing 144 Family, N-Terminal Like 2 3

External Ids for CCDC144NL Gene

Previous GeneCards Identifiers for CCDC144NL Gene

  • GC17M020711
  • GC17M020766
  • GC17M019968
  • GC17M020740

Summaries for CCDC144NL Gene

GeneCards Summary for CCDC144NL Gene

CCDC144NL (Coiled-Coil Domain Containing 144 Family, N-Terminal Like) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC144NL Gene

Genomics for CCDC144NL Gene

Genomic Location for CCDC144NL Gene

Start:
20,836,447 bp from pter
End:
20,896,140 bp from pter
Size:
59,694 bases
Orientation:
Minus strand

Genomic View for CCDC144NL Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC144NL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC144NL Gene

Proteins for CCDC144NL Gene

  • Protein details for CCDC144NL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NUI1-C144L_HUMAN
    Recommended name:
    Putative coiled-coil domain-containing protein 144 N-terminal-like
    Protein Accession:
    Q6NUI1
    Secondary Accessions:

    Protein attributes for CCDC144NL Gene

    Size:
    221 amino acids
    Molecular mass:
    23810 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC144NL Gene

Proteomics data for CCDC144NL Gene at MOPED

Post-translational modifications for CCDC144NL Gene

No Post-translational modifications

Other Protein References for CCDC144NL Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CCDC144NL Gene

Domains for CCDC144NL Gene

Protein Domains for CCDC144NL Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CCDC144NL Gene

Graphical View of Domain Structure for InterPro Entry

Q6NUI1

UniProtKB/Swiss-Prot:

C144L_HUMAN :
  • Q6NUI1
Family:
  • Belongs to the CCDC144 family.
genes like me logo Genes that share domains with CCDC144NL: view

No data available for Gene Families for CCDC144NL Gene

Function for CCDC144NL Gene

Phenotypes for CCDC144NL Gene

GenomeRNAi human phenotypes for CCDC144NL:
genes like me logo Genes that share phenotypes with CCDC144NL: view

Animal Model Products

CRISPR Products

miRNA for CCDC144NL Gene

miRTarBase miRNAs that target CCDC144NL

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CCDC144NL
    • Block miRNA regulation of CCDC144NL using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC144NL

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for CCDC144NL Gene

    Localization for CCDC144NL Gene

    Subcellular locations from

    COMPARTMENTS
    Jensen Localization Image for CCDC144NL Gene COMPARTMENTS Subcellular localization image for CCDC144NL gene
    Compartment Confidence
    nucleus 2
    plasma membrane 1

    No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CCDC144NL Gene

    Pathways for CCDC144NL Gene

    SuperPathways for CCDC144NL Gene

    No Data Available

    Interacting Proteins for CCDC144NL Gene

    Gene Ontology (GO) - Biological Process for CCDC144NL Gene

    None

    No data available for Pathways by source for CCDC144NL Gene

    Transcripts for CCDC144NL Gene

    mRNA/cDNA for CCDC144NL Gene

    (5) REFSEQ mRNAs :
    (1) Additional mRNA sequences :
    (5) Selected AceView cDNA sequences:
    (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    Unigene Clusters for CCDC144NL Gene

    Coiled-coil domain containing 144 family, N-terminal like:
    Representative Sequences:

    CRISPR Products

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate CCDC144NL
      • Block miRNA regulation of CCDC144NL using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC144NL

      Primer Products

      • OriGene qSTAR qPCR primer pairs in human,mouse,rat for CCDC144NL
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for CCDC144NL Gene

      No ASD Table

      Relevant External Links for CCDC144NL Gene

      GeneLoc Exon Structure for
      CCDC144NL
      ECgene alternative splicing isoforms for
      CCDC144NL

      Expression for CCDC144NL Gene

      mRNA expression in normal human tissues for CCDC144NL Gene

      mRNA differential expression in normal tissues according to GTEx for CCDC144NL Gene

      This gene is overexpressed in Testis (7.8) and Brain - Spinal cord (cervical c-1) (6.3).

      Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CCDC144NL Gene

      SOURCE GeneReport for Unigene cluster for CCDC144NL Gene Hs.674830

      genes like me logo Genes that share expressions with CCDC144NL: view

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CCDC144NL Gene

      Orthologs for CCDC144NL Gene

      This gene was present in the common ancestor of human and chimp.

      Orthologs for CCDC144NL Gene

      Organism Taxonomy Gene Similarity Type Details
      chimpanzee
      (Pan troglodytes)
      Mammalia CCDC144NL 35
      • 97.44 (n)
      • 95.93 (a)
      CCDC144NL 36
      • 95 (a)
      OneToOne
      Species with no ortholog for CCDC144NL:
      • A. gosspyii yeast (Ashbya gossypii)
      • Actinobacteria (Mycobacterium tuberculosis)
      • African clawed frog (Xenopus laevis)
      • African malaria mosquito (Anopheles gambiae)
      • Alicante grape (Vitis vinifera)
      • alpha proteobacteria (Wolbachia pipientis)
      • amoeba (Dictyostelium discoideum)
      • Archea (Pyrococcus horikoshii)
      • baker's yeast (Saccharomyces cerevisiae)
      • barley (Hordeum vulgare)
      • beta proteobacteria (Neisseria meningitidis)
      • bread mold (Neurospora crassa)
      • chicken (Gallus gallus)
      • Chromalveolata (Phytophthora infestans)
      • common water flea (Daphnia pulex)
      • corn (Zea mays)
      • cow (Bos Taurus)
      • dog (Canis familiaris)
      • E. coli (Escherichia coli)
      • filamentous fungi (Aspergillus nidulans)
      • Firmicute bacteria (Streptococcus pneumoniae)
      • fission yeast (Schizosaccharomyces pombe)
      • fruit fly (Drosophila melanogaster)
      • green algae (Chlamydomonas reinhardtii)
      • honey bee (Apis mellifera)
      • K. lactis yeast (Kluyveromyces lactis)
      • lizard (Anolis carolinensis)
      • loblloly pine (Pinus taeda)
      • malaria parasite (Plasmodium falciparum)
      • medicago trunc (Medicago Truncatula)
      • moss (Physcomitrella patens)
      • mouse (Mus musculus)
      • oppossum (Monodelphis domestica)
      • orangutan (Pongo pygmaeus)
      • pig (Sus scrofa)
      • platypus (Ornithorhynchus anatinus)
      • rainbow trout (Oncorhynchus mykiss)
      • rat (Rattus norvegicus)
      • rice (Oryza sativa)
      • rice blast fungus (Magnaporthe grisea)
      • schistosome parasite (Schistosoma mansoni)
      • sea anemone (Nematostella vectensis)
      • sea squirt (Ciona intestinalis)
      • sea squirt (Ciona savignyi)
      • sea urchin (Strongylocentrotus purpuratus)
      • sorghum (Sorghum bicolor)
      • soybean (Glycine max)
      • stem rust fungus (Puccinia graminis)
      • sugarcane (Saccharum officinarum)
      • thale cress (Arabidopsis thaliana)
      • tomato (Lycopersicon esculentum)
      • toxoplasmosis (Toxoplasma gondii)
      • Trichoplax (Trichoplax adhaerens)
      • tropical clawed frog (Silurana tropicalis)
      • wheat (Triticum aestivum)
      • worm (Caenorhabditis elegans)
      • zebrafish (Danio rerio)

      Evolution for CCDC144NL Gene

      ENSEMBL:
      Gene Tree for CCDC144NL (if available)
      TreeFam:
      Gene Tree for CCDC144NL (if available)

      Paralogs for CCDC144NL Gene

      Selected SIMAP similar genes for CCDC144NL Gene using alignment to 1 proteins:

      Pseudogenes.org Pseudogenes for CCDC144NL Gene

      genes like me logo Genes that share paralogs with CCDC144NL: view

      No data available for Paralogs for CCDC144NL Gene

      Variants for CCDC144NL Gene

      Sequence variations from dbSNP and Humsavar for CCDC144NL Gene

      SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
      rs4347684 -- 20,865,295(-) GATCA(C/T)TCTAG utr-variant-3-prime
      rs4605228 -- 20,865,417(-) TAAGG(C/T)AAACA stop-lost, reference
      rs4629022 -- 20,865,379(-) ACTTT(C/T)GCCTT utr-variant-3-prime
      rs6587094 -- 20,862,967(+) TCTTG(A/G)CCTAG downstream-variant-500B
      rs9891575 -- 20,863,690(+) AATTT(A/T)AAGTG utr-variant-3-prime

      Structural Variations from Database of Genomic Variants (DGV) for CCDC144NL Gene

      Variant ID Type Subtype PubMed ID
      esv2751619 CNV Gain 17911159
      esv2715745 CNV Deletion 23290073
      esv2715747 CNV Deletion 23290073
      esv24431 CNV Loss 19812545
      esv2715748 CNV Deletion 23290073
      esv2673401 CNV Deletion 23128226

      Relevant External Links for CCDC144NL Gene

      HapMap Linkage Disequilibrium report
      CCDC144NL

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC144NL Gene

      Disorders for CCDC144NL Gene

      No disorders were found for CCDC144NL Gene.

      No data available for UniProtKB/Swiss-Prot for CCDC144NL Gene

      Publications for CCDC144NL Gene

      1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
      2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
      3. Genome-wide association study identifies loci affecting blood copper, selenium and zinc. (PMID: 23720494) Evans D.M. … Whitfield J.B. (Hum. Mol. Genet. 2013) 3
      4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

      Products for CCDC144NL Gene

      • antibodies-online peptides for CCDC144NL
      • antibodies-online antibodies for CCDC144NL
      • antibodies-online kits for CCDC144NL

      Sources for CCDC144NL Gene

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