Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CCDC144CP Gene

Aliases for CCDC144CP Gene

  • Coiled-Coil Domain Containing 144C, Pseudogene 2 3 5
  • CCDC144C 3 4
  • Coiled-Coil Domain-Containing Protein 144C Pseudogene 4
  • Coiled-Coil Domain Containing 144 Pseudogene 3
  • Coiled-Coil Domain Containing 144C 2

External Ids for CCDC144CP Gene

Previous HGNC Symbols for CCDC144CP Gene

  • CCDC144C

Previous GeneCards Identifiers for CCDC144CP Gene

  • GC17P020234
  • GC17P020237

Summaries for CCDC144CP Gene

GeneCards Summary for CCDC144CP Gene

CCDC144CP (Coiled-Coil Domain Containing 144C, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC144CP Gene

Genomics for CCDC144CP Gene

Regulatory Elements for CCDC144CP Gene

Promoters for CCDC144CP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CCDC144CP on UCSC Golden Path with GeneCards custom track

Genomic Location for CCDC144CP Gene

Chromosome:
17
Start:
20,321,164 bp from pter
End:
20,403,557 bp from pter
Size:
82,394 bases
Orientation:
Plus strand

Genomic View for CCDC144CP Gene

Genes around CCDC144CP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC144CP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC144CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC144CP Gene

Proteins for CCDC144CP Gene

  • Protein details for CCDC144CP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IYA2-C144C_HUMAN
    Recommended name:
    Putative coiled-coil domain-containing protein 144C
    Protein Accession:
    Q8IYA2
    Secondary Accessions:
    • B7WNP5

    Protein attributes for CCDC144CP Gene

    Size:
    1237 amino acids
    Molecular mass:
    143112 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC144CP Gene

Proteomics data for CCDC144CP Gene at MOPED

Post-translational modifications for CCDC144CP Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for CCDC144CP Gene

Domains & Families for CCDC144CP Gene

Protein Domains for CCDC144CP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for CCDC144CP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IYA2

UniProtKB/Swiss-Prot:

C144C_HUMAN :
  • Belongs to the CCDC144 family.
Family:
  • Belongs to the CCDC144 family.
genes like me logo Genes that share domains with CCDC144CP: view

No data available for Gene Families for CCDC144CP Gene

Function for CCDC144CP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC144CP Gene

Localization for CCDC144CP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC144CP Gene

Pathways & Interactions for CCDC144CP Gene

SuperPathways for CCDC144CP Gene

No Data Available

Interacting Proteins for CCDC144CP Gene

Gene Ontology (GO) - Biological Process for CCDC144CP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC144CP Gene

Drugs & Compounds for CCDC144CP Gene

No Compound Related Data Available

Transcripts for CCDC144CP Gene

mRNA/cDNA for CCDC144CP Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC144CP Gene

Coiled-coil domain containing 144C, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC144CP Gene

No ASD Table

Relevant External Links for CCDC144CP Gene

GeneLoc Exon Structure for
CCDC144CP
ECgene alternative splicing isoforms for
CCDC144CP

Expression for CCDC144CP Gene

mRNA expression in normal human tissues for CCDC144CP Gene

mRNA differential expression in normal tissues according to GTEx for CCDC144CP Gene

This gene is overexpressed in Brain - Cerebellum (x8.7) and Testis (x7.9).

Protein differential expression in normal tissues from HIPED for CCDC144CP Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CCDC144CP Gene



SOURCE GeneReport for Unigene cluster for CCDC144CP Gene Hs.462475

genes like me logo Genes that share expression patterns with CCDC144CP: view

Protein tissue co-expression partners for CCDC144CP Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for CCDC144CP Gene

Orthologs for CCDC144CP Gene

Evolution for CCDC144CP Gene

ENSEMBL:
Gene Tree for CCDC144CP (if available)
TreeFam:
Gene Tree for CCDC144CP (if available)

No data available for Orthologs for CCDC144CP Gene

Paralogs for CCDC144CP Gene

(5) SIMAP similar genes for CCDC144CP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CCDC144CP: view

No data available for Paralogs for CCDC144CP Gene

Variants for CCDC144CP Gene

Sequence variations from dbSNP and Humsavar for CCDC144CP Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1143332 -- 20,371,880(+) acagt(A/G)atatt intron-variant
rs1811453 -- 20,328,880(-) TAAAT(G/T)AAAAA intron-variant
rs1814285 -- 20,327,812(-) gtcac(C/T)caggc intron-variant
rs1814286 -- 20,327,804(-) ggctg(C/G)agtgc intron-variant
rs1814287 -- 20,327,671(-) GTATT(C/T)TTAGT intron-variant

Relevant External Links for CCDC144CP Gene

HapMap Linkage Disequilibrium report
CCDC144CP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC144CP Gene

Disorders for CCDC144CP Gene

Relevant External Links for CCDC144CP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CCDC144CP

No disorders were found for CCDC144CP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC144CP Gene

Publications for CCDC144CP Gene

  1. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park S.S. … Lupski J.R. (Genome Res. 2002) 2 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CCDC144CP Gene

Sources for CCDC144CP Gene

Back to Top

Content