Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CCDC144CP Gene

Aliases for CCDC144CP Gene

  • Coiled-Coil Domain Containing 144C, Pseudogene 2 3
  • CCDC144C 3 4
  • Coiled-Coil Domain-Containing Protein 144C Pseudogene 4
  • Coiled-Coil Domain Containing 144 Pseudogene 3
  • Coiled-Coil Domain Containing 144C 2

External Ids for CCDC144CP Gene

Previous Symbols for CCDC144CP Gene

  • CCDC144C

Summaries for CCDC144CP Gene

GeneCards Summary for CCDC144CP Gene

CCDC144CP (Coiled-Coil Domain Containing 144C, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC144CP Gene

Genomics for CCDC144CP Gene

Genomic Location for CCDC144CP Gene

Start:
20,321,164 bp from pter
End:
20,403,557 bp from pter
Size:
82,394 bases
Orientation:
Plus strand

Genomic View for CCDC144CP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC144CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC144CP Gene

No data available for Regulatory Elements for CCDC144CP Gene

Proteins for CCDC144CP Gene

  • Protein details for CCDC144CP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IYA2-C144C_HUMAN
    Recommended name:
    Putative coiled-coil domain-containing protein 144C
    Protein Accession:
    Q8IYA2
    Secondary Accessions:
    • B7WNP5

    Protein attributes for CCDC144CP Gene

    Size:
    1237 amino acids
    Molecular mass:
    143112 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCDC144CP Gene

Proteomics data for CCDC144CP Gene at MOPED

Post-translational modifications for CCDC144CP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC144CP Gene

Domains for CCDC144CP Gene

Protein Domains for CCDC144CP Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

C144C_HUMAN
Family:
  • Belongs to the CCDC144 family.:
    • Q8IYA2
genes like me logo Genes that share domains with CCDC144CP: view

No data available for Gene Families for CCDC144CP Gene

Function for CCDC144CP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC144CP Gene

Localization for CCDC144CP Gene

No data available for Gene Ontology (GO) - Cellular Components for CCDC144CP Gene

Pathways for CCDC144CP Gene

SuperPathways for CCDC144CP Gene

No Data Available

Interacting Proteins for CCDC144CP Gene

Gene Ontology (GO) - Biological Process for CCDC144CP Gene

None

No data available for Pathways by source for CCDC144CP Gene

Transcripts for CCDC144CP Gene

mRNA/cDNA for CCDC144CP Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCDC144CP Gene

Coiled-coil domain containing 144C, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC144CP Gene

No ASD Table

Relevant External Links for CCDC144CP Gene

GeneLoc Exon Structure for
CCDC144CP
ECgene alternative splicing isoforms for
CCDC144CP

Expression for CCDC144CP Gene

mRNA expression in normal human tissues for CCDC144CP Gene

mRNA differential expression in normal tissues according to GTEx for CCDC144CP Gene

This gene is overexpressed in Brain - Cerebellum (8.7) and Testis (7.9).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CCDC144CP Gene

SOURCE GeneReport for Unigene cluster for CCDC144CP Gene Hs.462475

genes like me logo Genes that share expressions with CCDC144CP: view

Orthologs for CCDC144CP Gene

Evolution for CCDC144CP Gene

ENSEMBL:
Gene Tree for CCDC144CP (if available)
TreeFam:
Gene Tree for CCDC144CP (if available)

No data available for Orthologs for CCDC144CP Gene

Paralogs for CCDC144CP Gene

Selected SIMAP similar genes for CCDC144CP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CCDC144CP: view

No data available for Paralogs for CCDC144CP Gene

Variants for CCDC144CP Gene

Sequence variations from dbSNP and Humsavar for CCDC144CP Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs895101 -- 20,328,448(-) CCCTG(C/T)TTTAT intron-variant
rs1143332 -- 20,371,880(+) acagt(A/G)atatt intron-variant
rs1811453 -- 20,328,880(-) TAAAT(G/T)AAAAA intron-variant
rs1814285 -- 20,327,812(-) gtcac(C/T)caggc intron-variant
rs1814286 -- 20,327,804(-) ggctg(C/G)agtgc intron-variant

Relevant External Links for CCDC144CP Gene

HapMap Linkage Disequilibrium report
CCDC144CP

No data available for Structural Variations from Database of Genomic Variants (DGV) for CCDC144CP Gene

Disorders for CCDC144CP Gene

No disorders were found for CCDC144CP Gene.

No data available for UniProtKB/Swiss-Prot for CCDC144CP Gene

Publications for CCDC144CP Gene

  1. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park S.S. … Lupski J.R. (Genome Res. 2002) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for CCDC144CP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CCDC144CP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC144CP
    • Block miRNA regulation of CCDC144CP using miScript Target Protectors

    Sources for CCDC144CP Gene

    Back to Top

    Content