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Aliases for CCDC124 Gene

Aliases for CCDC124 Gene

  • Coiled-Coil Domain Containing 124 2 3 5

External Ids for CCDC124 Gene

Previous GeneCards Identifiers for CCDC124 Gene

  • GC19P017911
  • GC19P018043
  • GC19P017608
  • GC19P017977
  • GC19P018178
  • GC19P018297
  • GC19P018330
  • GC19P018704

Summaries for CCDC124 Gene

GeneCards Summary for CCDC124 Gene

CCDC124 (Coiled-Coil Domain Containing 124) is a Protein Coding gene. GO annotations related to this gene include poly(A) RNA binding.

UniProtKB/Swiss-Prot for CCDC124 Gene

  • Required for proper progression of late cytokinetic stages.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC124 Gene

Genomics for CCDC124 Gene

Regulatory Elements for CCDC124 Gene

Enhancers for CCDC124 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G017949 1.3 Ensembl ENCODE 12.6 +18.6 18645 4.0 HDGF FOXA2 ARNT ZBTB7B ZNF121 GLIS2 ZNF263 SP3 NFYC REST CCDC124 KCNN1 RNA5SP468
GH19G017942 1.2 Ensembl ENCODE 11.9 +10.4 10446 2.6 HDGF ATF1 CREB3L1 AGO1 SIN3A YY1 FOS KDM4B ZNF263 ZNF592 CCDC124 KCNN1
GH19G017946 1.6 FANTOM5 Ensembl ENCODE 8.8 +15.3 15286 2.7 HDGF PKNOX1 AGO1 SIN3A ARID4B ZNF2 ZBTB7B ZNF766 ZNF143 SP3 CCDC124 KCNN1 UNC13A
GH19G017931 1.2 ENCODE 8.5 -0.1 -60 2.9 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 MEF2D ZNF610 CCDC124 ENSG00000279617
GH19G018315 1.8 FANTOM5 ENCODE dbSUPER 1.5 +387.0 386987 9.4 MLX CREB3L1 AGO1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC LSM4 UPF1 ENSG00000268030 ENSG00000268938 PGPEP1 MVB12A SSBP4 LRRC25 IFI30 JUND
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCDC124 on UCSC Golden Path with GeneCards custom track

Promoters for CCDC124 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000107976 -115 1401 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZNF207

Genomic Location for CCDC124 Gene

Chromosome:
19
Start:
17,933,015 bp from pter
End:
17,943,991 bp from pter
Size:
10,977 bases
Orientation:
Plus strand

Genomic View for CCDC124 Gene

Genes around CCDC124 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC124 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC124 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC124 Gene

Proteins for CCDC124 Gene

  • Protein details for CCDC124 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96CT7-CC124_HUMAN
    Recommended name:
    Coiled-coil domain-containing protein 124
    Protein Accession:
    Q96CT7

    Protein attributes for CCDC124 Gene

    Size:
    223 amino acids
    Molecular mass:
    25835 Da
    Quaternary structure:
    • Interacts with RASGEF1B.

neXtProt entry for CCDC124 Gene

Post-translational modifications for CCDC124 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CCDC124 Gene

No data available for DME Specific Peptides for CCDC124 Gene

Domains & Families for CCDC124 Gene

Protein Domains for CCDC124 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for CCDC124 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96CT7

UniProtKB/Swiss-Prot:

CC124_HUMAN :
  • Belongs to the CCDC124 family.
Family:
  • Belongs to the CCDC124 family.
genes like me logo Genes that share domains with CCDC124: view

No data available for Gene Families for CCDC124 Gene

Function for CCDC124 Gene

Molecular function for CCDC124 Gene

UniProtKB/Swiss-Prot Function:
Required for proper progression of late cytokinetic stages.

Gene Ontology (GO) - Molecular Function for CCDC124 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IDA 22658674
genes like me logo Genes that share ontologies with CCDC124: view
genes like me logo Genes that share phenotypes with CCDC124: view

Animal Models for CCDC124 Gene

MGI Knock Outs for CCDC124:

Animal Model Products

CRISPR Products

miRNA for CCDC124 Gene

miRTarBase miRNAs that target CCDC124

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for CCDC124 Gene

Localization for CCDC124 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CCDC124 Gene

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Midbody. Note=Colocalizes with gamma-tubulin at interphase, prophase, metaphase, and anaphase. Relocates from centrosome to midbody at telophase.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CCDC124 gene
Compartment Confidence
cytosol 4
plasma membrane 3
cytoskeleton 3
nucleus 3

Gene Ontology (GO) - Cellular Components for CCDC124 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005815 microtubule organizing center IEA --
GO:0005856 cytoskeleton IEA --
GO:0030496 midbody IEA --
genes like me logo Genes that share ontologies with CCDC124: view

Pathways & Interactions for CCDC124 Gene

SuperPathways for CCDC124 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC124 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007049 cell cycle IEA --
GO:0051301 cell division IEA --
genes like me logo Genes that share ontologies with CCDC124: view

No data available for Pathways by source and SIGNOR curated interactions for CCDC124 Gene

Drugs & Compounds for CCDC124 Gene

No Compound Related Data Available

Transcripts for CCDC124 Gene

mRNA/cDNA for CCDC124 Gene

Unigene Clusters for CCDC124 Gene

Coiled-coil domain containing 124:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC124 Gene

No ASD Table

Relevant External Links for CCDC124 Gene

GeneLoc Exon Structure for
CCDC124
ECgene alternative splicing isoforms for
CCDC124

Expression for CCDC124 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCDC124 Gene

Protein differential expression in normal tissues from HIPED for CCDC124 Gene

This gene is overexpressed in Bone marrow stromal cell (15.3), Peripheral blood mononuclear cells (8.4), and Bone (7.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for CCDC124 Gene



Protein tissue co-expression partners for CCDC124 Gene

NURSA nuclear receptor signaling pathways regulating expression of CCDC124 Gene:

CCDC124

SOURCE GeneReport for Unigene cluster for CCDC124 Gene:

Hs.100043

mRNA Expression by UniProt/SwissProt for CCDC124 Gene:

Q96CT7-CC124_HUMAN
Tissue specificity: Ubiquitously expressed.

Evidence on tissue expression from TISSUES for CCDC124 Gene

  • Lung(4.4)
  • Muscle(2.2)
  • Nervous system(2.2)
genes like me logo Genes that share expression patterns with CCDC124: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCDC124 Gene

Orthologs for CCDC124 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for CCDC124 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CCDC124 34 35
  • 99.7 (n)
dog
(Canis familiaris)
Mammalia -- 35
  • 96 (a)
OneToMany
CCDC124 34
  • 90.28 (n)
-- 35
  • 68 (a)
OneToMany
cow
(Bos Taurus)
Mammalia CCDC124 34 35
  • 89.09 (n)
mouse
(Mus musculus)
Mammalia Ccdc124 34 16 35
  • 84.33 (n)
rat
(Rattus norvegicus)
Mammalia Ccdc124 34
  • 84.02 (n)
oppossum
(Monodelphis domestica)
Mammalia CCDC124 35
  • 83 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CCDC124 35
  • 73 (a)
OneToOne
chicken
(Gallus gallus)
Aves CCDC124 34 35
  • 76.92 (n)
tropical clawed frog
(Silurana tropicalis)
Amphibia ccdc124 34
  • 69.44 (n)
Str.3911 34
African clawed frog
(Xenopus laevis)
Amphibia Xl.3532 34
zebrafish
(Danio rerio)
Actinopterygii ccdc124 34 35
  • 68.99 (n)
-- 34
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP004110 34
  • 60.07 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG6013 34 35
  • 56.09 (n)
worm
(Caenorhabditis elegans)
Secernentea Y73E7A.1 34 35
  • 55.45 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT1G16210 34
  • 50.23 (n)
rice
(Oryza sativa)
Liliopsida Os04g0561600 34
  • 55.77 (n)
Species where no ortholog for CCDC124 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CCDC124 Gene

ENSEMBL:
Gene Tree for CCDC124 (if available)
TreeFam:
Gene Tree for CCDC124 (if available)

Paralogs for CCDC124 Gene

No data available for Paralogs for CCDC124 Gene

Variants for CCDC124 Gene

Sequence variations from dbSNP and Humsavar for CCDC124 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000150866 -- 17,933,451(+) GGGGT(C/G/T)TTAAT intron-variant, upstream-variant-2KB
rs1000286032 -- 17,939,107(+) ATGCA(A/G)TATCC intron-variant
rs1000347128 -- 17,943,969(+) GCGGC(A/G)AGGCT utr-variant-3-prime
rs1000471513 -- 17,934,603(+) CAACA(C/T)AGTCA intron-variant, upstream-variant-2KB
rs1000478939 -- 17,943,872(+) TCCCG(C/T)CAGAG utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for CCDC124 Gene

Variant ID Type Subtype PubMed ID
esv2232366 CNV deletion 18987734
esv2667655 CNV deletion 23128226
nsv470130 CNV loss 18288195
nsv833772 CNV gain+loss 17160897

Variation tolerance for CCDC124 Gene

Residual Variation Intolerance Score: 70.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.77; 47.19% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CCDC124 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC124

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC124 Gene

Disorders for CCDC124 Gene

Relevant External Links for CCDC124

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CCDC124

No disorders were found for CCDC124 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCDC124 Gene

Publications for CCDC124 Gene

  1. Coiled-coil domain containing protein 124 is a novel centrosome and midbody protein that interacts with the ras-guanine nucleotide exchange factor 1B and is involved in cytokinesis. (PMID: 23894443) Telkoparan P. … Tazebay U.H. (PLoS ONE 2013) 2 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Destabilization of Atoh1 by E3 Ubiquitin Ligase Huwe1 and Casein Kinase 1 Is Essential for Normal Sensory Hair Cell Development. (PMID: 27542412) Cheng Y.F. … Edge A.S. (J. Biol. Chem. 2016) 3 64
  4. Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation. (PMID: 25921289) Emdal K.B. … Olsen J.V. (Sci Signal 2015) 3 64
  5. RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-I_B pathway. (PMID: 26170170) Murakawa Y. … Landthaler M. (Nat Commun 2015) 3 64

Products for CCDC124 Gene

Sources for CCDC124 Gene

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