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Aliases for CCDC11P1 Gene

Subcategory (RNA class) for CCDC11P1 Gene

lncRNA

Aliases for CCDC11P1 Gene

  • Coiled-Coil Domain Containing 11 Pseudogene 1 2 3 5

External Ids for CCDC11P1 Gene

ORGUL Members for CCDC11P1 Gene

Summaries for CCDC11P1 Gene

GeneCards Summary for CCDC11P1 Gene

CCDC11P1 (Coiled-Coil Domain Containing 11 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC11P1 Gene

Genomics for CCDC11P1 Gene

Regulatory Elements for CCDC11P1 Gene

Enhancers for CCDC11P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F039580 1.2 Ensembl ENCODE 0.4 -8.6 -8629 1.0 CEBPB FOXP2 DAB2 C9 CCDC11P1 INTS6P1
GH05F039547 0.8 Ensembl ENCODE 0.3 +24.9 24872 0.8 CTCF RAD21 YY1 RFX5 ZNF766 SMC3 PRDM10 MAFK ZNF654 CEBPB DAB2 C9 FYB CCDC11P1 LINC02104
GH05F039538 0.6 ENCODE 0.3 +33.1 33109 1.2 DAB2 C9 LINC02104 CCDC11P1
GH05F039606 0.7 ENCODE 0.3 -33.7 -33702 0.2 JUN CEBPB DPF2 EP300 OSR2 JUND MAFF GATA3 FOSL2 FOS CCDC11P1 INTS6P1
GH05F039543 1.3 FANTOM5 Ensembl ENCODE 0.3 +29.1 29072 1.2 HDAC1 TAL1 JUN DDX20 ZNF316 GATA2 NCOR1 NFE2 MAFK NFE2L2 DAB2 C9 FYB LINC02104 CCDC11P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CCDC11P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCDC11P1 Gene

Chromosome:
5
Start:
39,571,478 bp from pter
End:
39,572,672 bp from pter
Size:
1,195 bases
Orientation:
Minus strand

Genomic View for CCDC11P1 Gene

Genes around CCDC11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCDC11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCDC11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC11P1 Gene

Proteins for CCDC11P1 Gene

Post-translational modifications for CCDC11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCDC11P1 Gene

Domains & Families for CCDC11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCDC11P1 Gene

Function for CCDC11P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCDC11P1 Gene

Localization for CCDC11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCDC11P1 Gene

Pathways & Interactions for CCDC11P1 Gene

SuperPathways for CCDC11P1 Gene

No Data Available

Interacting Proteins for CCDC11P1 Gene

Gene Ontology (GO) - Biological Process for CCDC11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCDC11P1 Gene

Transcripts for CCDC11P1 Gene

mRNA/cDNA for CCDC11P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC11P1 Gene

No ASD Table

Relevant External Links for CCDC11P1 Gene

GeneLoc Exon Structure for
CCDC11P1
ECgene alternative splicing isoforms for
CCDC11P1

Expression for CCDC11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CCDC11P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CCDC11P1 Gene:

CCDC11P1
genes like me logo Genes that share expression patterns with CCDC11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CCDC11P1 Gene

Orthologs for CCDC11P1 Gene

Evolution for CCDC11P1 Gene

ENSEMBL:
Gene Tree for CCDC11P1 (if available)
TreeFam:
Gene Tree for CCDC11P1 (if available)

No data available for Orthologs for CCDC11P1 Gene

Paralogs for CCDC11P1 Gene

No data available for Paralogs for CCDC11P1 Gene

Variants for CCDC11P1 Gene

Relevant External Links for CCDC11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCDC11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCDC11P1 Gene

Disorders for CCDC11P1 Gene

No disorders were found for CCDC11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCDC11P1 Gene

Publications for CCDC11P1 Gene

No publications were found for CCDC11P1 Gene.

Products for CCDC11P1 Gene

Sources for CCDC11P1 Gene

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