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Aliases for CCDC117 Gene

Aliases for CCDC117 Gene

  • Coiled-Coil Domain Containing 117 2 3
  • Coiled-Coil Domain-Containing Protein 117 3
  • DJ366L4.1 3

External Ids for CCDC117 Gene

Previous GeneCards Identifiers for CCDC117 Gene

  • GC22P027498
  • GC22P029168
  • GC22P012133

Summaries for CCDC117 Gene

GeneCards Summary for CCDC117 Gene

CCDC117 (Coiled-Coil Domain Containing 117) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC117 Gene

Genomics for CCDC117 Gene

Regulatory Elements for CCDC117 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CCDC117 Gene

28,772,674 bp from pter
28,789,301 bp from pter
16,628 bases
Plus strand

Genomic View for CCDC117 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC117 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC117 Gene

Proteins for CCDC117 Gene

  • Protein details for CCDC117 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Coiled-coil domain-containing protein 117
    Protein Accession:
    Secondary Accessions:
    • A8K0F1
    • B7Z2V1
    • B7Z860
    • Q6ICA7
    • Q8N278

    Protein attributes for CCDC117 Gene

    279 amino acids
    Molecular mass:
    30541 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for CCDC117 Gene


neXtProt entry for CCDC117 Gene

Proteomics data for CCDC117 Gene at MOPED

Post-translational modifications for CCDC117 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for CCDC117 Gene

Domains for CCDC117 Gene

Protein Domains for CCDC117 Gene


Suggested Antigen Peptide Sequences for CCDC117 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC117: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC117 Gene

Function for CCDC117 Gene

Gene Ontology (GO) - Molecular Function for CCDC117 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 19875381
genes like me logo Genes that share ontologies with CCDC117: view

Phenotypes for CCDC117 Gene

GenomeRNAi human phenotypes for CCDC117:
genes like me logo Genes that share phenotypes with CCDC117: view

Animal Model Products

CRISPR Products

miRNA for CCDC117 Gene

miRTarBase miRNAs that target CCDC117

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC117

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for CCDC117 Gene

Localization for CCDC117 Gene

Subcellular locations from

Jensen Localization Image for CCDC117 Gene COMPARTMENTS Subcellular localization image for CCDC117 gene
Compartment Confidence
nucleus 3
cytosol 2
cytoskeleton 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CCDC117 Gene

Pathways for CCDC117 Gene

SuperPathways for CCDC117 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCDC117 Gene


No data available for Pathways by source for CCDC117 Gene

Transcripts for CCDC117 Gene

Unigene Clusters for CCDC117 Gene

Coiled-coil domain containing 117:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC117

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC117 Gene

No ASD Table

Relevant External Links for CCDC117 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CCDC117 Gene

mRNA expression in normal human tissues for CCDC117 Gene

Protein differential expression in normal tissues for CCDC117 Gene

This gene is overexpressed in Adrenal (26.0), Peripheral blood mononuclear cells (24.6), and Fetal ovary (8.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for CCDC117 Gene

SOURCE GeneReport for Unigene cluster for CCDC117 Gene Hs.406460

genes like me logo Genes that share expressions with CCDC117: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for CCDC117 Gene

Orthologs for CCDC117 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CCDC117 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia CCDC117 35
  • 90.89 (n)
  • 88.85 (a)
CCDC117 36
  • 88 (a)
(Canis familiaris)
Mammalia CCDC117 35
  • 90.97 (n)
  • 90.25 (a)
CCDC117 36
  • 89 (a)
(Mus musculus)
Mammalia Ccdc117 35
  • 82.31 (n)
  • 79.06 (a)
Ccdc117 16
Ccdc117 36
  • 79 (a)
(Pan troglodytes)
Mammalia CCDC117 35
  • 98.81 (n)
  • 97.13 (a)
CCDC117 36
  • 97 (a)
(Rattus norvegicus)
Mammalia Ccdc117 35
  • 83.75 (n)
  • 79.78 (a)
(Monodelphis domestica)
Mammalia CCDC117 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia CCDC117 36
  • 57 (a)
(Gallus gallus)
Aves CCDC117 35
  • 68.15 (n)
  • 60.71 (a)
CCDC117 36
  • 49 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia ccdc117 35
  • 52.45 (n)
  • 39.09 (a)
(Danio rerio)
Actinopterygii CCDC117 36
  • 24 (a)
Species with no ortholog for CCDC117:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CCDC117 Gene

Gene Tree for CCDC117 (if available)
Gene Tree for CCDC117 (if available)

Paralogs for CCDC117 Gene Pseudogenes for CCDC117 Gene

genes like me logo Genes that share paralogs with CCDC117: view

No data available for Paralogs for CCDC117 Gene

Variants for CCDC117 Gene

Sequence variations from dbSNP and Humsavar for CCDC117 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs1222 -- 28,789,125(-) CGTGC(G/T)GATAA utr-variant-3-prime
rs137939 -- 28,776,372(+) ctagg(C/T)gacag intron-variant
rs2206061 -- 28,779,885(+) GGTCT(A/G)CGTAC intron-variant
rs2235430 -- 28,773,131(+) tccgc(C/G)ccggg intron-variant, upstream-variant-2KB
rs2235431 -- 28,773,302(+) ACTTT(A/C)CCAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CCDC117 Gene

Variant ID Type Subtype PubMed ID
nsv9895 CNV Gain+Loss 18304495
nsv834169 CNV Loss 17160897
esv2430624 CNV Deletion 19546169
esv2307652 CNV Deletion 18987734
esv4499 CNV Deletion 18987735
esv7361 CNV Loss 19470904
esv2724119 CNV Deletion 23290073
esv1361730 CNV Deletion 17803354
esv2496014 CNV Deletion 19546169

Relevant External Links for CCDC117 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC117 Gene

Disorders for CCDC117 Gene

No disorders were found for CCDC117 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CCDC117 Gene

Publications for CCDC117 Gene

  1. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. A genome annotation-driven approach to cloning the human ORFeome. (PMID: 15461802) Collins J.E. … Dunham I. (Genome Biol. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for CCDC117 Gene

Sources for CCDC117 Gene

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