Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CCDC107 Gene

Aliases for CCDC107 Gene

  • Coiled-Coil Domain Containing 107 2 3
  • Coiled-Coil Domain-Containing Protein 107 3
  • PSEC0222 3

External Ids for CCDC107 Gene

Previous GeneCards Identifiers for CCDC107 Gene

  • GC09P035649
  • GC09P035613

Summaries for CCDC107 Gene

Entrez Gene Summary for CCDC107 Gene

  • This gene encodes a membrane protein which contains a coiled-coil domain in the central region. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2013]

GeneCards Summary for CCDC107 Gene

CCDC107 (Coiled-Coil Domain Containing 107) is a Protein Coding gene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCDC107 Gene

Genomics for CCDC107 Gene

Regulatory Elements for CCDC107 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CCDC107 Gene

35,658,290 bp from pter
35,661,511 bp from pter
3,222 bases
Plus strand

Genomic View for CCDC107 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCDC107 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCDC107 Gene

Proteins for CCDC107 Gene

  • Protein details for CCDC107 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Coiled-coil domain-containing protein 107
    Protein Accession:
    Secondary Accessions:
    • A6XND6
    • Q5T4R5
    • Q5T4R8
    • Q5T4R9
    • Q86VB6
    • Q8N2E4

    Protein attributes for CCDC107 Gene

    283 amino acids
    Molecular mass:
    30509 Da
    Quaternary structure:
    No Data Available
    • Sequence=CAI13448.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for CCDC107 Gene


neXtProt entry for CCDC107 Gene

Proteomics data for CCDC107 Gene at MOPED

Post-translational modifications for CCDC107 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for CCDC107 Gene

Domains for CCDC107 Gene

Protein Domains for CCDC107 Gene


Suggested Antigen Peptide Sequences for CCDC107 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCDC107: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CCDC107 Gene

Function for CCDC107 Gene

Phenotypes for CCDC107 Gene

GenomeRNAi human phenotypes for CCDC107:
genes like me logo Genes that share phenotypes with CCDC107: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC107

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CCDC107 Gene

Localization for CCDC107 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CCDC107 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

Jensen Localization Image for CCDC107 Gene COMPARTMENTS Subcellular localization image for CCDC107 gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
extracellular 1
nucleus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for CCDC107 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with CCDC107: view

Pathways for CCDC107 Gene

SuperPathways for CCDC107 Gene

No Data Available

Interacting Proteins for CCDC107 Gene

Gene Ontology (GO) - Biological Process for CCDC107 Gene


No data available for Pathways by source for CCDC107 Gene

Transcripts for CCDC107 Gene

Unigene Clusters for CCDC107 Gene

Coiled-coil domain containing 107:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCDC107

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCDC107 Gene

No ASD Table

Relevant External Links for CCDC107 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CCDC107 Gene

mRNA expression in normal human tissues for CCDC107 Gene

Protein differential expression in normal tissues for CCDC107 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for CCDC107 Gene

SOURCE GeneReport for Unigene cluster for CCDC107 Gene Hs.745107

genes like me logo Genes that share expressions with CCDC107: view

Expression partners for CCDC107 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for CCDC107 Gene

Orthologs for CCDC107 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CCDC107 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia CCDC107 35
  • 81.7 (n)
  • 70.2 (a)
CCDC107 36
  • 69 (a)
(Canis familiaris)
Mammalia CCDC107 35
  • 85.19 (n)
  • 76.39 (a)
CCDC107 36
  • 61 (a)
(Mus musculus)
Mammalia Ccdc107 35
  • 76.68 (n)
  • 66.67 (a)
Ccdc107 16
Ccdc107 36
  • 64 (a)
(Pan troglodytes)
Mammalia CCDC107 35
  • 98.7 (n)
  • 97.66 (a)
CCDC107 36
  • 98 (a)
(Rattus norvegicus)
Mammalia Ccdc107 35
  • 76.98 (n)
  • 69.92 (a)
Species with no ortholog for CCDC107:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CCDC107 Gene

Gene Tree for CCDC107 (if available)
Gene Tree for CCDC107 (if available)

Paralogs for CCDC107 Gene Pseudogenes for CCDC107 Gene

genes like me logo Genes that share paralogs with CCDC107: view

No data available for Paralogs for CCDC107 Gene

Variants for CCDC107 Gene

Sequence variations from dbSNP and Humsavar for CCDC107 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs1538537 -- 35,657,172(-) CAAGT(A/T)AGAAC upstream-variant-2KB
rs1934159 -- 35,656,830(-) TTTCA(C/T)TTTCT upstream-variant-2KB
rs1934160 -- 35,656,677(-) TCTCA(C/T)GAGGA upstream-variant-2KB
rs10972552 -- 35,656,878(+) GGTTC(C/T)GAATG upstream-variant-2KB
rs34080245 -- 35,657,066(+) CTACC(C/T)GGGAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CCDC107 Gene

Variant ID Type Subtype PubMed ID
dgv8168n71 CNV Gain 21882294

Relevant External Links for CCDC107 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCDC107 Gene

Disorders for CCDC107 Gene

No disorders were found for CCDC107 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CCDC107 Gene

Publications for CCDC107 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PMID: 16713569) Lim J. … Zoghbi H.Y. (Cell 2006) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for CCDC107 Gene

Sources for CCDC107 Gene

Back to Top