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Aliases for CCAT2 Gene

Subcategory (RNA class) for CCAT2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CCAT2 Gene

  • Colon Cancer Associated Transcript 2 (Non-Protein Coding) 2 3
  • Non-Coding RNA Involved In Cancer Predisposition 1 2 3
  • Long Intergenic Non-Protein Coding RNA 873 2 3
  • LINC00873 3
  • NCCP1 3

External Ids for CCAT2 Gene

Previous GeneCards Identifiers for CCAT2 Gene

  • GC08U901766

Summaries for CCAT2 Gene

GeneCards Summary for CCAT2 Gene

CCAT2 (Colon Cancer Associated Transcript 2 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCAT2 Gene

Genomics for CCAT2 Gene

Genomic Location for CCAT2 Gene

127,400,399 bp from pter
127,402,150 bp from pter
1,752 bases
Plus strand

Genomic View for CCAT2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCAT2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCAT2 Gene

No data available for Regulatory Elements for CCAT2 Gene

Proteins for CCAT2 Gene

Post-translational modifications for CCAT2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCAT2 Gene

Domains for CCAT2 Gene

Gene Families for CCAT2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CCAT2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCAT2 Gene

Function for CCAT2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCAT2 Gene

Localization for CCAT2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCAT2 Gene

Pathways for CCAT2 Gene

SuperPathways for CCAT2 Gene

No Data Available

Interacting Proteins for CCAT2 Gene

Gene Ontology (GO) - Biological Process for CCAT2 Gene


No data available for Pathways by source for CCAT2 Gene

Transcripts for CCAT2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CCAT2 Gene

No ASD Table

Relevant External Links for CCAT2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for CCAT2 Gene

Expression for CCAT2 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CCAT2 Gene

Orthologs for CCAT2 Gene

No data available for Orthologs and Evolution for CCAT2 Gene

Paralogs for CCAT2 Gene

No data available for Paralogs for CCAT2 Gene

Variants for CCAT2 Gene

Relevant External Links for CCAT2 Gene

HapMap Linkage Disequilibrium report
Human Gene Mutation Database (HGMD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for CCAT2 Gene

Disorders for CCAT2 Gene

No disorders were found for CCAT2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CCAT2 Gene

Publications for CCAT2 Gene

  1. CCAT2 is a lung adenocarcinoma-specific long non-coding RNA and promotes invasion of non-small cell lung cancer. (PMID: 24504682) Qiu M. … Yin R. (Tumour Biol. 2014) 2 3
  2. CCAT2, a novel noncoding RNA mapping to 8q24, underlies metastatic progression and chromosomal instability in colon cancer. (PMID: 23796952) Ling H. … Calin G.A. (Genome Res. 2013) 2 3
  3. Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis. (PMID: 23266556) Peters U. … Hsu L. (Gastroenterology 2013) 3
  4. A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3. (PMID: 18372905) Tomlinson I.P. … Houlston R.S. (Nat. Genet. 2008) 3
  5. Multiple loci identified in a genome-wide association study of prostate cancer. (PMID: 18264096) Thomas G. … Chanock S.J. (Nat. Genet. 2008) 3

Products for CCAT2 Gene

Sources for CCAT2 Gene

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