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Aliases for CBX3P4 Gene

Aliases for CBX3P4 Gene

  • Chromobox 3 Pseudogene 4 2 3 5
  • Chromobox Homolog 3 Pseudogene 4 2

External Ids for CBX3P4 Gene

Previous GeneCards Identifiers for CBX3P4 Gene

  • GC12M002898

Summaries for CBX3P4 Gene

GeneCards Summary for CBX3P4 Gene

CBX3P4 (Chromobox 3 Pseudogene 4) is a Pseudogene.

Additional gene information for CBX3P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBX3P4 Gene

Genomics for CBX3P4 Gene

Regulatory Elements for CBX3P4 Gene

Enhancers for CBX3P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H002256 1.2 ENCODE dbSUPER 64 +537.6 537597 1 ZNF133 GLI4 TCF12 ZNF121 ZNF302 ZNF416 ZNF202 YY2 ZNF488 ZFP41 ITFG2 TULP3 DCP1B CBX3P4 IQSEC3P1 RPS27P3 CACNA1C-IT3 CACNA1C-AS3 ITFG2-AS1 CACNA1C-AS4
GH12H001924 1.3 ENCODE dbSUPER 26.6 +869.5 869485 0 ZNF133 FEZF1 GLI4 ZNF121 ZNF302 ZNF416 ZNF548 YY2 TSHZ1 ZNF488 ITFG2 TULP3 RAD52 DCP1B CBX3P4 ENSG00000250132 CACNA1C-AS3 CACNA1C-IT3 ITFG2-AS1 LRTM2
GH12H001992 1.8 FANTOM5 Ensembl ENCODE dbSUPER 17.8 +799.9 799924 3 FOXA2 ARID4B YY1 FOS RUNX3 JUNB REST KAT8 NFIL3 ETV4 TULP3 ITFG2 CBX3P4 DCP1B ITFG2-AS1 LINC00942 IQSEC3P1 FBXL14 GC12M001963
GH12H002876 1.1 ENCODE 28.2 -83.4 -83378 3 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF302 ZNF143 ZNF207 ITFG2 TULP3 DCP1B CBX3P4 RHNO1 ITFG2-AS1 NRIP2 RPS27P3 IQSEC3P1 FKBP4
GH12H003083 1.1 Ensembl ENCODE dbSUPER 12.5 -289.5 -289458 0 ZIC2 RARA GABPA ZNF23 SMAD4 MLLT1 BCL6 HNF4A SETDB1 TSPAN9 CBX3P4 FOXM1 RHNO1 TULP3 PIR34599 GC12P003091
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CBX3P4 on UCSC Golden Path with GeneCards custom track

Promoters for CBX3P4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000047878 -1105 2401 HDGF ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF207 ZNF143 SP3

Genomic Location for CBX3P4 Gene

Chromosome:
12
Start:
2,786,931 bp from pter
End:
2,794,295 bp from pter
Size:
7,365 bases
Orientation:
Minus strand

Genomic View for CBX3P4 Gene

Genes around CBX3P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CBX3P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CBX3P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBX3P4 Gene

Proteins for CBX3P4 Gene

Post-translational modifications for CBX3P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CBX3P4 Gene

Domains & Families for CBX3P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CBX3P4 Gene

Function for CBX3P4 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CBX3P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CBX3P4 Gene

Localization for CBX3P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CBX3P4 Gene

Pathways & Interactions for CBX3P4 Gene

SuperPathways for CBX3P4 Gene

No Data Available

Interacting Proteins for CBX3P4 Gene

Gene Ontology (GO) - Biological Process for CBX3P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CBX3P4 Gene

Drugs & Compounds for CBX3P4 Gene

No Compound Related Data Available

Transcripts for CBX3P4 Gene

mRNA/cDNA for CBX3P4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CBX3P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CBX3P4 Gene

No ASD Table

Relevant External Links for CBX3P4 Gene

GeneLoc Exon Structure for
CBX3P4
ECgene alternative splicing isoforms for
CBX3P4

Expression for CBX3P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CBX3P4 Gene

mRNA differential expression in normal tissues according to GTEx for CBX3P4 Gene

This gene is overexpressed in Testis (x8.0).

NURSA nuclear receptor signaling pathways regulating expression of CBX3P4 Gene:

CBX3P4
genes like me logo Genes that share expression patterns with CBX3P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CBX3P4 Gene

Orthologs for CBX3P4 Gene

Evolution for CBX3P4 Gene

ENSEMBL:
Gene Tree for CBX3P4 (if available)
TreeFam:
Gene Tree for CBX3P4 (if available)

No data available for Orthologs for CBX3P4 Gene

Paralogs for CBX3P4 Gene

No data available for Paralogs for CBX3P4 Gene

Variants for CBX3P4 Gene

Relevant External Links for CBX3P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CBX3P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CBX3P4 Gene

Disorders for CBX3P4 Gene

No disorders were found for CBX3P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CBX3P4 Gene

Publications for CBX3P4 Gene

No publications were found for CBX3P4 Gene.

Products for CBX3P4 Gene

Sources for CBX3P4 Gene

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