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Aliases for CBX3P2 Gene

Aliases for CBX3P2 Gene

  • Chromobox 3 Pseudogene 2 2 3 5
  • Chromobox Homolog 3 Pseudogene 2 2

External Ids for CBX3P2 Gene

Summaries for CBX3P2 Gene

GeneCards Summary for CBX3P2 Gene

CBX3P2 (Chromobox 3 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBX3P2 Gene

Genomics for CBX3P2 Gene

Regulatory Elements for CBX3P2 Gene

Enhancers for CBX3P2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CBX3P2 on UCSC Golden Path with GeneCards custom track

Promoters for CBX3P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around CBX3P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CBX3P2 Gene

Chromosome:
18
Start:
2,652,170 bp from pter
End:
2,655,395 bp from pter
Size:
3,226 bases
Orientation:
Minus strand

Genomic View for CBX3P2 Gene

Genes around CBX3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CBX3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CBX3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBX3P2 Gene

Proteins for CBX3P2 Gene

Post-translational modifications for CBX3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CBX3P2 Gene

Domains & Families for CBX3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CBX3P2 Gene

Function for CBX3P2 Gene

Phenotypes for CBX3P2 Gene

GenomeRNAi human phenotypes for CBX3P2:
genes like me logo Genes that share phenotypes with CBX3P2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CBX3P2 Gene

Localization for CBX3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CBX3P2 Gene

Pathways & Interactions for CBX3P2 Gene

SuperPathways for CBX3P2 Gene

No Data Available

Interacting Proteins for CBX3P2 Gene

Gene Ontology (GO) - Biological Process for CBX3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CBX3P2 Gene

Drugs & Compounds for CBX3P2 Gene

No Compound Related Data Available

Transcripts for CBX3P2 Gene

mRNA/cDNA for CBX3P2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CBX3P2 Gene

No ASD Table

Relevant External Links for CBX3P2 Gene

GeneLoc Exon Structure for
CBX3P2
ECgene alternative splicing isoforms for
CBX3P2

Expression for CBX3P2 Gene

mRNA expression in normal human tissues for CBX3P2 Gene

SOURCE GeneReport for Unigene cluster for CBX3P2 Gene Hs.712861

genes like me logo Genes that share expression patterns with CBX3P2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CBX3P2 Gene

Orthologs for CBX3P2 Gene

Evolution for CBX3P2 Gene

ENSEMBL:
Gene Tree for CBX3P2 (if available)
TreeFam:
Gene Tree for CBX3P2 (if available)

No data available for Orthologs for CBX3P2 Gene

Paralogs for CBX3P2 Gene

No data available for Paralogs for CBX3P2 Gene

Variants for CBX3P2 Gene

Sequence variations from dbSNP and Humsavar for CBX3P2 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs492170 -- 2,652,365(-) AGTAG(A/G)AAAAG nc-transcript-variant
rs591272 -- 2,652,310(-) ATGGT(A/C)TATTA nc-transcript-variant
rs8095311 -- 2,652,669(+) AAGAC(A/C)TAGGT nc-transcript-variant
rs9675718 -- 2,652,486(+) AAATA(A/G)ATTTC nc-transcript-variant
rs9675732 -- 2,652,831(+) TGCCA(A/G)CACCA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CBX3P2 Gene

Variant ID Type Subtype PubMed ID
nsv909315 CNV Loss 21882294

Relevant External Links for CBX3P2 Gene

HapMap Linkage Disequilibrium report
CBX3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CBX3P2 Gene

Disorders for CBX3P2 Gene

Relevant External Links for CBX3P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CBX3P2

No disorders were found for CBX3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CBX3P2 Gene

Publications for CBX3P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67

Products for CBX3P2 Gene

Sources for CBX3P2 Gene

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