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Aliases for CBX3P1 Gene

Aliases for CBX3P1 Gene

  • Chromobox 3 Pseudogene 1 2 3 5
  • Chromobox Homolog 3 Pseudogene 1 2

External Ids for CBX3P1 Gene

Previous GeneCards Identifiers for CBX3P1 Gene

  • GC11P027526

Summaries for CBX3P1 Gene

GeneCards Summary for CBX3P1 Gene

CBX3P1 (Chromobox 3 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBX3P1 Gene

Genomics for CBX3P1 Gene

Regulatory Elements for CBX3P1 Gene

Enhancers for CBX3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F028105 1 FANTOM5 ENCODE 16.2 +302.3 302292 6.2 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 LINC00678 ENSG00000255094 CBX3P1 RPS25P1 ENSG00000249867 METTL15 BDNF KIF18A GC11M028129
GH11F027807 0.2 ENCODE 0.8 +1.5 1512 0.1 CEBPB EP300 BRCA1 STAT3 RCOR1 MAFK PRDM1 CHD2 TCF7L2 CBX3P1 GC11P027827
GH11F027796 0.9 Ensembl ENCODE 0.4 -9.8 -9844 0.9 INSM2 KLF17 FEZF1 ZNF121 SCRT2 KLF7 ZNF488 TSHZ1 ZNF843 SMARCA4 CBX3P1 GC11M027760
GH11F027770 0.6 ENCODE 0.3 -35.5 -35529 0.2 JUND CEBPB MAX EP300 TCF7L2 GC11M027760 CBX3P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CBX3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CBX3P1 Gene

Chromosome:
11
Start:
27,806,317 bp from pter
End:
27,808,558 bp from pter
Size:
2,242 bases
Orientation:
Plus strand

Genomic View for CBX3P1 Gene

Genes around CBX3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CBX3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CBX3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBX3P1 Gene

Proteins for CBX3P1 Gene

Post-translational modifications for CBX3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CBX3P1 Gene

Domains & Families for CBX3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CBX3P1 Gene

Function for CBX3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CBX3P1 Gene

Localization for CBX3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CBX3P1 Gene

Pathways & Interactions for CBX3P1 Gene

SuperPathways for CBX3P1 Gene

No Data Available

Interacting Proteins for CBX3P1 Gene

Gene Ontology (GO) - Biological Process for CBX3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CBX3P1 Gene

Transcripts for CBX3P1 Gene

mRNA/cDNA for CBX3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CBX3P1 Gene

No ASD Table

Relevant External Links for CBX3P1 Gene

GeneLoc Exon Structure for
CBX3P1
ECgene alternative splicing isoforms for
CBX3P1

Expression for CBX3P1 Gene

mRNA expression in normal human tissues for CBX3P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CBX3P1 Gene:

CBX3P1
genes like me logo Genes that share expression patterns with CBX3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CBX3P1 Gene

Orthologs for CBX3P1 Gene

Evolution for CBX3P1 Gene

ENSEMBL:
Gene Tree for CBX3P1 (if available)
TreeFam:
Gene Tree for CBX3P1 (if available)

No data available for Orthologs for CBX3P1 Gene

Paralogs for CBX3P1 Gene

No data available for Paralogs for CBX3P1 Gene

Variants for CBX3P1 Gene

Relevant External Links for CBX3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CBX3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CBX3P1 Gene

Disorders for CBX3P1 Gene

Relevant External Links for CBX3P1

Genetic Association Database (GAD)
CBX3P1

No disorders were found for CBX3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CBX3P1 Gene

Publications for CBX3P1 Gene

  1. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D. … Mitchell G.F. (BMC Med. Genet. 2007) 46 64
  2. A human HP1 pseudogene maps to chromosome 11p14. (PMID: 10763413) Park A. … Worman H.J. (Somat. Cell Mol. Genet. 1998) 3 64

Products for CBX3P1 Gene

Sources for CBX3P1 Gene

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