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Aliases for CBWD7 Gene

Aliases for CBWD7 Gene

  • COBW Domain Containing 7 2 3
  • Putative Cobalamin Synthase W Domain-Containing Protein 7 4

External Ids for CBWD7 Gene

Previous GeneCards Identifiers for CBWD7 Gene

  • GC09U900750
  • GC09P042661
  • GC09P042662
  • GC09P042667
  • GC09P042658
  • GC09P042671
  • GC09P042836
  • GC09P042945

Summaries for CBWD7 Gene

GeneCards Summary for CBWD7 Gene

CBWD7 (COBW Domain Containing 7) is a Protein Coding gene. An important paralog of this gene is CBWD3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CBWD7 Gene

Genomics for CBWD7 Gene

Regulatory Elements for CBWD7 Gene

Genomic Location for CBWD7 Gene

Start:
41,131,306 bp from pter
End:
41,199,261 bp from pter
Size:
67,956 bases
Orientation:
Minus strand

Genomic View for CBWD7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CBWD7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CBWD7 Gene

Proteins for CBWD7 Gene

  • Protein details for CBWD7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NM15-CBWD7_HUMAN
    Recommended name:
    Putative COBW domain-containing protein 7
    Protein Accession:
    A6NM15
    Secondary Accessions:

    Protein attributes for CBWD7 Gene

    Size:
    247 amino acids
    Molecular mass:
    28232 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CBWD7 Gene

Proteomics data for CBWD7 Gene at MOPED

Post-translational modifications for CBWD7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for CBWD7 Gene

Domains for CBWD7 Gene

Protein Domains for CBWD7 Gene

Suggested Antigen Peptide Sequences for CBWD7 Gene

Graphical View of Domain Structure for InterPro Entry

A6NM15

UniProtKB/Swiss-Prot:

CBWD7_HUMAN :
  • A6NM15
Domain:
  • Contains 1 cobW C-terminal domain.
Family:
  • Belongs to the CobW family.
genes like me logo Genes that share domains with CBWD7: view

No data available for Gene Families for CBWD7 Gene

Function for CBWD7 Gene

Gene Ontology (GO) - Molecular Function for CBWD7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005524 ATP binding IEA --
genes like me logo Genes that share ontologies with CBWD7: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CBWD7 Gene

Localization for CBWD7 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CBWD7 Gene COMPARTMENTS Subcellular localization image for CBWD7 gene
Compartment Confidence
cytosol 2
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CBWD7 Gene

Pathways for CBWD7 Gene

SuperPathways for CBWD7 Gene

No Data Available

Interacting Proteins for CBWD7 Gene

Gene Ontology (GO) - Biological Process for CBWD7 Gene

None

No data available for Pathways by source for CBWD7 Gene

Transcripts for CBWD7 Gene

mRNA/cDNA for CBWD7 Gene

(2) REFSEQ mRNAs :
(18) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CBWD7

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CBWD7 Gene

No ASD Table

Relevant External Links for CBWD7 Gene

GeneLoc Exon Structure for
CBWD7
ECgene alternative splicing isoforms for
CBWD7

Expression for CBWD7 Gene

mRNA expression in normal human tissues for CBWD7 Gene

genes like me logo Genes that share expressions with CBWD7: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for CBWD7 Gene

Orthologs for CBWD7 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CBWD7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CBWD2 36
  • 63 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 36
  • 56 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 56 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Cbwd1 36
  • 51 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 49 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 47 (a)
OneToMany
chicken
(Gallus gallus)
Aves CBWD1 36
  • 44 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 43 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii cbwd 36
  • 42 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 36
  • 18 (a)
OneToMany
Species with no ortholog for CBWD7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CBWD7 Gene

ENSEMBL:
Gene Tree for CBWD7 (if available)
TreeFam:
Gene Tree for CBWD7 (if available)

Paralogs for CBWD7 Gene

Paralogs for CBWD7 Gene

Selected SIMAP similar genes for CBWD7 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for CBWD7 Gene

genes like me logo Genes that share paralogs with CBWD7: view

Variants for CBWD7 Gene

Relevant External Links for CBWD7 Gene

HapMap Linkage Disequilibrium report
CBWD7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for CBWD7 Gene

Disorders for CBWD7 Gene

No disorders were found for CBWD7 Gene.

No data available for UniProtKB/Swiss-Prot for CBWD7 Gene

Publications for CBWD7 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  5. Global identification of modular cullin-RING ligase substrates. (PMID: 21963094) Emanuele M.J. … Elledge S.J. (Cell 2011) 3

Products for CBWD7 Gene

Sources for CBWD7 Gene

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