Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CATSPER1 Gene

protein-coding   GIFtS: 52
GCID: GC11M065784

cation channel, sperm associated 1

 Explore 4 diseases affiliated with
CATSPER1 via our new
 Human Malady Compendium 
Biological research products
for CATSPER1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cation Channel, Sperm Associated 11 2     Cation Channel Sperm-Associated Protein 12
CATSPER1 2 5     Sperm Ion Channel2
HCatSper1     Sperm-Associated Cation Channel 12
SPGF72     CatSper13

External Ids:    HGNC: 171161   Entrez Gene: 1171442   Ensembl: ENSG000001752947   OMIM: 6063895   UniProtKB: Q8NEC53   

Export aliases for CATSPER1 gene to outside databases

Previous GC identifers: GC11M068318 GC11M067465 GC11M066034 GC11M065559 GC11M065540 GC11M062110


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CATSPER1:
Calcium ions play a primary role in the regulation of sperm motility. This gene belongs to a family of putative cation
channels that are specific to spermatozoa and localize to the flagellum. The protein family features a single repeat
with six membrane-spanning segments and a predicted calcium-selective pore region. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5
Function: Voltage-gated calcium channel that plays a central role in calcium-dependent physiological responses
essential for successful fertilization, such as sperm hyperactivation, acrosome reaction and chemotaxis towards the
oocyte. Activated by extracellular progesterone and prostaglandins following the sequence: progesterone > PGF1-alpha =
PGE1 > PGA1 > PGE2 >> PGD2. The primary effect of progesterone activation is to shift voltage dependence towards more
physiological, negative membrane potentials; it is not mediated by metabotropic receptors and second messengers. Sperm
capacitation enhances the effect of progesterone by providing additional negative shift. Also activated by the
elevation of intracellular pH

Gene Wiki entry for CATSPER1 (CatSper1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_167190.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CATSPER1 gene promoter:
         Max1   NF-1/L   NF-1   Elk-1   Pax-5   E47   STAT3   Hand1   FOXO1a   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCATSPER1 promoter sequence
   Search SABiosciences Chromatin IP Primers for CATSPER1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CATSPER1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q12.1   Ensembl cytogenetic band:  11q13.1   HGNC cytogenetic band: 11q12.1

CATSPER1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CATSPER1 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11M065784:  view genomic region     (about GC identifiers)

Start:
65,784,223 bp from pter      End:
65,793,988 bp from pter
Size:
9,766 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5 (See protein sequence)
Recommended Name: Cation channel sperm-associated protein 1  
Size: 780 amino acids; 90091 Da
Subunit: Heterotetramer; possibly composed of CATSPER1, CATSPER2, CATSPER3 and CATSPER4 (Potential). Component of the
CatSper complex. Interacts with CATSPER3 and CATSPER4 (By similarity). Interacts with Ca(v)3.3/CACNA1I, leading to
suppress T-type calcium channel activity
Subcellular location: Cell projection, cilium, flagellum membrane; Multi-pass membrane protein. Note=Specifically
located in the principal piece of sperm tail
Developmental stage: Expressed meiotically and post-meiotically
Secondary accessions: Q96P76

Explore the universe of human proteins at neXtProt for CATSPER1: NX_Q8NEC5

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8NEC5

  • CATSPER1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_444282.3  
    ENSEMBL proteins: 
     ENSP00000309052  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for CATSPER1 
    GenScript Custom Purified and Recombinant Proteins Services for CATSPER1
    Novus Biologicals CATSPER1 Proteins
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for CATSPER1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane ----
    GO:0005929cilium IEA--
    GO:0036128CatSper complex ISS--


    CATSPER1 for ontologies           About GeneDecksing



    CATSPER1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for CATSPER1 
    GenScript Custom Superior Antibodies Services for CATSPER1
    Novus Biologicals CATSPER1 Antibody
    Search for Antibodies for CATSPER1 at Abcam  
    Uscn Antibodies for CATSPER1
    Search ThermoFisher Antibodies for CATSPER1

    Assay Products for CATSPER1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for CATSPER1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for CATSPER1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CATSPER1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR005821 Ion_trans_dom

    Graphical View of Domain Structure for InterPro Entry Q8NEC5

    ProtoNet protein and cluster: Q8NEC5

    UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5
    Similarity: Belongs to the cation channel sperm-associated (TC 1.A.1.19) family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5
    Function: Voltage-gated calcium channel that plays a central role in calcium-dependent physiological responses
    essential for successful fertilization, such as sperm hyperactivation, acrosome reaction and chemotaxis towards the
    oocyte. Activated by extracellular progesterone and prostaglandins following the sequence: progesterone > PGF1-alpha =
    PGE1 > PGA1 > PGE2 >> PGD2. The primary effect of progesterone activation is to shift voltage dependence towards more
    physiological, negative membrane potentials; it is not mediated by metabotropic receptors and second messengers. Sperm
    capacitation enhances the effect of progesterone by providing additional negative shift. Also activated by the
    elevation of intracellular pH
    Induction: Down-regulated in patients lacking sperm motility

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CATSPER1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CATSPER1
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CATSPER1 (see all 4)
    OriGene shRNA RFP: CATSPER1
    OriGene siRNA: CATSPER1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CATSPER1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for CATSPER1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CATSPER1 (NM_053054)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CATSPER1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CATSPER1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for CATSPER1
    Search LifeMap BioReagents cell lines for CATSPER1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CATSPER1

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005245voltage-gated calcium channel activity IEA--
    GO:0005515protein binding IPI16740636


    CATSPER1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for CATSPER1:
     Synthetic lethal with Ras 

    Animal Models:
         Mouse knock-out Catsper1tm1Clph for CATSPER1
         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Catsper1):
     homeostasis/metabolism  reproductive system 

    CATSPER1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Sodium channels and transporters: inward current
    Sodium channels and transporters: inward current1.00
    2Sweet Taste Signaling
    Sperm Motility0.36

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for CATSPER1
        Sodium channels and transporters- inward current

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for CATSPER1
        Sperm Motility



    CATSPER1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CATSPER1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/45 Interacting proteins for CATSPER1 (Q8NEC51, 2, 3 ENSP000003090524) via UniProtKB, MINT, STRING, and/or I2D (see all 45)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    EFEMP2O959672, 3, ENSP000003099534MINT-66532 I2D: score=3 STRING: ENSP00000309953
    CACNA1IQ9P0X41, 3, ENSP000003850194EBI-744545,EBI-1220829 I2D: score=1 STRING: ENSP00000385019
    CHIC2Q9UKJ52, 3, ENSP000002639214MINT-68252 I2D: score=4 STRING: ENSP00000263921
    KRTAP4-12Q9BQ662, 3, ENSP000003775824MINT-68285 I2D: score=4 STRING: ENSP00000377582
    TRIP6Q156542, 3, ENSP000002004574MINT-67180 I2D: score=4 STRING: ENSP00000200457
    About this table

    Gene Ontology (GO): 5/9 biological process terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001539ciliary or flagellar motility IEA--
    GO:0006816calcium ion transport ----
    GO:0007275multicellular organismal development IEA--
    GO:0007283spermatogenesis IEA--
    GO:0007342fusion of sperm to egg plasma membrane IEA--


    CATSPER1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CATSPER1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CATSPER1

    1 HMDB Compound for CATSPER1    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    1 Novoseek chemical compound relationship for CATSPER1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    calcium 27.7 2 16467839 (1)

    Search CenterWatch for drugs/clinical trials and news about CATSPER1 / CTSR1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CATSPER1 gene: 
    NM_053054.3  

    Unigene Cluster for CATSPER1:

    Cation channel, sperm associated 1
    Hs.189105  [show with all ESTs]
    Unigene Representative Sequence: NM_053054
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000312106(uc001ogt.3) ENST00000529244

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CATSPER1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CATSPER1
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CATSPER1 (see all 4)
    OriGene shRNA RFP: CATSPER1
    OriGene siRNA: CATSPER1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CATSPER1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: CATSPER1 (NM_053054)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for CATSPER1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CATSPER1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CATSPER1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CATSPER1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CATSPER1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CATSPER1

    Additional cDNA sequence: 

    AF407333.1 BC032950.2 BC036522.2 

    1 DOTS entry:

    DT.100019352 

    24/29 AceView cDNA sequences (see all 29):

    AF407333 BI463921 BQ433031 AA416682 BM559902 BU631501 BC036522 BC032950 
    NM_053054 BU601108 CD635486 BM987175 BG719591 AA416577 CD635482 CD635489 
    CD635487 AA884212 CD635484 CD635494 CD635493 CD635491 CD635483 CD635492 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CATSPER1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ACTGAGAAGC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See CATSPER1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CATSPER1

    SOURCE GeneReport for Unigene cluster: Hs.189105

    UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5
    Tissue specificity: Testis-specific

        SABiosciences Custom PCR Arrays for CATSPER1
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CATSPER1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CATSPER1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CATSPER1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CATSPER1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CATSPER1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for CATSPER1 gene from 2/7 species (see all 7)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Catsper11 , 5 cation channel, sperm associated 11, 5 67.43(n)1
    57.82(a)1
      19 (4.30 cM)5
    2258651  NM_139301.21  NP_647462.11 
     53357415 
    lizard
    (Anolis carolinensis)
    Reptilia CATSPER16
    --
    47(a)
    1 ↔ 1
    GL343832.1(42690-59142)


    ENSEMBL Gene Tree for CATSPER1 (if available)
    TreeFam Gene Tree for CATSPER1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CATSPER1 gene
    CATSPER22  CATSPER42  CATSPER32  
    2 SIMAP similar genes for CATSPER1 using alignment to 1 protein entry:     CTSR1_HUMAN:
    SCN5A    SCN3A

    CATSPER1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/298 NCBI SNPs in CATSPER1 are shown (see all 298    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs5484951,2
    C,F,--65783737(+) TGGGGC/TTCTAG 1 -- ds50016Minor allele frequency- T:0.28NA WA EA 364
    rs125766021,2
    C,F,H,--65783782(+) ACCTCC/TGACCT 1 -- ds50011Minor allele frequency- T:0.33NA 6
    rs6682101,2
    C,F,H,--65783915(-) ACCCCG/AGGGTT 1 -- ds500123Minor allele frequency- A:0.35MN NS EA NA WA CSA 2535
    rs1384743941,2
    --65783942(+) TTTCTC/TCTGAC 1 -- ds50010--------
    rs1402502621,2
    C,--65784004(+) CCCTC-/CCG   
      GCACCG
    CCGGC
    1 -- ds50010--------
    rs1995796671,2
    C--65784011(+) GGCACC/TGCCGG 1 -- ds50010--------
    rs1906996471,2
    --65784034(+) GCCCAC/TGTTCT 1 -- ds50010--------
    rs1830371261,2
    --65784052(+) CCCTCC/TAGCTG 1 -- ds50010--------
    rs1142643151,2
    F,--65784065(+) GCTAAT/CGCCCT 1 -- ds50011Minor allele frequency- C:0.03WA 118
    rs1430972231,2
    --65784144(+) CAACAC/TGGGCA 1 -- ds50010--------

    HapMap Linkage Disequilibrium report for CATSPER1 (65784223 - 65793988 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CATSPER1: --
    Human Gene Mutation Database (HGMD): CATSPER1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CATSPER1
    DNA2.0 Custom Variant and Variant Library Synthesis for CATSPER1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CATSPER1 for disorders           About GeneDecksing

    OMIM gene information: 606389   
    OMIM disorders: 612997  
    UniProtKB/Swiss-Prot: CTSR1_HUMAN, Q8NEC5
  • Defects in CATSPER1 are the cause of spermatogenic failure type 7 (SPGF7) [MIM:612997]. An infertility
  • disorder characterized by non-motile sperm or sperm motility below the normal threshold, low sperm count, increased
    abnormally structured spermatozoa, and reduced semen volume

    4 diseases for CATSPER1:    About MalaCards
    male infertility    rhinotracheitis    infertility    spermatogenic failure

    1 disease from the University of Copenhagen DISEASES database for CATSPER1:
    Male infertility

    Export disorders for CATSPER1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CATSPER1 gene, integrated from 9 sources (see all 23):
    (articles sorted by number of sources associating them with CATSPER1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A sperm ion channel required for sperm motility and male fertility. (PubMed id 11595941)1, 2, 3 Ren D.... Clapham D.E. (2001)
    2. The expression and significance of CATSPER1 in human testis and ejaculated spermatozoa. (PubMed id 16625279)1, 2, 9 Li H.-G.... Xiong C.-L. (2006)
    3. Human male infertility caused by mutations in the CATSPER1 channel protein. (PubMed id 19344877)1, 2, 9 Avenarius M.R....Smith R.J. (2009)
    4. Progesterone activates the principal Ca2+ channel of human sperm. (PubMed id 21412339)1, 2 Lishko P.V.... Kirichok Y. (2011)
    5. The CatSper channel mediates progesterone-induced Ca2+ influx in human sperm. (PubMed id 21412338)1, 2 Strunker T.... Kaupp U.B. (2011)
    6. Association of Catsper1 or -2 with Ca(v)3.3 leads to suppression of T-type calcium channel activity. (PubMed id 16740636)1, 2 Zhang D.... Gopalakrishnan M. (2006)
    7. International Union of Pharmacology. L. Nomenclature and structure-function relationships of CatSper and two-pore channels. (PubMed id 16382101)1, 3 Clapham D.E. and Garbers D.L. (2005)
    8. CatSper gene expression in postnatal development of mouse testis and in subfertile men with deficient sperm motility. (PubMed id 14688170)1, 2 Nikpoor P.... Tiraihi T. (2004)
    9. A voltage-gated ion channel expressed specifically in spermatozoa. (PubMed id 11675491)1, 3 Quill T.A.... Garbers D.L. (2001)
    10. Expression of CatSper family transcripts in the mouse testis during post-natal development and human ejaculated spermatozoa: relationship to sperm motility. (PubMed id 17347248)2, 9 Li H.-G.... Xiong C.-L. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 117144 HGNC: 17116 AceView: CATSPER1 Ensembl:ENSG00000175294 euGenes: HUgn117144
    ECgene: CATSPER1 H-InvDB: CATSPER1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CATSPER1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CATSPER1 gene:
    Search GeneIP for patents involving CATSPER1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for CATSPER1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CATSPER1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CATSPER1  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for CATSPER1   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CATSPER1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for CATSPER1   OriGene Custom Protein Services for CATSPER1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CATSPER1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CATSPER1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CATSPER1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CATSPER1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CATSPER1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CATSPER1
     GenScript Custom Purified and Recombinant Proteins Services for CATSPER1 GenScript cDNA clones with any tag delivered in your preferred vector for CATSPER1
     GenScript Custom Assay Services for CATSPER1 GenScript Custom Superior Antibodies Services for CATSPER1
     GenScript Custom overexpressing Cell Line Services for CATSPER1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in CATSPER1 promoter
     Search Chromatin IP Primers for CATSPER1
     RT2 qPCR Primer Assay in human, mouse, rat CATSPER1
     GNC Network for CATSPER1
     SABiosciences PCR Arrays including human, mouse, rat CATSPER1
     Search Tocris compounds for CATSPER1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     CATSPER1 antibodies
     CATSPER1 proteins
     Search for Antibodies for CATSPER1 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for CATSPER1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     CATSPER1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for CATSPER1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CATSPER1
     Browse SwitchGear 3'UTR luciferase reporter plasmids for CATSPER1
     SwitchGear Promoter luciferase reporter plasmids for CATSPER1
     Search ThermoFisher Antibodies for CATSPER1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CATSPER1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      CATSPER1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4