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Aliases & Descriptions for CAT
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 1.11.1.6 3 | | MGC138422 2 | | MGC138424 2 | | catalase 2 |
| | |
| | Search outside databases for aliases for CAT genePrevious GC identifers: GC11P036013 GC11P035138 GC11P034499 GC11P034424 |
Summaries for CAT(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: CATA_HUMAN, P04040Function: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells including T-cells, B-cells, myeloid leukemia cells, melanoma cells, mastocytoma cells and normal and transformed fibroblast cellsGene Wiki entry for CAT (Catalase) |
Genomic Location for CAT
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CAT gene 
Entrez Gene cytogenetic band: 11p13 Ensembl cytogenetic band: 11p13 HGNC cytogenetic band: 11p13CAT Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P034417:
(about GC identifiers)
Start:
|
34,417,054 bp from pter |
End:
|
34,450,183 bp from pter |
Size:
|
33,130 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000011.8 NT_009237.17
| Proteins for CAT
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CATA_HUMAN, P04040 (See
protein sequence)Recommended Name: Catalase Size: 527 amino acids; 59756 Da
Cofactor: Heme group
Cofactor: NADP
Subunit: Homotetramer
Subcellular location: Peroxisome
PDB structures from and Proteopedia :1DGB (3D)
 1DGF (3D)
 1DGG (3D)
 1DGH (3D)
 1F4J (3D)
 1QQW (3D)
 
Secondary accessions: A8K6C0 B2RCZ9 Q2M1U4 Q4VXX5 Q9BWT9 Q9UC85Post-translational modifications:
The N-terminus is blocked1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001743.1
ENSEMBL proteins: ENSP00000241052
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: CAT 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CAT: Assays for CAT: | Protein
Domains/ Families for CAT(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P04040
ProtoNet protein and cluster: P04040 1 Blocks protein family: IPB002226 Catalase
UniProtKB/Swiss-Prot: CATA_HUMAN, P04040Similarity: Belongs to the catalase family | Gene Function for CAT
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001752
Applied Biosystems Silencer® siRNAs for CAT
Sigma-Aldrich siRNA and siRNA Panels for CAT  Sigma-Aldrich shRNA for CAT  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001752                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001752                                  untagged cDNA clone in CMV expression vector: NM_001752 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001752
UniProtKB/Swiss-Prot: CATA_HUMAN, P04040Function: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells including T-cells, B-cells, myeloid leukemia cells, melanoma cells, mastocytoma cells and normal and transformed fibroblast cellsCatalytic activity: 2 H(2)O(2) = O(2) + 2 H(2)OEnzyme Number (IUBMB): EC 1.11.1.6 Genatlas biochemistry entry for CAT:catalase,60kDa,peroxisomal,expressed in erythrocytes,liver,kidney,catabolic pathway of activated oxygen species,free radical detoxification2 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Cat):
5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7
): About this table | Pathways & Interactions for CAT
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for CAT (Your Favorite Gene powered by Ingenuity) (see all 8
) 
Gene Network CentralTM Interacting Genes and Proteins Network for CAT 
5/91 Interacting proteins for CAT (P040402 ENSP000002410523) via UniProtKB, MINT, and/or STRING (see all 91
)About this table
5/14 Gene Ontology (GO) biological process terms (links to tree view) (see all 14
): About this table
|
Drugs & Compounds for CAT(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CAT 10/46 Novoseek chemical compound relationships for CAT gene (see all 46
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| superoxide |
96.45 |
4128 |
2313035 (6), 17240813 (5), 7551811 (5), 10591066 (4) (see all 99) |
| oxygen |
89.20 |
670 |
10628300 (7), 8720898 (4), 11368853 (4), 8082230 (3) (see all 99) |
| malondialdehyde |
87.03 |
1018 |
18778500 (5), 17319275 (5), 17190187 (5), 16112416 (4) (see all 99) |
| xanthine |
82.43 |
155 |
16130269 (3), 8710749 (2), 16112416 (2), 17571208 (2) (see all 94) |
| deferoxamine |
82.03 |
166 |
11316574 (3), 1647676 (3), 1958348 (2), 7672482 (2) (see all 99) |
| manganese superoxide |
81.06 |
115 |
8180777 (3), 15258423 (2), 8967746 (2), 8550376 (2) (see all 90) |
| lipid |
80.37 |
567 |
17307156 (5), 9848047 (3), 10773913 (3), 11225659 (2) (see all 99) |
| dmpo |
79.03 |
24 |
2176255 (2), 2170352 (1), 8314113 (1), 16443166 (1) (see all 15) |
| thiobarbituric acid |
77.26 |
127 |
17009203 (2), 10064127 (2), 1705818 (1), 1650719 (1) (see all 83) |
| 8-oxo-dg |
77.08 |
31 |
11062173 (1), 11409938 (1), 12423653 (1), 18980879 (1) (see all 22) |
About this table
|
Transcripts for CAT(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001752
Sigma-Aldrich siRNA and siRNA Panels for CAT  Sigma-Aldrich shRNA for CAT  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001752 REFSEQ mRNAs for CAT gene: NM_001752.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001752               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001752                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001752                                  untagged cDNA clone in CMV expression vector: NM_001752  Additional cDNA sequence: AK022134.1 AK291585.1 AK301577.1 AK310184.1 AK315350.1 AY028632.1 BC027300.1 BC110398.1 BC112217.1 BC112219.1 CR591917.1 CR595503.1 CR597192.1 CR602251.1 CR609505.1 CR613834.1 X04076.1 23 DOTS entries: DT.219562 DT.100819495 DT.95261355 DT.100819489 DT.219561 DT.97835365 DT.92453028 DT.120738830 DT.219557 DT.219563 DT.95261357 DT.100819488 DT.100819491 DT.120738832 DT.449665 DT.92406951 DT.100819490 DT.75112267 DT.92453018 DT.95261354 DT.99970908 DT.100738129 DT.97858318 24/412 AceView cDNA sequences (see all 412
):AL545053 CB162046 CR591917 AI753159 AW768666 CR602251 CD356537 CR595503 BQ223611 BF593978 BC027300 H08508 CR613834 CR609505 BU686348 AW074278 R29244 AA235275 BG697373 AA379512 BQ576174 CA748580 BE045822 AA310030
highest scoring ESTs for CAT:AA022516 AA127891 AA129112 AA281208 AA283011 AA447929 AA448865 AA469091 AA614808 AA627853 Unigene Cluster for CAT: Catalase Hs.502302 [show with all ESTs]Unigene Representative Sequence: NM_001752
GeneLoc Exon Structure
5/12 Alternative Splicing Database (ASD) splice patterns (SP) for CAT (see all 12
)
| ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8a | · | 8b | · | 8c | ^ | 9a | · | 9b | · | 9c | · | 9d | ^ | 10 | ^ | 11a | · | 11b | · | 11c | ^ | 12 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | - |   | |   | - |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | - |   | |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 13a | · | 13b | |
| SP1: | |   | |   | |
| SP2: | |   | |   | |
| SP3: | |   | |   | |
| SP4: | |   | |   | |
| SP5: | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CAT
1 Ensembl transcript including schematic representation: ENST00000241052
|
Expression for CAT
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CAT expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CAT
1 / 2 / 3 7 probe-sets matching CAT gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GCTTAATGTT
SOURCE GeneReport for Unigene cluster: Hs.502302
Expression variation in blood from EXPOLDB for CAT |
Orthologs for CAT
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CAT gene from 5/25 species (see all 25
)
About this table Species with no ortholog for CAT
ENSEMBL Gene Tree for CAT | Paralogs for CAT(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for CAT(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CAT (up to first 250kb)
|
Disorders & Mutations for CAT
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 115500 UniProtKB/Swiss-Prot: CATA_HUMAN, P04040
Defects in CAT are the cause of acatalasia (ACATLAS) [MIM:115500]; also known as acatalasemia. This disease is characterized by absence of catalase activity in red cells and is often associated with ulcerating oral lesions10/93 Novoseek disease relationships for CAT gene (see all 93
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| acatalasemia |
77.53 |
12 |
19122680 (2), 1999334 (2), 11001624 (1), 11197178 (1) (see all 8) |
| zellweger syndrome |
72.03 |
10 |
1946426 (3), 1651504 (1), 9408912 (1), 8931469 (1) (see all 7) |
| hypocatalasemia |
71.88 |
1 |
14996832 (1) |
| peroxisomal disorders |
67.02 |
2 |
2295968 (1), 8463903 (1) |
| cell damage |
66.56 |
30 |
11729237 (2), 14675044 (2), 1958348 (1), 8005512 (1) (see all 26) |
| adrenoleukodystrophy neonatal |
65.78 |
2 |
7687405 (1), 1689088 (1) |
| refsum disease infantile |
64.62 |
6 |
7510868 (2), 9408912 (1), 1689088 (1), 7687405 (1) |
| peroxisome biogenesis disorders |
60.46 |
4 |
10567403 (1), 15184617 (1), 10960480 (1) |
| granulomatous disease chronic |
58.47 |
6 |
9864180 (1), 15135177 (1), 1370724 (1), 12706409 (1) (see all 6) |
| vitiligo |
54.85 |
66 |
11837458 (7), 19439879 (4), 18315617 (4), 17433173 (3) (see all 29) |
About this table
Genatlas disease: CAT acatalasia Human Gene Mutation Database: CAT Genetic Association Database: CAT Human Genome Epidemiology Navigator: CAT (165 documents)
|
Medical News for CAT(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for CAT (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/2337 PubMed articles for CAT gene (see all 2337
):- Association of CAT polymorphisms with catalase activity and exposure to environmental oxidative stimuli. (PubMed id 16298864)1, 3, 6 Nadif R....Kauffmann F. (2005)
- Genetic association of the catalase gene (CAT) with vitiligo susceptibility. (PubMed id 11837458)1, 3, 6 Casp C.B....McCormack W.T. (2002)
- Genetic polymorphisms of oxidative and antioxidant enzymes and arsenic-related hypertension. (PubMed id 16076760)1, 3, 6 Hsueh Y.M....Chen C.J. (2005)
- [Associative analysis of the connection between mutation C1167T in the catalase gene and polymorphic marker D6S392 nearby the Mn-dependent superoxide dismutase gene with diabetic microangiopathies] (PubMed id 12469627)1, 3, 6 Chistiakov D.A....Debabov V.G. (2002)
- Vulnerability of the human airway epithelium to hyperoxia. Constitutive expression of the catalase gene in human bronchial epithelial cells despite oxidant stress. (PubMed id 8282800)1, 3, 4 Yoo J.-H.... Crystal R.G. (1994)
- A testing framework for identifying susceptibility genes in the presence of epistasis. (PubMed id 16385446)1, 3, 6 Millstein J....Gauderman W.J. (2006)
- Genetic polymorphisms of GSTT1, GSTM1, GSTP1, MnSOD, and catalase in nonhereditary chronic pancreatitis: evidence of xenobiotic stress and impaired antioxidant capacity. (PubMed id 16047490)1, 3, 6 Rahman S.H....McMahon M.J. (2005)
- Polymorphisms in genes related to oxidative stress (MPO, MnSOD, CAT) and survival after treatment for breast cancer. (PubMed id 15705913)1, 3, 6 Ambrosone C.B....Trovato A. (2005)
- [Search for the association of polymorphic markers for genes coding for antioxidant defense enzymes, with development of diabetic polyneuropathies in patients with type 1 diabetes mellitus] (PubMed id 15125229)1, 3, 6 Zotova E.V....Nosikov V.V. (2004)
- Association of antioxidant enzyme gene polymorphisms and glutathione status with severe acute pancreatitis. (PubMed id 15131792)1, 3, 6 Rahman S.H....McMahon M.J. (2004)
|
Search for CAT
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CAT
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CAT
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CAT(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CAT(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CAT:

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