Aliases for CASZ1 Gene
Aliases for CASZ1 Gene
External Ids for CASZ1 Gene
- HGNC: 26002
- Entrez Gene: 54897
- Ensembl: ENSG00000130940
- OMIM: 609895
- UniProtKB: Q86V15
Previous GeneCards Identifiers for CASZ1 Gene
- GC01M009850
Summaries for CASZ1 Gene
-
The protein encoded by this gene is a zinc finger transcription factor. The encoded protein may function as a tumor suppressor, and single nucleotide polymorphisms in this gene are associated with blood pressure variation. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jul 2012]
GeneCards Summary for CASZ1 Gene
CASZ1 (Castor Zinc Finger 1) is a Protein Coding gene. Diseases associated with CASZ1 include Chromosome 1P36 Deletion Syndrome and Retroperitoneal Sarcoma.
UniProtKB/Swiss-Prot for CASZ1 Gene
-
Transcriptional activator (PubMed:23639441, PubMed:27693370). Involved in vascular assembly and morphogenesis through direct transcriptional regulation of EGFL7 (PubMed:23639441).
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASZ1 Gene
Genomics for CASZ1 Gene
Regulatory Elements for CASZ1 Gene
Regulatory Element Products
Genomic Location for CASZ1 Gene
- Chromosome:
- 1
- Start:
- 10,636,604 bp from pter
- End:
- 10,796,676 bp from pter
- Size:
- 160,073 bases
- Orientation:
- Minus strand
Genomic View for CASZ1 Gene
- Cytogenetic band:
-
- 1p36.22 by Ensembl
- 1p36.22 by Entrez Gene
- 1p36.22 by HGNC
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CASZ1 Gene
Proteins for CASZ1 Gene
-
Protein details for CASZ1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q86V15-CASZ1_HUMAN
- Recommended name:
- Zinc finger protein castor homolog 1
- Protein Accession:
- Q86V15
- Q078S9
- Q2EN02
- Q5T9S1
- Q6ZNM8
- Q8WX49
- Q8WX50
- Q9BT16
- Q9NXC6
Protein attributes for CASZ1 Gene
- Size:
- 1759 amino acids
- Molecular mass:
- 190069 Da
- Quaternary structure:
- No Data Available
- Miscellaneous:
-
- Endothelial cells depleted in CASZ1 by siRNAs display dramatic alterations in adhesion, morphology and sprouting; normal behavior can be rescued by restoration of EGFL7 expression. The defects are in part due to diminished RhoA expression and impaired focal adhesion localization.
- SequenceCaution:
-
- Sequence=ABD14411.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305}; Sequence=BAA91089.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAC85474.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};
Protein Expression for CASZ1 Gene
Post-translational modifications for CASZ1 Gene
Other Protein References for CASZ1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for CASZ1
- Novus Biologicals Antibodies for CASZ1
- Invitrogen Antibodies for CASZ1
- antibodies-online Antibodies for CASZ1: See all 42
- GeneTex CASZ1 antibody for CASZ1
-
Santa Cruz Biotechnology (SCBT) Antibodies for CASZ1
Protein Products
-
OriGene Purified Proteins for CASZ1
- Search Origene for MassSpec and Protein Over-expression Lysates for CASZ1
- Origene Custom Protein Services for CASZ1
- Search GeneTex for Proteins for CASZ1
Assay Products
No data available for DME Specific Peptides for CASZ1 Gene
Domains & Families for CASZ1 Gene
Gene Families for CASZ1 Gene
Protein Domains for CASZ1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for CASZ1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for UniProtKB/Swiss-Prot for CASZ1 Gene
Function for CASZ1 Gene
Molecular function for CASZ1 Gene
- UniProtKB/Swiss-Prot Function:
- Transcriptional activator (PubMed:23639441, PubMed:27693370). Involved in vascular assembly and morphogenesis through direct transcriptional regulation of EGFL7 (PubMed:23639441).
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | -- |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for CASZ1 Gene
- MGI mutant phenotypes for CASZ1:
- inferred from 3 alleles
- GenomeRNAi human phenotypes for CASZ1:
Animal Models for CASZ1 Gene
- MGI Knock Outs for CASZ1:
-
- Casz1 tm1b(EUCOMM)Hmgu
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CASZ1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for CASZ1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CASZ1 gene
- Search ViGene Biosciences for CASZ1
CRISPR Products
-
OriGene CRISPR knockouts for CASZ1
-
Santa Cruz Biotechnology (SCBT) CRISPR for CASZ1
- GenScript: Design CRISPR guide RNA sequences for CASZ1
miRNA for CASZ1 Gene
- miRTarBase miRNAs that target CASZ1
-
- hsa-mir-151a-5p (MIRT053612)
- hsa-mir-4665-3p (MIRT487870)
- hsa-mir-486-3p (MIRT487871)
- hsa-mir-6825-5p (MIRT487872)
- hsa-mir-6883-5p (MIRT487873)
- hsa-mir-6785-5p (MIRT487874)
- hsa-mir-4728-5p (MIRT487875)
- hsa-mir-149-3p (MIRT487876)
- hsa-mir-885-3p (MIRT487877)
- hsa-mir-4706 (MIRT487878)
- hsa-mir-4749-5p (MIRT487879)
- hsa-mir-3195 (MIRT487880)
- hsa-mir-3648 (MIRT487881)
- hsa-mir-423-5p (MIRT487882)
- hsa-mir-3184-5p (MIRT487883)
- hsa-mir-6775-5p (MIRT487884)
- hsa-mir-5090 (MIRT487885)
- hsa-mir-6889-5p (MIRT487886)
- hsa-mir-6777-5p (MIRT487887)
- hsa-mir-1908-3p (MIRT487888)
- hsa-mir-6784-5p (MIRT487889)
- hsa-mir-7975 (MIRT549031)
- hsa-mir-4540 (MIRT549032)
- hsa-mir-524-5p (MIRT549033)
- hsa-mir-520d-5p (MIRT549034)
- hsa-mir-4670-3p (MIRT549035)
- hsa-mir-648 (MIRT549036)
- hsa-mir-6838-3p (MIRT549037)
- hsa-mir-4517 (MIRT549038)
- hsa-mir-19b-3p (MIRT549039)
- hsa-mir-19a-3p (MIRT549040)
- hsa-mir-574-5p (MIRT569200)
- hsa-mir-4455 (MIRT569201)
- hsa-mir-5010-3p (MIRT569202)
- hsa-mir-147a (MIRT569203)
- hsa-mir-8068 (MIRT569204)
- hsa-mir-6818-5p (MIRT569205)
- hsa-mir-6867-5p (MIRT569206)
- hsa-mir-33a-3p (MIRT569207)
miRNA Products
- Search ViGene Biosciences for CASZ1
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CASZ1
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-
ViGene Biosciences ready-to-package AAV shRNAs for CASZ1 gene
Clone Products
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CASZ1
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-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for CASZ1
-
ViGene Biosciences adenoviral particle packaged cDNA for CASZ1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for CASZ1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CASZ1 gene
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for CASZ1 Gene
Localization for CASZ1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for CASZ1 Gene
- Nucleus.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IEA | -- |
| GO:0005654 | nucleoplasm | IDA | -- |
| GO:0005829 | cytosol | IDA | -- |
| GO:0043231 | intracellular membrane-bounded organelle | IDA | -- |
Pathways & Interactions for CASZ1 Gene
Interacting Proteins for CASZ1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006351 | transcription, DNA-templated | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
| GO:0007275 | multicellular organism development | IEA | -- |
| GO:0045664 | regulation of neuron differentiation | IBA | -- |
| GO:0045893 | positive regulation of transcription, DNA-templated | IDA | 27693370 |
No data available for Pathways by source and SIGNOR curated interactions for CASZ1 Gene
Transcripts for CASZ1 Gene
mRNA/cDNA for CASZ1 Gene
- (8) REFSEQ mRNAs :
- (10) Additional mRNA sequences :
- (64) Selected AceView cDNA sequences:
- (9) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for CASZ1 Gene
- Castor zinc finger 1:
- Representative Sequences:
CRISPR Products
-
OriGene CRISPR knockouts for CASZ1
-
Santa Cruz Biotechnology (SCBT) CRISPR for CASZ1
- GenScript: Design CRISPR guide RNA sequences for CASZ1
miRNA Products
- Search ViGene Biosciences for CASZ1
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CASZ1
- Browse OriGene Inhibitory RNA Products For CASZ1
-
ViGene Biosciences ready-to-package AAV shRNAs for CASZ1 gene
Clone Products
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CASZ1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CASZ1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CASZ1 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Limb (Muscoskeletal System)
- Limb Muscle Progenitor Cells Forelimb Myotome
-
Skeletal Muscle (Muscoskeletal System)
- Limb Muscle Progenitor Cells Forelimb Myotome
- Adipose (Muscoskeletal System)
- Bone (Muscoskeletal System)
- Cartilage (Muscoskeletal System)
-
Eye (Sensory Organs)
mRNA differential expression in normal tissues according to GTEx for CASZ1 Gene
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CASZ1 Gene
NURSA nuclear receptor signaling pathways regulating expression of CASZ1 Gene:
CASZ1SOURCE GeneReport for Unigene cluster for CASZ1 Gene:
Hs.439894mRNA Expression by UniProt/SwissProt for CASZ1 Gene:
Q86V15-CASZ1_HUMANEvidence on tissue expression from TISSUES for CASZ1 Gene
- Heart(4.3)
- Intestine(4.3)
- Pancreas(4.2)
Primer Products
-
OriGene qPCR primer pairs and template standards for CASZ1
-
OriGene qPCR primer pairs for CASZ1
No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for CASZ1 Gene
Orthologs for CASZ1 Gene
This gene was present in the common ancestor of animals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | CASZ1 34 35 |
|
||
| cow (Bos Taurus) |
Mammalia | CASZ1 34 35 |
|
||
| dog (Canis familiaris) |
Mammalia | CASZ1 34 35 |
|
||
| mouse (Mus musculus) |
Mammalia | Casz1 34 16 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Casz1 34 |
|
||
| platypus (Ornithorhynchus anatinus) |
Mammalia | CASZ1 35 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | CASZ1 35 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | CASZ1 34 35 |
|
||
| lizard (Anolis carolinensis) |
Reptilia | CASZ1 35 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | casz1 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | casz1 34 35 |
|
||
| wufc21h10 34 |
|
||||
| fruit fly (Drosophila melanogaster) |
Insecta | cas 35 |
|
OneToMany | |
| CG7512 35 |
|
OneToMany | |||
| sea squirt (Ciona savignyi) |
Ascidiacea | -- 35 |
|
OneToMany | |
| CSA.2018 35 |
|
OneToMany |
- Species where no ortholog for CASZ1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for CASZ1 Gene
Pseudogenes.org Pseudogenes for CASZ1 Gene
No data available for Paralogs for CASZ1 Gene
Variants for CASZ1 Gene
| SNP ID | Clin | Chr 01 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000005027 | -- | 10,675,696(+) | CTACC(A/C)CTGCC | intron-variant | |
| rs1000041809 | -- | 10,645,549(+) | CTGCC(C/T)TTAGT | intron-variant | |
| rs1000055969 | -- | 10,671,037(+) | TGGGG(A/G)GCATG | intron-variant | |
| rs1000065042 | -- | 10,772,153(+) | CTCTG(A/G)TTGCC | intron-variant | |
| rs1000065352 | -- | 10,727,503(+) | CCACC(C/T)TCTGA | intron-variant |
Relevant External Links for CASZ1 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CASZ1 Gene
Disorders for CASZ1 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| chromosome 1p36 deletion syndrome |
|
|
| retroperitoneal sarcoma |
|
|
| retroperitoneum carcinoma |
|
|
Relevant External Links for CASZ1
No data available for UniProtKB/Swiss-Prot and Genatlas for CASZ1 Gene
Publications for CASZ1 Gene
- Molecular cloning and characterization of human Castor, a novel human gene upregulated during cell differentiation. (PMID: 16631614) Liu Z. … Thiele C.J. (Biochem. Biophys. Res. Commun. 2006) 2 3 4 64
- CASZ1 loss-of-function mutation associated with congenital heart disease. (PMID: 27693370) Huang R.T. … Yang Y.Q. (Gene 2016) 3 4 64
- CASZ1, a candidate tumor-suppressor gene, suppresses neuroblastoma tumor growth through reprogramming gene expression. (PMID: 21252912) Liu Z. … Thiele C.J. (Cell Death Differ. 2011) 2 3 64
- Meta-analysis of genome-wide association studies identifies common variants associated with blood pressure variation in east Asians. (PMID: 21572416) Kato N. … He J. (Nat. Genet. 2011) 3 46 64
- Blood pressure and hypertension are associated with 7 loci in the Japanese population. (PMID: 20479155) Takeuchi F. … Kato N. (Circulation 2010) 3 46 64
Products for CASZ1 Gene
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- Custom Antibody ServicesOriGene Antibodies for CASZ1
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- VectorBuilder custom plasmid, inducible vectors for CASZ1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CASZ1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CASZ1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
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- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
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- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
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- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer




