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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CASQ2 Gene

protein-coding   GIFtS: 63
GCID: GC01M116242

calsequestrin 2 (cardiac muscle)

 Explore 10 diseases affiliated with
CASQ2 via our new
 Human Malady Compendium 
Biological research products
for CASQ2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Calsequestrin 2 (Cardiac Muscle)1 2
PDIB21 2
Calsequestrin, Cardiac Muscle Isoform2 3
Calsequestrin 2, Fast-Twitch, Cardiac Muscle2
Calsequestrin-21

External Ids:    HGNC: 15131   Entrez Gene: 8452   Ensembl: ENSG000001187297   OMIM: 1142515   UniProtKB: O149583   

Export aliases for CASQ2 gene to outside databases

Previous GC identifers: GC01M116655 GC01M115124 GC01M115390 GC01M115589 GC01M115954 GC01M116044 GC01M114100


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CASQ2:
The protein encoded by this gene specifies the cardiac muscle family member of the calsequestrin family. Calsequestrin
is localized to the sarcoplasmic reticulum in cardiac and slow skeletal muscle cells. The protein is a calcium binding
protein that stores calcium for muscle function. Mutations in this gene cause stress-induced polymorphic ventricular
tachycardia, also referred to as catecholaminergic polymorphic ventricular tachycardia 2 (CPVT2), a disease
characterized by bidirectional ventricular tachycardia that may lead to cardiac arrest. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: CASQ2_HUMAN, O14958
Function: Calsequestrin is a high-capacity, moderate affinity, calcium-binding protein and thus acts as an internal
calcium store in muscle. The release of calcium bound to calsequestrin through a calcium release channel triggers
muscle contraction. The skeletal muscle isoform (CASQ1) binds around 80 Ca(2+) ions, while the cardiac isoform (CASQ2)
binds approximately 60 Ca(2+) ions




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_032977.9  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CASQ2 gene promoter:
         HOXA9   HOXA9B   JunB   Olf-1   Meis-1b   MEF-2A   JunD   HSF2   aMEF-2   Meis-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCASQ2 promoter sequence
   Search SABiosciences Chromatin IP Primers for CASQ2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CASQ2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p13.1   Ensembl cytogenetic band:  1p13.1   HGNC cytogenetic band: 1p13.1

CASQ2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CASQ2 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M116242:  view genomic region     (about GC identifiers)

Start:
116,242,624 bp from pter      End:
116,311,426 bp from pter
Size:
68,803 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CASQ2_HUMAN, O14958 (See protein sequence)
Recommended Name: Calsequestrin-2 precursor  
Size: 399 amino acids; 46436 Da
Subunit: Monomer, homodimer and homooligomer. Mostly monomeric in the absence of calcium. Forms higher oligomers in a
calcium-dependent manner. Dimers associate to form tetramers, that then form linear homopolymer chains
Subcellular location: Sarcoplasmic reticulum lumen. Note=This isoform of calsequestrin occurs in the sarcoplasmic
reticulum's terminal cisternae luminal spaces of cardiac and slow skeletal muscle cells
1 PDB 3D structure from and Proteopedia for CASQ2:
2VAF (3D)    
Secondary accessions: B2R7M6 Q5T1D2 Q8TBW8

Explore the universe of human proteins at neXtProt for CASQ2: NX_O14958

Post-translational modifications:

  • Phosphorylation in the C-terminus, probably by CK2, moderately increases calcium buffering capacity1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O14958

  • CASQ2 Protein expression data from MOPED and PaxDb:    About this image 
    CASQ2 Protein Expression
    REFSEQ proteins: NP_001223.2  
    ENSEMBL proteins: 
     ENSP00000261448   ENSP00000403858  
    Reactome Protein details: O14958
    Human Recombinant Protein Products for CASQ2: 
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    Novus Biologicals CASQ2 Proteins
    Novus Biologicals CASQ2 Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for CASQ2
    Uscn Proteins for CASQ2

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular IMP16908766
    GO:0005891colocalizes with voltage-gated calcium channel complex ISS--
    GO:0014701junctional sarcoplasmic reticulum membrane TAS17569730
    GO:0016529sarcoplasmic reticulum ISS--
    GO:0030018Z disc ISS--

    CASQ2 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CASQ2 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR001393 Calsequestrin
     IPR012336 Thioredoxin-like_fold
     IPR018233 Calsequestrin_CS

    Graphical View of Domain Structure for InterPro Entry O14958

    ProtoNet protein and cluster: O14958

    1 Blocks protein family: IPB001393 Calsequestrin

    UniProtKB/Swiss-Prot: CASQ2_HUMAN, O14958
    Similarity: Belongs to the calsequestrin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: CASQ2_HUMAN, O14958
    Function: Calsequestrin is a high-capacity, moderate affinity, calcium-binding protein and thus acts as an internal
    calcium store in muscle. The release of calcium bound to calsequestrin through a calcium release channel triggers
    muscle contraction. The skeletal muscle isoform (CASQ1) binds around 80 Ca(2+) ions, while the cardiac isoform (CASQ2)
    binds approximately 60 Ca(2+) ions

         Genatlas biochemistry entry for CASQ2:
    calsequestrin 2,44kDa,fast twitch,cardiac muscle (calcium storage protein in terminal cisternae os sarcoplasmic
    reticulum)

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005509calcium ion binding IDA16601229
    GO:0005515protein binding ----
    GO:0042803protein homodimerization activity ISS--
         
    CASQ2 for ontologies           About GeneDecksing


    Phenotypes:
         3 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Casq2):
     cardiovascular system  homeostasis/metabolism  muscle 

    CASQ2 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for CASQ2: Casq2tm1Klmn Casq2tm2Jse
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CASQ2 

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    hsa-miR-607 hsa-miR-200c* hsa-miR-550a* hsa-miR-124 hsa-miR-466 hsa-miR-3920 hsa-miR-506 hsa-miR-626
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CASQ2


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ion channel transport
    Ion channel transport1.00
    Stimuli-sensing channels0.49
    2Antiarrhythmic Pathway, Pharmacodynamics
    Antiarrhythmic Pathway, Pharmacodynamics1.00
    3Calcium Regulation in the Cardiac Cell
    Calcium Regulation in the Cardiac Cell1.00
    4SLC-mediated transmembrane transport
    Transmembrane transport of small molecules0.50

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for CASQ2 
        Calcium Regulation in the Cardiac Cell

    3        Reactome Pathways for CASQ2
        Transmembrane transport of small molecules
    Stimuli-sensing channels
    Ion channel transport

    1 PharmGKB Pathway for CASQ2
        Antiarrhythmic Pathway, Pharmacodynamics


    CASQ2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CASQ2

    STRING Interaction Network Preview (showing 4 interactants - click image to see more details)

    5/9 Interacting proteins for CASQ2 (O149583 ENSP000002614484) via UniProtKB, MINT, STRING, and/or I2D (see all 9)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ANKRD1Q153273, ENSP000003607624I2D: score=1 STRING: ENSP00000360762
    CSNK2A2P197843, ENSP000002625064I2D: score=1 STRING: ENSP00000262506
    CSNK2A1P684003, ENSP000002172444I2D: score=1 STRING: ENSP00000217244
    TRDNQ130613I2D: score=2 
    PRKCBP057713I2D: score=1 
    About this table

    Gene Ontology (GO): 5/12 biological process terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002027regulation of heart rate IMP16601229
    GO:0006941striated muscle contraction TAS9795116
    GO:0010649regulation of cell communication by electrical coupling IMP16908766
    GO:0010880regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum ISS--
    GO:0010881regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion IMP16601229

    CASQ2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CASQ2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CASQ2

    1 HMDB Compound for CASQ2    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    4 Novoseek chemical compound relationships for CASQ2 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ryanodine 80.1 22 17607358 (2), 14571276 (1), 18052993 (1), 19121813 (1) (see all 13)
    calcium 50.5 36 15709687 (4), 16932808 (3), 16908766 (2), 14715535 (2) (see all 15)
    histidine 30.5 4 19649236 (1), 15176429 (1)
    aspartate 24.3 4 19649236 (1), 15176429 (1)

    Search CenterWatch for drugs/clinical trials and news about CASQ2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CASQ2 gene: 
    NM_001232.3  

    Unigene Cluster for CASQ2:

    Calsequestrin 2 (cardiac muscle)
    Hs.57975  [show with all ESTs]
    Unigene Representative Sequence: NM_001232
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000261448(uc001efx.4 uc010owu.2) ENST00000460136 ENST00000488931
    ENST00000456138

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    hsa-miR-607 hsa-miR-200c* hsa-miR-550a* hsa-miR-124 hsa-miR-466 hsa-miR-3920 hsa-miR-506 hsa-miR-626
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    Additional cDNA sequence: 

    AK129831.1 AK129891.1 AK225959.1 AK293595.1 AK295502.1 AK313041.1 BC022288.1 D55655.1 

    6 DOTS entries:

    DT.112191  DT.102823995  DT.121333583  DT.121333598  DT.99963614  DT.91654404 

    24/78 AceView cDNA sequences (see all 78):

    BF725765 AI932721 CF551835 AK129831 F30464 BF574681 AI243323 BM679349 
    W68692 AW590420 F36930 AI055944 AW135354 AI969998 CF551947 AW955775 
    AJ708701 AW513777 BU743045 AI185764 CD679250 BM720644 AW075319 BM718605 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for CASQ2    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12
    SP1:                                -                                                         
    SP2:        -                       -                                                         
    SP3:                                                                                          


    ECgene alternative splicing isoforms for CASQ2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CASQ2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TGTAAGACAC
    CASQ2 Expression
    About this image

    CASQ2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Reproductive SystemMesonephrosReproductive System
    TestisSeminiferous TubulesTestis
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    PureStem™ progenitor SK17 (Embryonic Progenitor Cell)
    White adipocyte-like cells (Differentiation of ...)Adipose

    See CASQ2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CASQ2

    SOURCE GeneReport for Unigene cluster: Hs.57975
        SABiosciences Custom PCR Arrays for CASQ2
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CASQ2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for CASQ2 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CASQ21 calsequestrin 2 (cardiac muscle) 78.7(n)
    79.95(a)
      395198  NM_204526.1  NP_989857.1 
    lizard
    (Anolis carolinensis)
    Reptilia CASQ26
    --
    71(a)
    1 ↔ 1
    2(82842695-82896094)
    African clawed frog
    (Xenopus laevis)
    Amphibia LOC3984242 similar to calsequestrin 2 (cardiac muscle) 77.65(n)    BC041283.1 
    zebrafish
    (Danio rerio)
    Actinopterygii casq21 calsequestrin 2 71.49(n)
    70.05(a)
      114410  NM_001002682.1  NP_001002682.1 
    worm
    (Caenorhabditis elegans)
    Secernentea csq-16
    CalSeQuestrin family member (csq-1)
    29(a)
    1 → many
    X(14684806-14688296)


    ENSEMBL Gene Tree for CASQ2 (if available)
    TreeFam Gene Tree for CASQ2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CASQ2 gene
    CASQ12  
    1 SIMAP similar gene for CASQ2 using alignment to 3 protein entries:     CASQ2_HUMAN (see all proteins):
    CASQ1

    CASQ2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1523 NCBI SNPs in CASQ2 are shown (see all 1523    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs287307161,2
    C,Fprobable-pathogenic114127726(-) GGAACA/GCCAAA 2 H R mis1 ese35Minor allele frequency- G:0.03NS WA NA EU 5951
    rs745209621,2
    --114100927(+) GCACTT/CTGGGA 1 -- ut311Minor allele frequency- C:0.01WA 118
    rs287307091,2
    C,F--114101807(-) TTTGCG/ATCAGG 1 -- ut31 ese31Minor allele frequency- A:0.06EA 120
    rs725540691,2
    C,F--114102001(-) ATGATGAT/-AATTC 1 -- cds13Minor allele frequency- -:0.01CSA 326
    rs1156597861,2
    C,F--114102613(+) GACATT/GGNNNN 1 -- int11Minor allele frequency- G:0.02WA 118
    rs1131820541,2
    F--114103257(+) CACAAT/CGGCCC 1 -- int12Minor allele frequency- C:0.40CSA 5
    rs109232101,2
    C,F,H--114103450(+) GGAACC/TACAGA 1 -- int17Minor allele frequency- T:0.01NS EA WA 860
    rs287307141,2
    C--114103764(-) CGGGTG/TGGTCC 1 -- int12Minor allele frequency- T:0.08CSA WA 120
    rs767825491,2
    --114104336(+) AAACAC/TATAGA 1 -- int10--------
    rs750328781,2
    --114104878(+) AGATCA/CCTCTC 1 -- int10--------

    HapMap Linkage Disequilibrium report for CASQ2 (116242624 - 116311426 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for CASQ2
         3 CNVs: 64669 2322 3306
         1 Indel: 97477
    Human Gene Mutation Database (HGMD): CASQ2

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CASQ2 for disorders           About GeneDecksing

    OMIM gene information: 114251   
    OMIM disorders: 611938  
    UniProtKB/Swiss-Prot: CASQ2_HUMAN, O14958
  • Defects in CASQ2 are the cause of catecholaminergic polymorphic ventricular tachycardia type 2 (CPVT2)
  • [MIM:611938]; also known as stress-induced polymorphic ventricular tachycardia (VTSIP). CPVT2 is an autosomal
    recessive form of arrhythmogenic disorder characterized by stress-induced, bidirectional ventricular tachycardia that
    may degenerate into cardiac arrest and cause sudden death

    10 diseases for CASQ2:    About MalaCards
    catecholaminergic polymorphic ventricular tachycardia    ventricular tachycardia    ventricular tachycardia, catecholaminergic polymorphic, 2    gas gangrene
    hypertrophic cardiomyopathy    familial hypertrophic cardiomyopathy    cardiomyopathy    strabismus
    twinning    thyroiditis

    5 diseases from the University of Copenhagen DISEASES database for CASQ2:
    Malignant hyperthermia     Heart disease     Gas gangrene     Myopathy
    Hyperthyroidism

    6 Novoseek disease relationships for CASQ2 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ventricular tachycardia, catecholaminergic polymorphic 97.5 16 14571276 (2), 16908766 (2), 17607358 (1), 19121813 (1) (see all 12)
    tachycardia ventricular 75.8 5 12732448 (1), 17607358 (1), 11704930 (1), 15176429 (1)
    emotional stress 73.1 1 15709687 (1)
    death sudden 67.1 2 15709687 (1), 14715535 (1)
    ventricular arrhythmia 65.6 4 15709687 (1), 16932808 (1), 14715535 (1)
    arrhythmia 64.9 8 15709687 (1), 17607358 (1), 19121813 (1), 14715535 (1) (see all 6)

    GeneTests: CASQ2
    Catecholaminergic Polymorphic Ventricular Tachycardia

    Human Genome Epidemiology (HuGE) Navigator: CASQ2 (1 document)

    Export disorders for CASQ2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CASQ2 gene, integrated from 9 sources (see all 78):
    (articles sorted by number of sources associating them with CASQ2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Clinical phenotype and functional characterization of CASQ2 mutations associated with catecholaminergic polymorphic ventricular tachycardia. (PubMed id 16908766)1, 2, 9 di Barletta M.R.... Priori S.G. (2006)
    2. Molecular genetics of exercise-induced polymorphic ventricular tachycardia: identification of three novel cardiac ryanodine receptor mutations and two common calsequestrin 2 amino-acid polymorphisms. (PubMed id 14571276)1, 2, 9 Laitinen P.J.... Kontula K. (2003)
    3. A missense mutation in a highly conserved region of CASQ2 is associated with autosomal recessive catecholamine-induced polymorphic ventricular tachycardia in Bedouin families from Israel. (PubMed id 11704930)1, 2, 9 Lahat H....Eldar M. (2001)
    4. Chromosome mapping of five human cardiac and skeletal muscle sarcoplasmic reticulum protein genes. (PubMed id 8406504)1, 3, 9 Otsu K....MacLennan D.H. (1993)
    5. Phosphorylation of human calsequestrin: implications for calcium regulation. (PubMed id 21416293)1, 2 Sanchez E.J....Kang C. (2011)
    6. Catecholaminergic polymorphic ventricular tachycardia-related mutations R33Q and L167H alter calcium sensitivity of human cardiac calsequestrin. (PubMed id 18399795)1, 2 Valle G....Volpe P. (2008)
    7. Characterization of human cardiac calsequestrin and its deleterious mutants. (PubMed id 17881003)1, 2 Kim E....Kang C. (2007)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Calsequestrin mutant D307H exhibits depressed binding to its protein targets and a depressed response to calcium. (PubMed id 15485681)1, 2 Houle T.D.... Cala S.E. (2004)
    10. Calsequestrin 2 (CASQ2) mutations increase expression of calreticulin and ryanodine receptors, causing catecholaminergic polymorphic ventricular tachycardia. (PubMed id 17607358)1, 9 Song L....Seidman J.G. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    Aliases
    Disorders
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 845 HGNC: 1513 AceView: CASQ2 Ensembl:ENSG00000118729 euGenes: HUgn845
    ECgene: CASQ2 H-InvDB: CASQ2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CASQ2 Pharmacogenomics, SNPs, Pathways
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/CASQ2
    Wikipedia http://en.wikipedia.org/wiki/Calsequestrin

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CASQ2 gene:
    Search GeneIP for patents involving CASQ2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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