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Aliases for CASP1P2 Gene

Aliases for CASP1P2 Gene

  • Caspase 1 Pseudogene 2 2 3 5
  • Caspase 1, Apoptosis-Related Cysteine Peptidase Pseudogene 2 2 3
  • Caspase-1-Like 3

External Ids for CASP1P2 Gene

Previous GeneCards Identifiers for CASP1P2 Gene

  • GC11M104937

Summaries for CASP1P2 Gene

GeneCards Summary for CASP1P2 Gene

CASP1P2 (Caspase 1 Pseudogene 2) is a Pseudogene.

Additional gene information for CASP1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASP1P2 Gene

Genomics for CASP1P2 Gene

Regulatory Elements for CASP1P2 Gene

Enhancers for CASP1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H105032 1.4 FANTOM5 ENCODE dbSUPER 4.3 +37.2 37234 3 TBP TAF1 MAX CEBPG BATF RAD21 YY1 POLR2A IKZF2 JUNB CARD17 CASP4 CASP5 CARD16 CASP1P2 CASP1
GH11H105130 0.4 ENCODE 4.2 -59.1 -59138 0 RAD21 CARD17 CASP1P2 CARD18 CASP1P1
GH11H105164 0.4 FANTOM5 4.1 -92.9 -92873 0 CARD17 CASP5 CASP4 CASP1P2 CARD16 LOC105369469 GC11M105194
GH11H105070 0.2 ENCODE 5.3 +0.4 382 1 CARD17 CASP1P2 CASP1
GH11H105043 1.5 FANTOM5 ENCODE dbSUPER 0.3 +25.5 25523 4 FOXA2 ATF1 MLX ARID4B DMAP1 BRCA1 YY1 FOS SP5 ZHX2 CASP5 CARD17 CARD16 CASP1 CASP1P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CASP1P2 on UCSC Golden Path with GeneCards custom track

Promoters for CASP1P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000044300 456 201

Genomic Location for CASP1P2 Gene

Chromosome:
11
Start:
105,062,602 bp from pter
End:
105,071,556 bp from pter
Size:
8,955 bases
Orientation:
Minus strand

Genomic View for CASP1P2 Gene

Genes around CASP1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CASP1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CASP1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CASP1P2 Gene

Proteins for CASP1P2 Gene

Post-translational modifications for CASP1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASP1P2 Gene

Domains & Families for CASP1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASP1P2 Gene

Function for CASP1P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CASP1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CASP1P2 Gene

Localization for CASP1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CASP1P2 Gene

Pathways & Interactions for CASP1P2 Gene

SuperPathways for CASP1P2 Gene

No Data Available

Interacting Proteins for CASP1P2 Gene

Gene Ontology (GO) - Biological Process for CASP1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CASP1P2 Gene

Drugs & Compounds for CASP1P2 Gene

No Compound Related Data Available

Transcripts for CASP1P2 Gene

mRNA/cDNA for CASP1P2 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CASP1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CASP1P2 Gene

No ASD Table

Relevant External Links for CASP1P2 Gene

GeneLoc Exon Structure for
CASP1P2
ECgene alternative splicing isoforms for
CASP1P2

Expression for CASP1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CASP1P2 Gene

mRNA differential expression in normal tissues according to GTEx for CASP1P2 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x12.4), Esophagus - Mucosa (x10.4), Skin - Sun Exposed (Lower leg) (x7.0), and Vagina (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of CASP1P2 Gene:

CASP1P2
genes like me logo Genes that share expression patterns with CASP1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASP1P2 Gene

Orthologs for CASP1P2 Gene

Evolution for CASP1P2 Gene

ENSEMBL:
Gene Tree for CASP1P2 (if available)
TreeFam:
Gene Tree for CASP1P2 (if available)

No data available for Orthologs for CASP1P2 Gene

Paralogs for CASP1P2 Gene

No data available for Paralogs for CASP1P2 Gene

Variants for CASP1P2 Gene

Sequence variations from dbSNP and Humsavar for CASP1P2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000996351 -- 105,065,124(+) GGGGC(C/T)TATTG intron-variant
rs1001304293 -- 105,062,305(+) GAACT(G/T)TGGGA intron-variant, downstream-variant-500B
rs1001629366 -- 105,071,761(+) AGGGT(A/T)AGAGG intron-variant, upstream-variant-2KB
rs1001681158 -- 105,067,413(+) ACAGG(A/G)ATTTT intron-variant
rs1001795589 -- 105,067,095(+) GGTGA(A/G)CTACT intron-variant

Relevant External Links for CASP1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CASP1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CASP1P2 Gene

Disorders for CASP1P2 Gene

Relevant External Links for CASP1P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CASP1P2

No disorders were found for CASP1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CASP1P2 Gene

Publications for CASP1P2 Gene

  1. Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. (PMID: 19773279) Hosgood HD … Lan Q (Occupational and environmental medicine 2009) 3 60

Products for CASP1P2 Gene

Sources for CASP1P2 Gene

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