Aliases for CASP1P2 Gene
Aliases for CASP1P2 Gene
External Ids for CASP1P2 Gene
- HGNC: 43776
- Entrez Gene: 440067
- Ensembl: ENSG00000254750
Previous GeneCards Identifiers for CASP1P2 Gene
- GC11M104937
Summaries for CASP1P2 Gene
GeneCards Summary for CASP1P2 Gene
CASP1P2 (Caspase 1 Pseudogene 2) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASP1P2 Gene
Genomics for CASP1P2 Gene
Regulatory Elements for CASP1P2 Gene
Enhancers for CASP1P2 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH11G105032 | 1.4 | FANTOM5 ENCODE dbSUPER | 4.3 | +37.2 | 37234 | 3.7 | CTCF TBP TAF1 CEBPB JUNB MAX CEBPG RAD21 YY1 JUND | CARD17 CASP4 CASP5 CARD16 CASP1P2 CASP1 |
| GH11G105164 | 0.8 | FANTOM5 | 4.1 | -92.9 | -92873 | 0.5 | TAF1 MAX CEBPG RAD21 YY1 IKZF1 CEBPA HNF4A ZBTB33 | CARD17 CASP5 CASP4 CASP1P2 CARD16 LOC105369469 GC11M105194 |
| GH11G105130 | 0.6 | ENCODE | 4.2 | -59.1 | -59138 | 1.0 | CTCF IRF2 BHLHE40 TRIM22 RAD21 TARDBP EED ZNF143 IRF1 | CARD17 CASP1P2 CARD18 CASP1P1 |
| GH11G105070 | 0.4 | ENCODE | 5.3 | +0.4 | 382 | 1.6 | NFE2 | CARD17 CASP1P2 CASP1 |
| GH11G105043 | 1.5 | FANTOM5 ENCODE dbSUPER | 0.3 | +25.5 | 25523 | 4.6 | FOXA2 ATF1 MLX ARID4B DMAP1 BRCA1 YY1 GATA2 FOS SP5 | CASP5 CARD17 CARD16 CASP1 CASP1P2 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CASP1P2 on UCSC Golden Path with GeneCards custom track
Promoters for CASP1P2 Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|---|---|---|
| ENSR00000044300 | 456 | 201 |
Regulatory Element Products
Genomic Location for CASP1P2 Gene
- Chromosome:
- 11
- Start:
- 105,062,602 bp from pter
- End:
- 105,071,556 bp from pter
- Size:
- 8,955 bases
- Orientation:
- Minus strand
Genomic View for CASP1P2 Gene
Genes around CASP1P2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q22.3 by Ensembl
- 11q22.3 by Entrez Gene
- 11q22.3 by HGNC
CASP1P2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CASP1P2 Gene
Proteins for CASP1P2 Gene
Post-translational modifications for CASP1P2 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CASP1P2
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CASP1P2
- Origene Custom Protein Services for CASP1P2
- Search GeneTex for Proteins for CASP1P2
Assay Products
No data available for DME Specific Peptides for CASP1P2 Gene
Domains & Families for CASP1P2 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASP1P2 Gene
Function for CASP1P2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CASP1P2
-
- Search ViGene Biosciences for CASP1P2
CRISPR Products
- Browse CRISPR knockouts for CASP1P2
miRNA Products
- Search ViGene Biosciences for CASP1P2
Inhibitory RNA Products
- Search ViGene Biosciences for CASP1P2
Clone Products
- GenScript: Custom all cDNA clones Services for CASP1P2
- VectorBuilder custom plasmid, inducible vectors for CASP1P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CASP1P2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for CASP1P2
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CASP1P2 Gene
Localization for CASP1P2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CASP1P2 Gene
Transcripts for CASP1P2 Gene
mRNA/cDNA for CASP1P2 Gene
- (2) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CASP1P2
miRNA Products
- Search ViGene Biosciences for CASP1P2
Inhibitory RNA Products
- Search ViGene Biosciences for CASP1P2
Clone Products
- GenScript: Custom all cDNA clones Services for CASP1P2
- VectorBuilder custom plasmid, inducible vectors for CASP1P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CASP1P2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CASP1P2 Gene
mRNA differential expression in normal tissues according to GTEx for CASP1P2 Gene
This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x12.4), Esophagus - Mucosa (x10.4), Skin - Sun Exposed (Lower leg) (x7.0), and Vagina (x5.8).
NURSA nuclear receptor signaling pathways regulating expression of CASP1P2 Gene:
CASP1P2
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASP1P2 Gene
Orthologs for CASP1P2 Gene
No data available for Orthologs for CASP1P2 Gene
Paralogs for CASP1P2 Gene
No data available for Paralogs for CASP1P2 Gene
Variants for CASP1P2 Gene
| SNP ID | Clin | Chr 11 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000996351 | -- | 105,065,124(+) | GGGGC(C/T)TATTG | intron-variant | |
| rs1001304293 | -- | 105,062,305(+) | GAACT(G/T)TGGGA | intron-variant, downstream-variant-500B | |
| rs1001629366 | -- | 105,071,761(+) | AGGGT(A/T)AGAGG | intron-variant, upstream-variant-2KB | |
| rs1001681158 | -- | 105,067,413(+) | ACAGG(A/G)ATTTT | intron-variant | |
| rs1001795589 | -- | 105,067,095(+) | GGTGA(A/G)CTACT | intron-variant |
Relevant External Links for CASP1P2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CASP1P2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CASP1P2 Gene
Disorders for CASP1P2 Gene
Relevant External Links for CASP1P2
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- CASP1P2
No disorders were found for CASP1P2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CASP1P2 Gene
Publications for CASP1P2 Gene
- Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. (PMID: 19773279) Hosgood H.D. … Lan Q. (Occup Environ Med 2009) 3 64
Products for CASP1P2 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CASP1P2
- Origene Custom Protein Services for CASP1P2
- Browse OriGene Inhibitory RNA Products For CASP1P2
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CASP1P2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CASP1P2
- GenScript: Custom all cDNA clones Services for CASP1P2
- GenScript Custom Purified and Recombinant Proteins Services for CASP1P2
- GenScript Custom Assay Services for CASP1P2
- GenScript Custom overexpressing Cell Line Services for CASP1P2
- Browse GenScript CRISPR for CASP1P2
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CASP1P2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for CASP1P2
- VectorBuilder custom plasmid, inducible vectors for CASP1P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CASP1P2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CASP1P2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer