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Aliases for CASK-AS1 Gene

Subcategory (RNA class) for CASK-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CASK-AS1 Gene

  • CASK Antisense RNA 1 2 3 5
  • CASK Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CASK-AS1 Gene

Previous GeneCards Identifiers for CASK-AS1 Gene

  • GC00U933152
  • GC0XP041380

Summaries for CASK-AS1 Gene

GeneCards Summary for CASK-AS1 Gene

CASK-AS1 (CASK Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CASK-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASK-AS1 Gene

Genomics for CASK-AS1 Gene

Regulatory Elements for CASK-AS1 Gene

Enhancers for CASK-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH041083 1.9 FANTOM5 ENCODE dbSUPER 46.4 -433.5 -433513 6 MLX FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 NFYC MEF2D ZNF610 CASK-AS1 BCOR DDX3X USP9X MED14 CXorf38 LOC100132831 MPC1L IMPDH1P2 ENSG00000233103
GH0XH041329 1.8 FANTOM5 ENCODE dbSUPER 39.7 -186.6 -186563 7 FEZF1 DMAP1 YBX1 YY1 ZNF143 SP3 MEF2D SSRP1 ZNF610 ZNF585B DDX3X CASK-AS1 USP9X CXorf38 NYX MED14 PIR48586
GH0XH040570 1.5 FANTOM5 Ensembl ENCODE 13.1 -949.0 -949035 1 PKNOX1 ATF1 ZNF766 ELK1 ATF7 RUNX3 CAVIN1 JUNB ZNF592 MEF2D BCOR CASK-AS1 ATP6AP2 CXorf38 MED14 RNU7-164P
GH0XH041441 1.3 Ensembl ENCODE 13.9 -77.2 -77159 2 PKNOX1 MLX ARID4B DMAP1 ZNF2 YY1 ZNF766 ZNF143 SP3 SP5 DDX3X MED14 CASK-AS1 NYX PIR52979
GH0XH041025 1.3 Ensembl ENCODE dbSUPER 13.7 -492.6 -492633 4 TBP FOXA2 SREBF2 JUN MAX BRCA1 RAD21 ZNF664 HIC1 GTF3C2 MED14 CASK-AS1 BCOR DDX3X PIR36105 RPS2P55
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CASK-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CASK-AS1 Gene

Chromosome:
X
Start:
41,520,036 bp from pter
End:
41,522,336 bp from pter
Size:
2,301 bases
Orientation:
Plus strand

Genomic View for CASK-AS1 Gene

Genes around CASK-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CASK-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CASK-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CASK-AS1 Gene

Proteins for CASK-AS1 Gene

Post-translational modifications for CASK-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASK-AS1 Gene

Domains & Families for CASK-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASK-AS1 Gene

Function for CASK-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CASK-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CASK-AS1 Gene

Localization for CASK-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CASK-AS1 Gene

Pathways & Interactions for CASK-AS1 Gene

SuperPathways for CASK-AS1 Gene

No Data Available

Interacting Proteins for CASK-AS1 Gene

Gene Ontology (GO) - Biological Process for CASK-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CASK-AS1 Gene

Drugs & Compounds for CASK-AS1 Gene

No Compound Related Data Available

Transcripts for CASK-AS1 Gene

mRNA/cDNA for CASK-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CASK-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CASK-AS1 Gene

No ASD Table

Relevant External Links for CASK-AS1 Gene

GeneLoc Exon Structure for
CASK-AS1
ECgene alternative splicing isoforms for
CASK-AS1

Expression for CASK-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CASK-AS1 Gene

genes like me logo Genes that share expression patterns with CASK-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CASK-AS1 Gene

Orthologs for CASK-AS1 Gene

Evolution for CASK-AS1 Gene

ENSEMBL:
Gene Tree for CASK-AS1 (if available)
TreeFam:
Gene Tree for CASK-AS1 (if available)

No data available for Orthologs for CASK-AS1 Gene

Paralogs for CASK-AS1 Gene

No data available for Paralogs for CASK-AS1 Gene

Variants for CASK-AS1 Gene

Relevant External Links for CASK-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CASK-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CASK-AS1 Gene

Disorders for CASK-AS1 Gene

No disorders were found for CASK-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CASK-AS1 Gene

Publications for CASK-AS1 Gene

No publications were found for CASK-AS1 Gene.

Products for CASK-AS1 Gene

Sources for CASK-AS1 Gene

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