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CASK Gene

protein-coding   GIFtS: 63

GC0XM041259
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
(Previous name: trinucleotide repeat containing 8 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: TNRC8)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
CAGH39 1, 2
CMG 2, 5
EC 2.7.11.1 3
FGS4 2, 5
FLJ22219 2
FLJ31914 2
LIN2 1, 2, 3
MICPCH 2, 5
TNRC8 2
hCASK 3
Descriptions
CAMGUK protein 2
Calcium/calmodulin-dependent serine protein kinase 2, 3
Lin-2 homolog 3
calcium/calmodulin-dependent serine protein kinase (MAGUK
family) 2
calcium/calmodulin-dependent serine protein kinase
membrane-associated guanylate kinase 2
trinucleotide repeat containing 8 1, 2
External Ids
HGNC: 14971
Entrez Gene: 85732
UniProtKB: O149363
Ensembl: ENSG000001470447
Search outside databases for aliases for CASK gene

Previous GC identifers: GC0XM039406 GC0XM039627 GC0XM040223 GC0XM040409 GC0XM041134

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for CASK:
The CASK gene encodes a calcium/calmodulin-dependent serine protein kinase that is a member of the
membrane-associated guanylate kinase (MAGUK) protein family. MAGUKs are scaffolding proteins
associated with intercellular junctions (Atasoy et al., 2007 [PubMed 17287346]).[supplied by OMIM]

UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936
Function: Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring
and ion channel trafficking. Contributes to neural development and regulation of gene expression
via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including
amyloid precursor protein, neurexins and syndecans. May mediate a link between the extracellular
matrix and the actin cytoskeleton via its interaction with syndecan and with the
actin/spectrin-binding protein 4.1

Gene Wiki entry for CASK

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the CASK gene  

Entrez Gene cytogenetic band: Xp11.4   Ensembl cytogenetic band:  Xp11.4   HGNC cytogenetic band: Xp11.4

CASK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM041259:     (about GC identifiers)

Start:
41,263,408 bp from pter
End:
41,667,660 bp from pter
Size:
404,253 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000023.9  NT_079573.3  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 (See protein sequence)
Recommended Name: Peripheral plasma membrane protein CASK  
Size: 926 amino acids; 105123 Da
Cofactor: Unlike other protein kinases, does not require a divalent cation such as magnesium for
catalytic activity
Subunit: Binds WHRN and NRXN1 cytosolic tail. Interacts with CASKIN1, APBA1, LIN7(A/B/C) and L27
domain of DLG1 and isoform 2 of DLG4 (By similarity). CASK and LIN7 form two mutually exclusive
tripartite complexes with APBA1 or CASKIN1 (By similarity). Interacts with FCHSD2. Interacts with
TSPYL2. Part of a complex containing CASK, TRB1 and TSPYL2 (By similarity). Interacts with KIRREL3
Subcellular location: Nucleus (By similarity). Cytoplasm (By similarity). Cell membrane; Peripheral
membrane protein (By similarity)
PDB structures from and Proteopedia :
1KGD (3D)    1KWA (3D)    1ZL8 (3D)    3C0G (3D)    3C0H (3D)    3C0I (3D)    
Secondary accessions: A6NES1 O43215 Q17RI4 Q59HA0 Q5VT16 Q5VT17 Q5VT18 Q5VT19 Q66T42 Q9BYH6 Q9NYB2
Q9NYB3
Alternative splicing: 6 isoforms:  O14936-1   O14936-2   O14936-3   O14936-4   O14936-5   O14936-6   

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (3 alternative transcripts): 
    NP_001119526.1  NP_001119527.1  NP_003679.2  


    ENSEMBL proteins: 
    ENSP00000367408 ENSP00000367396 ENSP00000354641 ENSP00000367410 ENSP00000367400 ENSP00000367405 
    ENSP00000322727 ENSP00000367421 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (CASK)
    Browse Abnova for Human Recombinant Proteins
                  OriGene Purified Recombinant Human Protein: CASK 

    4 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634 nucleus IEA--
    GO:0005737 cytoplasm IEA--
    GO:0005886 plasma membrane TAS9660868
    GO:0015629 actin cytoskeleton TAS9660868
    About this table

    Antibodies for CASK: 
    Invitrogen Antibodies for CASK
    Millipore Mono- and Polyclonal Antibodies for the study of CASK
    Sigma-Aldrich Antibody Arrays and Antibodies for CASK
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for CASK 
    Antibodies from Abcam (CASK), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (CASK)
    Novus Biologicals Antibody for CASK

    Assays for CASK: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/12 InterPro domains/families (see all 12 ):
     IPR017441 Protein_kinase_ATP_BS
     IPR008144 Guanylate_kin
     IPR002290 Ser_thr_pkinase
     IPR008145 Guanylt/Ca
     IPR008271 Ser_thr_pkin_AS


       GeneDecks  CASK for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry O14936

    ProtoNet protein and cluster: O14936

    5 Blocks protein families:
    IPB001452 SH3 domain signature
    IPB001478 PDZ/DHR/GLGF domain
    IPB004172 L27 domain
    IPB008144 Guanylate kinase
    IPB011511 Variant SH3


    UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936
    Domain: The first L27 domain binds DLG1 and the second L27 domain probably binds LIN7 (By
    similarity)
    Domain: The protein kinase domain mediates the interaction with FCHSD2
    Similarity: In the N-terminal section; belongs to the protein kinase superfamily. CAMK Ser/Thr
    protein kinase family. CaMK subfamily
    Similarity: Belongs to the MAGUK family
    Similarity: Contains 1 guanylate kinase-like domain
    Similarity: Contains 2 L27 domains
    Similarity: Contains 1 PDZ (DHR) domain
    Similarity: Contains 1 protein kinase domain
    Similarity: Contains 1 SH3 domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CASK)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (CASK)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001126054

                  Applied Biosystems Silencer® siRNAs for CASK

                  Sigma-Aldrich siRNA and siRNA Panels for CASK  
                         Sigma-Aldrich shRNA Panels and shRNA for CASK  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001126054
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001126054
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001126054 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_003688

    UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936
    Function: Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring
    and ion channel trafficking. Contributes to neural development and regulation of gene expression
    via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including
    amyloid precursor protein, neurexins and syndecans. May mediate a link between the extracellular
    matrix and the actin cytoskeleton via its interaction with syndecan and with the
    actin/spectrin-binding protein 4.1
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Differs from archetypal CaMK members in that the kinase domain exhibits a
    constitutively active conformation and the autoinhibitory region does not engage in direct contact
    with the ATP-binding cleft, although it still binds Ca(2+)/CAM
    Biophysicochemical properties: Kinetic parameters: KM=563 uM for ATP; Note=Kinetics of
    autophosphorylation assay were measured, rather than phosphorylation of an exogenous substrate;
    Enzyme Number (IUBMB): EC 2.7.11.1 

    Genatlas biochemistry entry for CASK:
    membrane associated guanylate kinase,Drosophila CAMGUK homolog,expressed in synaptic membranes of
    the central nervous system

    6 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Cask):

    craniofacialdigestive/alimentarygrowth/sizelethality-prenatal/perinatalnervous system
    respiratory system

    5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0004385 guanylate kinase activity TAS9660868
    GO:0004674 protein serine/threonine kinase activity IEA--
    GO:0005516 calmodulin binding IEA--
    GO:0005524 ATP binding IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    1 Invitrogen iPath™ Online BioAtlas - Pathway for CASK (Maps provided by GeneGo):
     Putative ubiquitin pathway

       GeneDecks  CASK for the pathways selected above  
    About GeneDecksing

    1 Millipore Pathway for CASK
     Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway

       GeneDecks  CASK for the pathways selected above  
    About GeneDecksing

    2 Sigma-Aldrich "Your Favorite Gene" Pathways for  CASK  (Your Favorite Gene powered by Ingenuity) 
     Tight Junction Signaling
     Purine Metabolism

       GeneDecks  CASK for the pathways selected above  
    About GeneDecksing

    1 Kegg Pathway  (Kegg details for CASK):
     hsa04530 Tight junction

       GeneDecks  CASK for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  CASK 


    5/53 Interacting proteins for CASK (ENSP000003674053 O149361, 2) via UniProtKB, MINT, and/or STRING (see all 53 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ID1P411341STRING (score=.724) EBI-1215506, EBI-1215527
    EPS8Q129292STRING (score=.778) MINT-2730173 MINT-2730155 MINT-2825320
    LIN7AO149102STRING (score=.988) MINT-2730201 MINT-2730090
    CNTNAP4Q9C0A02STRING (score=.879) MINT-58197
    SDC1P188272STRING (score=.989) MINT-58222
    About this table

    2 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468 protein amino acid phosphorylation IEA--
    GO:0007155 cell adhesion TAS9660868
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for CASK
    3 Novoseek chemical compound relationships for CASK gene
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    guanylate 77.45 15 11120739 (1), 12641734 (1), 19125693 (1), 9178262 (1) (see all 9)
    calcium 41.87 21 11120739 (2), 19125693 (2), 18019060 (2), 18606847 (1) (see all 12)
    tyrosine 4.47 1 16602692 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CASK)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (CASK)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001126054

                  Sigma-Aldrich siRNA and siRNA Panels for CASK  
                         Sigma-Aldrich shRNA Panels and shRNA for CASK  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001126054  NM_001126055  NM_003688  

    REFSEQ mRNAs for CASK gene (3 alternative transcripts): 

    NM_001126054.2   NM_001126055.2   NM_003688.3   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001126054  NM_001126055  NM_003688  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001126054
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001126054
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001126054 

    Additional cDNA sequence: 

    AB039327.2 AB208859.1 AF032119.1 AF035582.1 AF262404.1 AF262405.1 AK025872.1 AK056476.1 
    AK313399.1 AY705392.1 BC029936.1 BC035990.1 BC117311.1 BC143454.1 BC143456.1 CR611825.1 

    15 DOTS entries:

    DT.214767  DT.217027  DT.100820409  DT.91902635  DT.92434324  DT.121285410  DT.40111714  DT.121285489 
    DT.100828322  DT.70100249  DT.121285394  DT.75120166  DT.92434325  DT.92434327  DT.95227912 

    24/124 AceView cDNA sequences (see all 124 ):

    AV707947 AI678523 BQ775180 CB240993 CA312343 BF063482 BC035990 BG697584 
    AA586558 BF434865 CB157686 AI493971 AF262404 AU137291 BX099511 H88880 
    BX477825 AW851147 H88879 R98625 AI016718 AW593454 BF725583 W68164 

    highest scoring ESTs for CASK:

    AF032119 AF035582 AI379027 AW027103 AW028245 AW977534 N92643 AA016057 AA016113 AA045964 

    Unigene Cluster for CASK:

    Calcium/calmodulin-dependent serine protein kinase (MAGUK family)
    Hs.495984  [show with all ESTs]
    Unigene Representative Sequence: NM_003688


    GeneLoc Exon Structure

    8 Ensembl transcripts including schematic representations:
    ENST00000378166  ENST00000378154  ENST00000361962  ENST00000378168  ENST00000378158  ENST00000378163  
    ENST00000318588  ENST00000378179  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    CASK expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for CASK

    1 / 2 / 3

    12 probe-sets matching CASK gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    36414_s_at2, 3 U95-A 1 1.00 1.00 0.79 0.88 AF032119 1.00 0.85 0.93 1
    61707_at2, 3 U95-C 1 1.00 1.00 0.84 1.18 AI346040 0.20 0.17 0.18 2
    88441_g_at2, 3 U95-D 1 1.00 1.00 0.69 0.91 AI659225 0.60 1.00 0.82 1
    31854_at2, 3 U95-A 1 1.00 1.00 0.79 1.07 AF035582 1.00 0.85 0.93 1

    238699_s_at2, 3 U133-B 1 1.00 1.00 -- -- AI659225 0.60 1.00 0.82 1

    207620_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_003688 0.60 1.00 0.82 1

    211208_s_at2, 3 U133-A 1 1.00 1.00 -- -- AB039327 0.60 0.75 0.68 1

    227156_at2 U133-B 1 1.00 1.00 -- -- -- -- -- -- --

    238699_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    207620_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    211208_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    227156_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    GeneDecks  CASK for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TAGTGAAATG

    SOURCE GeneReport for Unigene cluster: Hs.495984

    Expression variation in blood from EXPOLDB for CASK

    UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936
    Tissue specificity: Ubiquitous. Expression is significantly greater in brain relative to kidney,
    lung, and liver and in fetal brain and kidney relative to lung and liver

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for CASK gene from 5/13 species (see all 13 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    CASK1   -- calcium/calmodulin-dependent serine protein kinase more 95.22(n)
    99.57(a)
    480887  XM_845525.1  XP_850618.1 
    cow
    (Bos taurus)
    CASK1   -- calcium/calmodulin-dependent serine protein kinase more 95.58(n)
    99.57(a)
    404149  XM_001249492.1  XP_001249493.1 
    rat
    (Rattus norvegicus)
    Cask1   -- calcium/calmodulin-dependent serine protein kinase more 94.57(n)
    99.23(a)
    29647  NM_022184.1  NP_071520.1 
    mouse
    (Mus musculus)
    Cask1, 5 X (4.20 cM)5
    calcium/calmodulin-dependent serine protein kinase more1, 5 94.96(n)1
    99.55(a)1
    123611  NM_009806.21  NP_033936.21 
     AK0294105  AK1365235  (see all 17)
    chicken
    (Gallus gallus)
    CASK1   -- calcium/calmodulin-dependent serine protein kinase more 88.7(n)
    98.79(a)
    418565  XM_416769.2  XP_416769.2 
    About this table        Species with no ortholog for CASK

    ENSEMBL Gene Tree for CASK
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for CASK gene
    MPP12  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/955 NCBI SNPs in CASK are shown (see all 955 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 308)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr X posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs32036421,2
    A,C,F,H,O41259341(-) CGGAAC/TAACCA 3 -- ut3113Minor allele frequency- T:0.06MN EU EA WA 1022
    rs8652051,2
    A,C,F,H,O41668536(+) ACTAGA/CGACCA 1 -- ng314Minor allele frequency- C:0.07EU EA WA 418
    rs59174321,2
    A,C,F,H41260945(+) TCTTTT/CCAAAG 3 -- ut31 ese3 trp34Minor allele frequency- C:0.08EU EA WA 416
    rs59181921,2
    A,C,F,H41259467(+) TCAGCT/CCCTGG 3 -- ut31 ese34Minor allele frequency- C:0.05EU EA WA 418
    rs8645701,2
    A,C,F,H41668668(+) GAACAG/AAATGC 1 -- ng3111Minor allele frequency- A:0.08NA EA EU WA 878
    rs59181931,2
    A,C,F,H41260073(+) AGTAGC/TAGCTA 3 -- ut31 ese34Minor allele frequency- T:0.07EU EA WA 418
    rs12130851,2
    C,F41667937(+) CAACCC/GGTCGG 1 -- ng311Minor allele frequency- G:0.15MN 184
    rs128421951,2
    C,H41286888(+) CCTACC/ATGCAT 3 Y/D L/V mis14Minor allele frequency- A:0.00EU EA WA 418
    rs173158001,2
    F,H41331149(+) GCGTCG/ATTATT 3 N/N syn1 ese37Minor allele frequency- A:0.00NA EU EA WA 562
    --
    rs414312451,2
    F41483647(-) CATTAT/CATGAG 3 Y/Y syn14Minor allele frequency- C:0.01EU EA WA 208
    About this table

    HapMap Linkage Disequilibrium images for CASK (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 300172   disorders: 300749  300422  

    UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936

  • Defects in CASK are the cause of mental retardation and microcephaly with pontine and
    cerebellar hypoplasia (MICPCH) [MIM:300749]. MICPCH is characterized by severe mental retardation,
    microcephaly and disproportionate pontine and cerebellar hypoplasia
  • Human Gene Mutation Database: CASK

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/80 PubMed articles for CASK gene (see all 80 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 8573 HGNC: 1497 AceView: CASK Ensembl:ENSG00000147044 euGenes: HUgn8573
    ECgene: CASK H-InvDB: CASK
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for CASK:
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      Free SNP selection tool



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     Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
     Antibodies for CASK

    GeneCards Homepage    -    Last full update: 1 Jul 2009        Incremental update: 13 Oct 2009

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