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Aliases & Descriptions for CASK
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases CAGH39 1 , 2 CMG 2 , 5 EC 2.7.11.1 3 FGS4 2 , 5 FLJ22219 2 FLJ31914 2 LIN2 1 , 2 , 3 MICPCH 2 , 5 TNRC8 2 hCASK 3
Descriptions CAMGUK protein 2 Calcium/calmodulin-dependent serine protein kinase 2 , 3 Lin-2 homolog 3 calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 calcium/calmodulin-dependent serine protein kinase membrane-associated guanylate kinase 2 trinucleotide repeat containing 8 1 , 2
Search outside databases for aliases for CASK genePrevious GC identifers: GC0XM039406 GC0XM039627 GC0XM040223 GC0XM040409 GC0XM041134
Summaries for CASK (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for CASK : The CASK gene encodes a calcium/calmodulin-dependent serine protein kinase that is a member of themembrane-associated guanylate kinase (MAGUK) protein family. MAGUKs are scaffolding proteinsassociated with intercellular junctions (Atasoy et al., 2007 [PubMed 17287346]).[supplied by OMIM] UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 Function : Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoringand ion channel trafficking. Contributes to neural development and regulation of gene expressionvia interaction with the transcription factor TRB1. Binds to cell-surface proteins, includingamyloid precursor protein, neurexins and syndecans. May mediate a link between the extracellularmatrix and the actin cytoskeleton via its interaction with syndecan and with theactin/spectrin-binding protein 4.1
Gene Wiki entry for CASK
Genomic Location for CASK
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the CASK gene Entrez Gene cytogenetic band: Xp11.4 Ensembl cytogenetic band: Xp11.4 HGNC cytogenetic band: Xp11.4 CASK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XM041259:
(about GC identifiers )
Start:
41,263,408 bp from pter
End:
41,667,660 bp from pter
Size:
404,253 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000023.9 NT_079573.3 Proteins for CASK
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 (See
protein sequence )Recommended Name: Peripheral plasma membrane protein CASK Size : 926 amino acids; 105123 Da
Cofactor : Unlike other protein kinases, does not require a divalent cation such as magnesium forcatalytic activity
Subunit : Binds WHRN and NRXN1 cytosolic tail. Interacts with CASKIN1, APBA1, LIN7(A/B/C) and L27domain of DLG1 and isoform 2 of DLG4 (By similarity). CASK and LIN7 form two mutually exclusivetripartite complexes with APBA1 or CASKIN1 (By similarity). Interacts with FCHSD2. Interacts withTSPYL2. Part of a complex containing CASK, TRB1 and TSPYL2 (By similarity). Interacts with KIRREL3
Subcellular location : Nucleus (By similarity). Cytoplasm (By similarity). Cell membrane; Peripheralmembrane protein (By similarity)
PDB structures from and Proteopedia : 1KGD (3D)
 1KWA (3D)
 1ZL8 (3D)
 3C0G (3D)
 3C0H (3D)
 3C0I (3D)
 
Secondary accessions : A6NES1 O43215 Q17RI4 Q59HA0 Q5VT16 Q5VT17 Q5VT18 Q5VT19 Q66T42 Q9BYH6 Q9NYB2Q9NYB3 Alternative splicing : 6 isoforms : O14936-1 O14936-2 O14936-3 O14936-4 O14936-5 O14936-6
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001119526.1 NP_001119527.1 NP_003679.2 ENSEMBL proteins: ENSP00000367408 ENSP00000367396 ENSP00000354641 ENSP00000367410 ENSP00000367400 ENSP00000367405 ENSP00000322727 ENSP00000367421 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: CASK 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for CASK: Assays for CASK:
Protein
Domains/ Families for CASK(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O14936 ProtoNet protein and cluster: O14936
5 Blocks protein families : IPB001452 SH3 domain signature IPB001478 PDZ/DHR/GLGF domain IPB004172 L27 domain IPB008144 Guanylate kinase IPB011511 Variant SH3 UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 Domain : The first L27 domain binds DLG1 and the second L27 domain probably binds LIN7 (Bysimilarity) Domain : The protein kinase domain mediates the interaction with FCHSD2Similarity : In the N-terminal section; belongs to the protein kinase superfamily. CAMK Ser/Thrprotein kinase family. CaMK subfamily Similarity : Belongs to the MAGUK familySimilarity : Contains 1 guanylate kinase-like domainSimilarity : Contains 2 L27 domainsSimilarity : Contains 1 PDZ (DHR) domainSimilarity : Contains 1 protein kinase domainSimilarity : Contains 1 SH3 domain
Gene Function for CASK
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001126054 Applied Biosystems Silencer ® siRNAs for CASK Sigma-Aldrich siRNA and siRNA Panels for CASK Sigma-Aldrich shRNA Panels and shRNA for CASK Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003688 UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 Function : Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoringand ion channel trafficking. Contributes to neural development and regulation of gene expressionvia interaction with the transcription factor TRB1. Binds to cell-surface proteins, includingamyloid precursor protein, neurexins and syndecans. May mediate a link between the extracellularmatrix and the actin cytoskeleton via its interaction with syndecan and with theactin/spectrin-binding protein 4.1 Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Differs from archetypal CaMK members in that the kinase domain exhibits aconstitutively active conformation and the autoinhibitory region does not engage in direct contactwith the ATP-binding cleft, although it still binds Ca(2+)/CAM Biophysicochemical properties : Kinetic parameters: KM=563 uM for ATP; Note=Kinetics ofautophosphorylation assay were measured, rather than phosphorylation of an exogenous substrate; Enzyme Number (IUBMB): EC 2.7.11.1
Genatlas biochemistry entry for CASK :membrane associated guanylate kinase,Drosophila CAMGUK homolog,expressed in synaptic membranes ofthe central nervous system
6 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Cask) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
About this table
Pathways & Interactions for CASK
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for CASK (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for CASK 5/53 Interacting proteins for CASK (ENSP00000367405 3 O14936 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 53
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for CASK (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for CASK 3 Novoseek chemical compound relationships for CASK gene
About this table
Transcripts for CASK(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001126054 Sigma-Aldrich siRNA and siRNA Panels for CASK Sigma-Aldrich shRNA Panels and shRNA for CASK Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001126054 NM_001126055 NM_003688
REFSEQ mRNAs for CASK gene (3 alternative transcripts): NM_001126054.2 NM_001126055.2 NM_003688.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001126054 NM_001126055 NM_003688
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001126054  
Additional cDNA sequence: AB039327.2 AB208859.1 AF032119.1 AF035582.1 AF262404.1 AF262405.1 AK025872.1 AK056476.1 AK313399.1 AY705392.1 BC029936.1 BC035990.1 BC117311.1 BC143454.1 BC143456.1 CR611825.1
15 DOTS entries : DT.214767 DT.217027 DT.100820409 DT.91902635 DT.92434324 DT.121285410 DT.40111714 DT.121285489 DT.100828322 DT.70100249 DT.121285394 DT.75120166 DT.92434325 DT.92434327 DT.95227912
24/124 AceView cDNA sequences (see all 124
):AV707947 AI678523 BQ775180 CB240993 CA312343 BF063482 BC035990 BG697584 AA586558 BF434865 CB157686 AI493971 AF262404 AU137291 BX099511 H88880 BX477825 AW851147 H88879 R98625 AI016718 AW593454 BF725583 W68164
highest scoring ESTs for CASK :AF032119 AF035582 AI379027 AW027103 AW028245 AW977534 N92643 AA016057 AA016113 AA045964
Unigene Cluster for CASK: Calcium/calmodulin-dependent serine protein kinase (MAGUK family) Hs.495984 [show with all ESTs ] Unigene Representative Sequence: NM_003688 GeneLoc Exon Structure 8 Ensembl transcripts including schematic representations : ENST00000378166
ENST00000378154
ENST00000361962
ENST00000378168
ENST00000378158
ENST00000378163
ENST00000318588
ENST00000378179
Expression for CASK
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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CASK expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for CASK 1 / 2 / 3
12 probe-sets matching CASK gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAGTGAAATGSOURCE GeneReport for Unigene cluster: Hs.495984 Expression variation in blood from EXPOLDB for CASK
UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936 Tissue specificity : Ubiquitous. Expression is significantly greater in brain relative to kidney,lung, and liver and in fetal brain and kidney relative to lung and liver
Orthologs for CASK
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for CASK gene from 5/13 species (see all 13
)
About this table Species with no ortholog for CASK ENSEMBL Gene Tree for CASK Paralogs for CASK (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for CASK gene MPP1 2
SNPs/Variants for CASK (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for CASK (up to first 250kb)
Disorders & Mutations for CASK
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 300172 disorders : 300749 300422 UniProtKB/Swiss-Prot: CSKP_HUMAN, O14936
Defects in CASK are the cause of mental retardation and microcephaly with pontine andcerebellar hypoplasia (MICPCH) [MIM:300749]. MICPCH is characterized by severe mental retardation,microcephaly and disproportionate pontine and cerebellar hypoplasia
Human Gene Mutation Database : CASK
Medical News for CASK (Possibly Related Articles in
Doctor's Guide )
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--
Publications for CASK (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/80 PubMed articles for CASK gene (see all 80
): Human CASK/LIN-2 binds syndecan-2 and protein 4.1 and localizes to the basolateral membrane of epithelial cells. (PubMed id 9660868) 1, 3, 4 Cohen A.R....Anderson J.M. (1998) CASK Functions as a Mg2+-independent neurexin kinase. (PubMed id 18423203) 3, 4 Mukherjee K....Wahl M.C. (2008) Mutations of CASK cause an X-linked brain malformation phenotype with microcephaly and hypoplasia of the brainstem and cerebellum. (PubMed id 19165920) 3, 4 Najm J....Kutsche K. (2008) Mapping and expression analysis of the human CASK gene. (PubMed id 11003712) 3, 4 Stevenson D.... Wilson J.B. (2000) The location of human CASK at Xp11.4 identifies this gene as a candidate for X-linked optic atrophy. (PubMed id 9722958) 2, 3 Dimitratos S.D....Bryant P.J. (1998) Crystal structure of the hCASK PDZ domain reveals the structural basis of class II PDZ domain target recognition. (PubMed id 9546224) 3, 4 Daniels D.L.... Bruenger A.T. (1998) Human calcium/calmodulin-dependent serine protein kinase regulates the expression of p21 via the E2A transcription factor. (PubMed id 19125693) 1, 3 Sun R....Xia Z. (2009) The MAGUK-family protein CASK is targeted to nuclei of the basal epidermis and controls keratinocyte proliferation. (PubMed id 18664494) 1, 3 Ojeh N....Maatta A. (2008) Association of junctional adhesion molecule with calcium/calmodulin-dependent serine protein kinase (CASK/LIN-2) in human epithelial caco-2 cells. (PubMed id 11120739) 1, 3 Martinez-Estrada O.M....Bazzoni G. (2001) hCASK and hDlg associate in epithelia, and their src homology 3 and guanylate kinase domains participate in both intramolecular and intermolecular interactions. (PubMed id 10993877) 1, 3 Nix S.L....Walther Z. (2000)
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Genome Databases showing CASK
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing CASK
(According to HUGE )
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Specialized Databases showing CASK (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for CASK (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Recombinant Proteins (CASK ) Antibodies (CASK )
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009