Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CASC8 Gene

Subcategory (RNA class) for CASC8 Gene


Quality Score for this RNA gene is


Aliases for CASC8 Gene

  • Cancer Susceptibility Candidate 8 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 860 2 3
  • LINC00860 3
  • CARLo-1 3

External Ids for CASC8 Gene

Previous GeneCards Identifiers for CASC8 Gene

  • GC08M128304

Summaries for CASC8 Gene

GeneCards Summary for CASC8 Gene

CASC8 (Cancer Susceptibility Candidate 8 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASC8 Gene

Genomics for CASC8 Gene

Genomic Location for CASC8 Gene

127,289,817 bp from pter
127,482,139 bp from pter
192,323 bases
Minus strand

Genomic View for CASC8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CASC8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CASC8 Gene

No data available for Regulatory Elements for CASC8 Gene

Proteins for CASC8 Gene

Post-translational modifications for CASC8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASC8 Gene

Domains for CASC8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASC8 Gene

Function for CASC8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CASC8 Gene

Localization for CASC8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CASC8 Gene

Pathways for CASC8 Gene

SuperPathways for CASC8 Gene

No Data Available

Interacting Proteins for CASC8 Gene

Gene Ontology (GO) - Biological Process for CASC8 Gene


No data available for Pathways by source for CASC8 Gene

Transcripts for CASC8 Gene

mRNA/cDNA for CASC8 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CASC8

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CASC8 Gene

No ASD Table

Relevant External Links for CASC8 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CASC8 Gene

mRNA expression in normal human tissues for CASC8 Gene

mRNA differential expression in normal tissues according to GTEx for CASC8 Gene

This gene is overexpressed in Minor Salivary Gland (7.6), Colon - Transverse (5.0), and Esophagus - Mucosa (4.1).
genes like me logo Genes that share expressions with CASC8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CASC8 Gene

Orthologs for CASC8 Gene

Evolution for CASC8 Gene

Gene Tree for CASC8 (if available)
Gene Tree for CASC8 (if available)

No data available for Orthologs for CASC8 Gene

Paralogs for CASC8 Gene

No data available for Paralogs for CASC8 Gene

Variants for CASC8 Gene

Sequence variations from dbSNP and Humsavar for CASC8 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs921146 -- 127,462,940(-) TACAT(A/C)TCACT intron-variant
rs1074411 -- 127,437,976(-) AATTC(C/T)TCTAG intron-variant
rs1113972 -- 127,438,168(-) aggat(C/T)ttctc intron-variant
rs1447292 -- 127,460,397(-) CTGAG(A/G)TTTGG intron-variant
rs1447293 -- 127,460,075(-) AGAAT(A/G)AGATT intron-variant

Relevant External Links for CASC8 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CASC8 Gene

Disorders for CASC8 Gene

No disorders were found for CASC8 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CASC8 Gene

Publications for CASC8 Gene

  1. Long-range interaction and correlation between MYC enhancer and oncogenic long noncoding RNA CARLo-5. (PMID: 24594601) Kim T. … Croce C.M. (Proc. Natl. Acad. Sci. U.S.A. 2014) 2 3
  2. Genetic variation in prostate-specific antigen-detected prostate cancer and the effect of control selection on genetic association studies. (PMID: 24753544) Knipe D.W. … Martin R.M. (Cancer Epidemiol. Biomarkers Prev. 2014) 3
  3. Genetic variant in 8q24 is associated with prognosis for gastric cancer in a Chinese population. (PMID: 25302443) Ma G. … Chen J. (J. Gastroenterol. Hepatol. 2015) 3
  4. A common variant associated with prostate cancer in European and African populations. (PMID: 16682969) Amundadottir L.T. … Stefansson K. (Nat. Genet. 2006) 3
  5. Genome-wide association study of prostate cancer identifies a second risk locus at 8q24. (PMID: 17401363) Yeager M. … Thomas G. (Nat. Genet. 2007) 3

Products for CASC8 Gene

Sources for CASC8 Gene

Back to Top