Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CASC11 Gene

Subcategory (RNA class) for CASC11 Gene


Quality Score for this RNA gene is


Aliases for CASC11 Gene

  • Cancer Susceptibility Candidate 11 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 990 2 3
  • TCONS_00014535 3
  • LINC00990 3
  • CARLo-7 3

External Ids for CASC11 Gene

ORGUL Members for CASC11 Gene

Previous GeneCards Identifiers for CASC11 Gene

  • GC08M128699

Summaries for CASC11 Gene

GeneCards Summary for CASC11 Gene

CASC11 (Cancer Susceptibility Candidate 11 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CASC11 Gene

Genomics for CASC11 Gene

Genomic Location for CASC11 Gene

127,686,343 bp from pter
127,735,767 bp from pter
49,425 bases
Minus strand

Genomic View for CASC11 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CASC11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CASC11 Gene

No data available for Regulatory Elements for CASC11 Gene

Proteins for CASC11 Gene

Post-translational modifications for CASC11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CASC11 Gene

Domains for CASC11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CASC11 Gene

Function for CASC11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CASC11 Gene

Localization for CASC11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CASC11 Gene

Pathways for CASC11 Gene

SuperPathways for CASC11 Gene

No Data Available

Interacting Proteins for CASC11 Gene

Gene Ontology (GO) - Biological Process for CASC11 Gene


No data available for Pathways by source for CASC11 Gene

Transcripts for CASC11 Gene

mRNA/cDNA for CASC11 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CASC11 Gene

No ASD Table

Relevant External Links for CASC11 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CASC11 Gene

mRNA expression in normal human tissues for CASC11 Gene

genes like me logo Genes that share expressions with CASC11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CASC11 Gene

Orthologs for CASC11 Gene

Evolution for CASC11 Gene

Gene Tree for CASC11 (if available)
Gene Tree for CASC11 (if available)

No data available for Orthologs for CASC11 Gene

Paralogs for CASC11 Gene

No data available for Paralogs for CASC11 Gene

Variants for CASC11 Gene

Sequence variations from dbSNP and Humsavar for CASC11 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs4132423 -- 127,723,256(-) TCAGC(A/T)TCTTA intron-variant
rs4132424 -- 127,723,254(-) CAGCT(C/T)CTTAA intron-variant
rs4256559 -- 127,709,266(+) CCTTA(G/T)TATAG intron-variant
rs4298463 -- 127,720,421(+) atcac(C/T)tgagg intron-variant
rs4371970 -- 127,704,761(+) CTTTT(C/T)TTCTA intron-variant

Relevant External Links for CASC11 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CASC11 Gene

Disorders for CASC11 Gene

No disorders were found for CASC11 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CASC11 Gene

Publications for CASC11 Gene

  1. Long-range interaction and correlation between MYC enhancer and oncogenic long noncoding RNA CARLo-5. (PMID: 24594601) Kim T. … Croce C.M. (Proc. Natl. Acad. Sci. U.S.A. 2014) 2 3
  2. Sequence variant on 8q24 confers susceptibility to urinary bladder cancer. (PMID: 18794855) Kiemeney L.A. … Stefansson K. (Nat. Genet. 2008) 3

Products for CASC11 Gene

Sources for CASC11 Gene

Back to Top