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Aliases for CARSP2 Gene

Subcategory (RNA class) for CARSP2 Gene

lncRNA

Aliases for CARSP2 Gene

  • Cysteinyl-TRNA Synthetase Pseudogene 2 2 3 5

External Ids for CARSP2 Gene

ORGUL Members for CARSP2 Gene

Summaries for CARSP2 Gene

GeneCards Summary for CARSP2 Gene

CARSP2 (Cysteinyl-TRNA Synthetase Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CARSP2 Gene

Genomics for CARSP2 Gene

Regulatory Elements for CARSP2 Gene

Enhancers for CARSP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G114637 0.6 ENCODE 0.1 +154.4 154387 0.1 SMARCE1 HDAC1 CTCF RFX1 SMARCA4 IKZF1 SIN3A MNT CARSP2 LOC100420746
GH08G114680 0.6 ENCODE 0.1 +110.9 110877 1.0 PKNOX1 DPF2 FOXA1 CTBP1 GATA3 JUND CREB1 CUX1 CARSP2 LOC100420746
GH08G114512 0.6 Ensembl 0.1 +279.2 279216 0.6 JUND EED JUN IKZF1 JUNB FOS RELB IKZF2 GABPA LOC100420746 CARSP2
GH08G114681 0.5 ENCODE 0.1 +112.4 112375 0.4 GATA3 RAD51 ATF3 IKZF1 CEBPG CARSP2 LOC100420746
GH08G114539 0.5 ENCODE 0.1 +252.2 252203 0.2 CREB1 CEBPG FOS EP300 ATF2 LOC100420746 CARSP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CARSP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CARSP2 Gene

Chromosome:
8
Start:
114,791,653 bp from pter
End:
114,791,929 bp from pter
Size:
277 bases
Orientation:
Minus strand

Genomic View for CARSP2 Gene

Genes around CARSP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CARSP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CARSP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CARSP2 Gene

Proteins for CARSP2 Gene

Post-translational modifications for CARSP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CARSP2 Gene

Domains & Families for CARSP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CARSP2 Gene

Function for CARSP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CARSP2 Gene

Localization for CARSP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CARSP2 Gene

Pathways & Interactions for CARSP2 Gene

SuperPathways for CARSP2 Gene

No Data Available

Interacting Proteins for CARSP2 Gene

Gene Ontology (GO) - Biological Process for CARSP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CARSP2 Gene

Drugs & Compounds for CARSP2 Gene

No Compound Related Data Available

Transcripts for CARSP2 Gene

mRNA/cDNA for CARSP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CARSP2 Gene

No ASD Table

Relevant External Links for CARSP2 Gene

GeneLoc Exon Structure for
CARSP2
ECgene alternative splicing isoforms for
CARSP2

Expression for CARSP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CARSP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CARSP2 Gene:

CARSP2
genes like me logo Genes that share expression patterns with CARSP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CARSP2 Gene

Orthologs for CARSP2 Gene

Evolution for CARSP2 Gene

ENSEMBL:
Gene Tree for CARSP2 (if available)
TreeFam:
Gene Tree for CARSP2 (if available)

No data available for Orthologs for CARSP2 Gene

Paralogs for CARSP2 Gene

No data available for Paralogs for CARSP2 Gene

Variants for CARSP2 Gene

Relevant External Links for CARSP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CARSP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CARSP2 Gene

Disorders for CARSP2 Gene

No disorders were found for CARSP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CARSP2 Gene

Publications for CARSP2 Gene

No publications were found for CARSP2 Gene.

Products for CARSP2 Gene

Sources for CARSP2 Gene

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