Aliases for CARSP2 Gene
Subcategory (RNA class) for CARSP2 Gene
lncRNA
External Ids for CARSP2 Gene
- HGNC: 50478
- Entrez Gene: 106481707
- Ensembl: ENSG00000253756
ORGUL Members for CARSP2 Gene
Summaries for CARSP2 Gene
GeneCards Summary for CARSP2 Gene
CARSP2 (Cysteinyl-TRNA Synthetase Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.
Additional gene information for CARSP2 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CARSP2 Gene
Genomics for CARSP2 Gene
GeneHancer (GH) Regulatory Elements for CARSP2 Gene
Promoters and enhancers for CARSP2 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH08I114512 | Enhancer | 0.6 | Ensembl | 0.1 | +279.2 | 279216 | 0.6 | JUN JUNB BATF ATF2 ZNF217 JUND IKZF1 RUNX3 IKZF2 | LOC100420746 CARSP2 | |
| GH08I114539 | Enhancer | 0.5 | ENCODE | 0.1 | +252.2 | 252202 | 0.2 | CREB1 ATF7 CEBPG EP300 ATF2 | LOC100420746 CARSP2 | |
| GH08I114637 | Enhancer | 0.4 | ENCODE | 0.1 | +154.4 | 154386 | 0.1 | RFX1 SIN3A MNT | CARSP2 LOC100420746 | |
| GH08I114585 | Enhancer | 0.3 | ENCODE | 0.1 | +205.9 | 205916 | 0.1 | FOXA1 | CARSP2 LOC100420746 | |
| GH08I114679 | Enhancer | 0.2 | ENCODE | 0.1 | +112.7 | 112742 | 0.2 | CARSP2 LOC100420746 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around CARSP2 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for CARSP2 Gene
Genomic Locations for CARSP2 Gene
- chr8:114,791,653-114,791,929
- (GRCh38/hg38)
- Size:
- 277 bases
- Orientation:
- Minus strand
- chr8:115,803,882-115,804,158
- (GRCh37/hg19)
Genomic View for CARSP2 Gene
Genes around CARSP2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 8q23.3 by Ensembl
- 8q23.3 by Entrez Gene
- 8q23.3 by HGNC
CARSP2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CARSP2 Gene
Proteins for CARSP2 Gene
Post-translational modifications for CARSP2 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CARSP2
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CARSP2
- Origene Custom Protein Services for CARSP2
- Search GeneTex for Proteins for CARSP2
No data available for DME Specific Peptides for CARSP2 Gene
Domains & Families for CARSP2 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CARSP2 Gene
Function for CARSP2 Gene
Phenotypes From GWAS Catalog for CARSP2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CARSP2
-
- Search ViGene Biosciences for CARSP2
CRISPR Products
- Browse CRISPR knockouts for CARSP2
miRNA Products
- Search ViGene Biosciences for CARSP2
Inhibitory RNA Products
- Search ViGene Biosciences for CARSP2
Clone Products
- GenScript: Custom all cDNA clones Services for CARSP2
- VectorBuilder custom plasmid, inducible vectors for CARSP2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CARSP2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CARSP2 Gene
Localization for CARSP2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CARSP2 Gene
Transcripts for CARSP2 Gene
mRNA/cDNA for CARSP2 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CARSP2
miRNA Products
- Search ViGene Biosciences for CARSP2
Inhibitory RNA Products
- Search ViGene Biosciences for CARSP2
Clone Products
- GenScript: Custom all cDNA clones Services for CARSP2
- VectorBuilder custom plasmid, inducible vectors for CARSP2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CARSP2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for CARSP2 Gene
NURSA nuclear receptor signaling pathways regulating expression of CARSP2 Gene:
CARSP2
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CARSP2 Gene
Orthologs for CARSP2 Gene
No data available for Orthologs for CARSP2 Gene
Paralogs for CARSP2 Gene
No data available for Paralogs for CARSP2 Gene
Variants for CARSP2 Gene
Additional Variant Information for CARSP2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CARSP2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CARSP2 Gene
Disorders for CARSP2 Gene
No disorders were found for CARSP2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CARSP2 Gene
Publications for CARSP2 Gene
No publications were found for CARSP2 Gene.
Products for CARSP2 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CARSP2
- Origene Custom Protein Services for CARSP2
- Browse OriGene Inhibitory RNA Products For CARSP2
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CARSP2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CARSP2
- GenScript: Custom all cDNA clones Services for CARSP2
- GenScript Custom Purified and Recombinant Proteins Services for CARSP2
- GenScript Custom Assay Services for CARSP2
- GenScript Custom overexpressing Cell Line Services for CARSP2
- Browse GenScript CRISPR for CARSP2
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CARSP2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for CARSP2
- VectorBuilder custom plasmid, inducible vectors for CARSP2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CARSP2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for CARSP2
- Search GeneTex for Proteins for CARSP2
Sources for CARSP2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew