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Aliases & Descriptions for CARD10
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| BIMP1 1, 2, 5 | | CARMA3 1, 2, 3, 5 | | MGC142219 2 |
| | | Descriptions |
|---|
| Bcl10 binding protein and activator of NFKB 2 | | CARD-containing MAGUK 3 protein 2 | | CARD-containing MAGUK protein 3 3 | | Carma 3 3 | | caspase recruitment domain family, member 10 2 | | caspase recruitment domain protein 10 2 |
|
| | Search outside databases for aliases for CARD10 genePrevious GC identifers: GC22M034500 GC22M036129 |
Summaries for CARD10(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CARD10: The caspase recruitment domain (CARD) is a protein module that consists of 6 or 7 antiparallel alpha helices. It participates in apoptosis signaling through highly specific protein-protein homophilic interactions. Like several other CARD proteins, CARD10 belongs to the membrane-associated guanylate kinase (MAGUK) family and activates NF-kappa-B (NFKB; see MIM 164011) through BCL10 (MIM 603517) (Wang et al., 2001 [PubMed 11259443]).[supplied by OMIM] UniProtKB/Swiss-Prot: CAR10_HUMAN, Q9BWT7Function: Activates NF-kappa-B via BCL10 and IKKGene Wiki entry for CARD10 |
Genomic Location for CARD10
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CARD10 gene 
Entrez Gene cytogenetic band: 22q13.1 Ensembl cytogenetic band: 22q13.1 HGNC cytogenetic band: 22q13.1CARD10 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22M036210:
(about GC identifiers)
Start:
|
36,216,346 bp from pter |
End:
|
36,245,495 bp from pter |
Size:
|
29,150 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011520.11
| Proteins for CARD10
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CAR10_HUMAN, Q9BWT7 (See
protein sequence)Recommended Name: Caspase recruitment domain-containing protein 10 Size: 1032 amino acids; 115931 Da
Subunit: CARD10 and BCL10 bind to each other by CARD-CARD interaction. They both participate in a complex with MALT1, where MALT1 binds to BCL10 (By similarity)
Subcellular location: Cytoplasm (By similarity)
Caution: Supposed to contain a SH3, a PDZ and a guanylate kinase-like domain. But none of these 3 domains are detected by PROSITE, Pfam or SMART
Secondary accessions: Q14CQ8 Q5TFG6 Q9UGR5 Q9UGR6 Q9Y3H0Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_055365.2
ENSEMBL proteins: ENSP00000385799 ENSP00000384570 ENSP00000251973
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CARD10: Assays for CARD10: | Protein
Domains/ Families for CARD10(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9BWT7
ProtoNet protein and cluster: Q9BWT7 1 Blocks protein family: IPB001315 CARD interaction domain
UniProtKB/Swiss-Prot: CAR10_HUMAN, Q9BWT7Similarity: Contains 1 CARD domain | Gene Function for CARD10
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014550
Applied Biosystems Silencer® siRNAs for CARD10
Sigma-Aldrich siRNA for CARD10  Sigma-Aldrich shRNA for CARD10  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_014550                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014550                                  untagged cDNA clone in CMV expression vector: NM_014550 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_014550
UniProtKB/Swiss-Prot: CAR10_HUMAN, Q9BWT7Function: Activates NF-kappa-B via BCL10 and IKK4 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Card10):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CARD10
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 2 Sigma-Aldrich "Your Favorite Gene" Pathways for CARD10 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CARD10 
5/7 Interacting proteins for CARD10 (ENSP000002519733) via UniProtKB, MINT, and/or STRING (see all 7
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for CARD10(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CARD10
|
Transcripts for CARD10(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014550
Sigma-Aldrich siRNA for CARD10  Sigma-Aldrich shRNA for CARD10  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_014550 REFSEQ mRNAs for CARD10 gene: NM_014550.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_014550               OriGene GFP tagged cDNA clone in CMV expression vector: NM_014550                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014550                                  untagged cDNA clone in CMV expression vector: NM_014550  Additional cDNA sequence: AF086324.1 AK074906.1 AK296176.1 AY028896.1 AY032928.1 BC032058.1 BC113659.1 BC117403.1 10 DOTS entries: DT.309950 DT.95272280 DT.101961630 DT.100028856 DT.100028855 DT.120648630 DT.120648667 DT.91814521 DT.99971659 DT.95272279 24/113 AceView cDNA sequences (see all 113
):AW024347 AI829451 BQ690010 BI764337 AI739413 AW138129 BM980824 BE906442 BI792107 AI948904 BQ691608 AW612524 AW137435 BE048709 AI948914 AW969602 BQ688908 AA397734 BE465866 AA513369 CA489572 CD625764 AF086324 BU145814
highest scoring ESTs for CARD10:AY028896 AY032928 BG717357 CA489572 AA113168 AA397734 AA399648 AA513369 AA609085 AA642933 Unigene Cluster for CARD10: Caspase recruitment domain family, member 10 Hs.57973 [show with all ESTs]Unigene Representative Sequence: AY028896
GeneLoc Exon Structure
5/12 Alternative Splicing Database (ASD) splice patterns (SP) for CARD10 (see all 12
)
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15a | · | 15b | · | 15c | ^ | 16a | · | 16b | · | 16c | ^ | 17a | · | 17b | ^ | 18a | · | 18b | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 19 | ^ | 20a | · | 20b | · | 20c | ^ | 21 | ^ | 22a | · | 22b | ^ | 23 | ^ | 24a | · | 24b | |
| SP1: | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CARD10
3 Ensembl transcripts including schematic representations: ENST00000406271
ENST00000403299
ENST00000251973
|
Expression for CARD10
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CARD10 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CARD10
1 / 2 / 3 6 probe-sets matching CARD10 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGAATGTACG
SOURCE GeneReport for Unigene cluster: Hs.57973
Expression variation in blood from EXPOLDB for CARD10 UniProtKB/Swiss-Prot: CAR10_HUMAN, Q9BWT7Tissue specificity: Detected in adult heart, kidney and liver; lower levels in intestine, placenta, muscle and lung. Also found in fetal lung, liver and kidney |
Orthologs for CARD10
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CARD10 gene from 5/6 species (see all 6
)
About this table Species with no ortholog for CARD10
ENSEMBL Gene Tree for CARD10 | Paralogs for CARD10(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CARD10 gene
- CARD142 CARD112 CARD92
|
SNPs/Variants for CARD10(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CARD10 (up to first 250kb)
|
Disorders & Mutations for CARD10
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 607209
Human Genome Epidemiology Navigator: CARD10 (1 document)
|
Medical News for CARD10(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CARD10 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/17 PubMed articles for CARD10 gene (see all 17
):- CARD10 is a novel caspase recruitment domain/membrane-associated guanylate kinase family member that interacts with Bcl10 and activates NF-kappa B. (PubMed id 11259443)2, 3, 4 Wang L.... Bertin J. (2001)
- Carma1, a CARD-containing binding partner of Bcl10, induces Bcl10 phosphorylation and NF-kappaB activation. (PubMed id 11356195)2, 3, 4 Gaide O....Tschopp J. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- The DNA sequence of human chromosome 22. (PubMed id 10591208)3, 4 Dunham I....O'Brien K.P. (1999)
- CARMA3 mediates lysophosphatidic acid-stimulated cytokine secretion by bronchial epithelial cells. (PubMed id 18757306)1, 3 Medoff B.D....Xavier R.J. (2009)
- A20 is a negative regulator of BCL10- and CARMA3-mediated activation of NF-kappaB. (PubMed id 18349075)1, 3 Stilo R....Vito P. (2008)
- CXCL8/IL8 stimulates vascular endothelial growth factor (VEGF) expression and the autocrine activation of VEGFR2 in endothelial cells by activating NFkappaB through the CBM (Carma3/Bcl10/Malt1) complex. (PubMed id 19112107)3 Martin D....Gutkind J.S. (2009)
- Pathway-based evaluation of 380 candidate genes and lung cancer susceptibility suggests the importance of the cell cycle pathway. (PubMed id 18676680)3 Hosgood H.D....Lan Q. (2008)
- Protein kinase C alpha-CARMA3 signaling axis links Ras to NF-kappa B for lysophosphatidic acid-induced urokinase plasminogen activator expression in ovarian cancer cells. (PubMed id 17724468)3 Mahanivong C....Huang S. (2008)
- CARMA3/Bcl10/MALT1-dependent NF-kappaB activation mediates angiotensin II-responsive inflammatory signaling in nonimmune cells. (PubMed id 17101977)3 McAllister-Lucas L.M....Lucas P.C. (2007)
|
Search for CARD10
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CARD10
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CARD10
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CARD10(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CARD10(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CARD10:

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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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