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Aliases for CAND1.11 Gene

Subcategory (RNA class) for CAND1.11 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for CAND1.11 Gene

  • Uncharacterized LOC100130460 3

External Ids for CAND1.11 Gene

Previous GeneCards Identifiers for CAND1.11 Gene

  • GC11U902112

Summaries for CAND1.11 Gene

GeneCards Summary for CAND1.11 Gene

CAND1.11 (Uncharacterized LOC100130460) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CAND1.11 Gene

Genomics for CAND1.11 Gene

Regulatory Elements for CAND1.11 Gene

Enhancers for CAND1.11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G010300 1.4 ENCODE dbSUPER 0.7 -2.5 -2453 10.1 MLX DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 TBX21 SSRP1 ZNF610 LOC105376544 LOC101928053 SBF2 CAND1.11 GC11M010302 AMPD3
GH11G010319 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.6 16567 11.3 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 FOS SP5 LOC105376544 SBF2 ADM ENSG00000254865 MRVI1 LYVE1 ENSG00000250041 PIR60970 CAND1.11 AMPD3
GH11G010316 1.3 Ensembl ENCODE dbSUPER 0.4 +9.7 9692 2.2 PKNOX1 FOXA2 ASH2L ZFHX2 ARID3A POLR2A EED SCRT2 ZNF548 RELB ZBED5 ENSG00000254397 RPL21P97 SBF2 ENSG00000250041 AMPD3 PIR60970 CAND1.11
GH11G010314 1.2 Ensembl ENCODE dbSUPER 0.4 +6.6 6550 0.5 PKNOX1 ATF1 SAP130 NFYA CEBPB NFYC RFX5 SP1 RFXANK PBX2 AMPD3 CAND1.11 PIR60970
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CAND1.11 on UCSC Golden Path with GeneCards custom track

Genomic Location for CAND1.11 Gene

Chromosome:
11
Start:
10,308,313 bp from pter
End:
10,430,673 bp from pter
Size:
122,361 bases
Orientation:
Plus strand

Genomic View for CAND1.11 Gene

Genes around CAND1.11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAND1.11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAND1.11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CAND1.11 Gene

Proteins for CAND1.11 Gene

Post-translational modifications for CAND1.11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAND1.11 Gene

Domains & Families for CAND1.11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CAND1.11 Gene

Function for CAND1.11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAND1.11 Gene

Localization for CAND1.11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CAND1.11 Gene

Pathways & Interactions for CAND1.11 Gene

SuperPathways for CAND1.11 Gene

No Data Available

Interacting Proteins for CAND1.11 Gene

Gene Ontology (GO) - Biological Process for CAND1.11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CAND1.11 Gene

Transcripts for CAND1.11 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CAND1.11 Gene

No ASD Table

Relevant External Links for CAND1.11 Gene

GeneLoc Exon Structure for
CAND1.11

No data available for mRNA/cDNA for CAND1.11 Gene

Expression for CAND1.11 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAND1.11 Gene

Orthologs for CAND1.11 Gene

No data available for Orthologs and Evolution for CAND1.11 Gene

Paralogs for CAND1.11 Gene

No data available for Paralogs for CAND1.11 Gene

Variants for CAND1.11 Gene

Sequence variations from dbSNP and Humsavar for CAND1.11 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000008264 -- 10,383,174(+) CACCT(A/G)TAATT intron-variant
rs1000010743 -- 10,352,669(+) ATCAA(A/G)TGTGG intron-variant
rs1000031729 -- 10,421,139(+) TTTTG(A/C/G)CTTTT intron-variant
rs1000043294 -- 10,343,672(+) GGCAA(C/T)ATCAC intron-variant
rs1000053872 -- 10,315,434(+) AAAGT(A/G)CCGGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CAND1.11 Gene

Variant ID Type Subtype PubMed ID
esv2518130 CNV deletion 19546169
esv2676081 CNV deletion 23128226
esv2744101 CNV deletion 23290073
esv2744102 CNV deletion 23290073
esv29122 CNV loss 19812545
esv3547312 CNV deletion 23714750
esv3625355 CNV loss 21293372
esv3625357 CNV loss 21293372
nsv1037131 CNV loss 25217958
nsv1070008 CNV deletion 25765185
nsv1113361 CNV deletion 24896259
nsv1127161 CNV deletion 24896259
nsv1137987 CNV deletion 24896259
nsv476885 CNV novel sequence insertion 20440878
nsv483076 CNV gain+loss 15286789
nsv553477 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for CAND1.11 Gene

Disorders for CAND1.11 Gene

Relevant External Links for CAND1.11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CAND1.11

No disorders were found for CAND1.11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CAND1.11 Gene

Publications for CAND1.11 Gene

  1. Discovery and refinement of loci associated with lipid levels. (PMID: 24097068) . … Abecasis G.R. (Nat. Genet. 2013) 3 64
  2. Genome-wide association study on plasma levels of midregional-proadrenomedullin and C-terminal-pro-endothelin-1. (PMID: 23381795) Verweij N. … van der Harst P. (Hypertension 2013) 3 64
  3. Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure. (PMID: 21909110) Wain L.V. … van Duijn C.M. (Nat. Genet. 2011) 3 64
  4. Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk. (PMID: 21909115) . … Johnson T. (Nature 2011) 3 64
  5. Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich T.M. … Kathiresan S. (Nature 2010) 3 64

Products for CAND1.11 Gene

Sources for CAND1.11 Gene

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