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Aliases for CAMTA1-IT1 Gene

Subcategory (RNA class) for CAMTA1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CAMTA1-IT1 Gene

  • CAMTA1 Intronic Transcript 1 2 3 5
  • CAMTA1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for CAMTA1-IT1 Gene

Previous GeneCards Identifiers for CAMTA1-IT1 Gene

  • GC00U933967

Summaries for CAMTA1-IT1 Gene

GeneCards Summary for CAMTA1-IT1 Gene

CAMTA1-IT1 (CAMTA1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CAMTA1-IT1 Gene

Genomics for CAMTA1-IT1 Gene

Regulatory Elements for CAMTA1-IT1 Gene

Enhancers for CAMTA1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G007378 1 Ensembl ENCODE 0.4 +11.1 11133 2.2 MXI1 JUN MAX RBBP5 GATA2 SCRT2 SMC3 RCOR1 CHD2 TCF7L2 LOC102725193 CAMTA1-IT1
GH01G007297 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -68.6 -68596 5.8 PKNOX1 FEZF1 BRCA1 GLIS2 FOS TSHZ1 SMARCB1 ZNF518A GLIS1 MYNN LOC101928836 GC01M007245 CAMTA1-IT1
GH01G007333 1.1 Ensembl ENCODE 0.3 -34.0 -34036 1.5 PKNOX1 ZSCAN4 INSM2 BRCA1 ZNF366 SCRT2 SMARCC2 RCOR1 SMARCC1 ZNF680 LOC102725193 CAMTA1-IT1 GC01M007245
GH01G007388 0.9 Ensembl ENCODE 0.3 +20.3 20310 1.8 CTCF MAZ RFX1 SIN3A BMI1 ZIC2 ZFHX2 ZNF548 PRDM10 EGR2 LOC102725193 CAMTA1-IT1
GH01G007335 0.6 ENCODE 0.3 -33.1 -33055 0.2 GTF2F1 GATA3 RCOR1 KDM1A TRIM28 TCF7L2 CAMTA1-IT1 GC01M007245
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CAMTA1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CAMTA1-IT1 Gene

Chromosome:
1
Start:
7,368,790 bp from pter
End:
7,370,270 bp from pter
Size:
1,481 bases
Orientation:
Plus strand

Genomic View for CAMTA1-IT1 Gene

Genes around CAMTA1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAMTA1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAMTA1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CAMTA1-IT1 Gene

Proteins for CAMTA1-IT1 Gene

Post-translational modifications for CAMTA1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAMTA1-IT1 Gene

Domains & Families for CAMTA1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CAMTA1-IT1 Gene

Function for CAMTA1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAMTA1-IT1 Gene

Localization for CAMTA1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CAMTA1-IT1 Gene

Pathways & Interactions for CAMTA1-IT1 Gene

SuperPathways for CAMTA1-IT1 Gene

No Data Available

Interacting Proteins for CAMTA1-IT1 Gene

Gene Ontology (GO) - Biological Process for CAMTA1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CAMTA1-IT1 Gene

Drugs & Compounds for CAMTA1-IT1 Gene

No Compound Related Data Available

Transcripts for CAMTA1-IT1 Gene

mRNA/cDNA for CAMTA1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CAMTA1-IT1 Gene

No ASD Table

Relevant External Links for CAMTA1-IT1 Gene

GeneLoc Exon Structure for
CAMTA1-IT1
ECgene alternative splicing isoforms for
CAMTA1-IT1

Expression for CAMTA1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CAMTA1-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for CAMTA1-IT1 Gene

This gene is overexpressed in Testis (x14.6).
genes like me logo Genes that share expression patterns with CAMTA1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAMTA1-IT1 Gene

Orthologs for CAMTA1-IT1 Gene

Evolution for CAMTA1-IT1 Gene

ENSEMBL:
Gene Tree for CAMTA1-IT1 (if available)
TreeFam:
Gene Tree for CAMTA1-IT1 (if available)

No data available for Orthologs for CAMTA1-IT1 Gene

Paralogs for CAMTA1-IT1 Gene

No data available for Paralogs for CAMTA1-IT1 Gene

Variants for CAMTA1-IT1 Gene

Relevant External Links for CAMTA1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CAMTA1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CAMTA1-IT1 Gene

Disorders for CAMTA1-IT1 Gene

No disorders were found for CAMTA1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CAMTA1-IT1 Gene

Publications for CAMTA1-IT1 Gene

No publications were found for CAMTA1-IT1 Gene.

Products for CAMTA1-IT1 Gene

Sources for CAMTA1-IT1 Gene

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