CAMSAP2 Gene
protein-coding GIFtS : 46
GCID: GC01 P200709
calmodulin regulated spectrin-associated protein family,... (Previous name: calmodulin regulated spectrin-associated protein 1-like... ) (Previous symbol: CAMSAP1L1 )
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Aliasesfor CAMSAP2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Calmodulin Regulated Spectrin-Associated Protein Family, Member 2 1 2 CAMSAP1L11 2 3 Calmodulin Regulated Spectrin-Associated Protein 1-Like 11 2 KIAA10781 3 Calmodulin-Regulated Spectrin-Associated Protein 1-Like Protein 12 3 Calmodulin-Regulated Spectrin-Associated Protein 22
Export aliases for CAMSAP2 gene to outside databases
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Summariesfor CAMSAP2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section --
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Genomic Viewsfor CAMSAP2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004487.19 Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for CAMSAP2 Other transcription factors Search SABiosciences Chromatin IP Primers for CAMSAP2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CAMSAP2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1q32.1 Ensembl cytogenetic band: 1q32.1 HGNC cytogenetic band: 1q32 CAMSAP2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01P200709: view genomic region
(about GC identifiers )
Start:
200,708,686 bp from pter
End:
200,829,832 bp from pter
Size:
121,147 bases
Orientation:
plus strand
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Proteinsfor CAMSAP2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CAMP2_HUMAN, Q08AD1 (See
protein sequence )Recommended Name: Calmodulin-regulated spectrin-associated protein 2 Size : 1489 amino acids; 168089 Da
Subcellular location : Cytoplasm, cytoskeleton (Potential)
Sequence caution : Sequence=AAH56910.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Secondary accessions : B1APG6 Q08AD2 Q6PGN8 Q96FB3 Q9UG20 Q9UPS4Alternative splicing : 3 isoforms : Q08AD1-1 Q08AD1-2 Q08AD1-3 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for CAMSAP2: NX_Q08AD1 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q08AD1 CAMSAP2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_982284.1 ENSEMBL proteins: ENSP00000351684 ENSP00000416800 ENSP00000236925 ENSP00000395365 ENSP00000434766 Human Recombinant Protein Products: Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view) : About this table
CAMSAP2 for ontologies About GeneDecksing CAMSAP2 Antibody Products: Assay Products for CAMSAP2:
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Protein
Domains / Familiesfor CAMSAP2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CAMSAP2 for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q08AD1 ProtoNet protein and cluster: Q08AD1
UniProtKB/Swiss-Prot: CAMP2_HUMAN, Q08AD1 Domain : The CKK domain binds microtubules (By similarity)Similarity : Belongs to the CAMSAP1 familySimilarity : Contains 1 CH (calponin-homology) domainSimilarity : Contains 1 CKK domain
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Functionfor CAMSAP2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript Custom all cDNA clones Services for CAMSAP2 Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CAMSAP2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CAMSAP2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CAMSAP2
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005515 protein binding
IPI -- GO:0008017 microtubule binding
IEA --
CAMSAP2 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for CAMSAP2 :
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Pathways & Interactionsfor CAMSAP2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CAMSAP2 STRING Interaction
Network Preview (showing 2 interactants - click image to see more details)5/10 Interacting proteins for CAMSAP2 (Q08AD1 1 , 3 ENSP00000351684 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 10 )About this table
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Drugs & Compoundsfor CAMSAP2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for CAMSAP2 Search CenterWatch for drugs/clinical trials and news about CAMSAP2 / CAMP2
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Transcriptsfor CAMSAP2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CAMSAP2 gene: NM_203459.1 Unigene Cluster for CAMSAP2:
Calmodulin regulated spectrin-associated protein family, member 2 Hs.23585 [show with all ESTs ] Unigene Representative Sequence: NM_203459 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000358823 (uc001gvk.3 uc001gvl.3 uc001gvm.3 ) ENST00000413307 ENST00000236925 ENST00000532732 ENST00000447701 ENST00000475326 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript Custom all cDNA clones Services for CAMSAP2 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CAMSAP2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CAMSAP2
Additional cDNA sequence: AB029001.2 AF087998.1 AK026348.1 AK095640.1 AK126821.1 AL110158.1 BC011385.1 BC029449.1 BC045721.1 BC056910.1 BC065508.1 BC125229.1 BC125230.1
9 DOTS entries : DT.453837 DT.100706453
DT.99988369 DT.100766693 DT.97788814 DT.70103338 DT.75101497 DT.95266531 DT.75170223 24/192 AceView cDNA sequences (see all 192 ):
BM786794 BU155796 BC045721 AI912919 BM263202 BQ226555 NM_203459 CA397797 AA687882 BG571189 AA992387 CA388618 CB124482 BF507449 BC065508 AF087998 AW008233 AK095640 AK126821 BF434784 BE349890 BU619402 AA146963 BQ670614 GeneLoc Exon Structure
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Expression for CAMSAP2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CAMSAP2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GCACCAAAAA
About this image CAMSAP2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See CAMSAP2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CAMSAP2 SOURCE GeneReport for Unigene cluster: Hs.23585 SABiosciences Custom PCR Arrays for CAMSAP2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CAMSAP2Browse OriGene validated miRNA SYBR primer pairs Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat CAMSAP2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CAMSAP2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CAMSAP2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CAMSAP2
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Orthologsfor CAMSAP2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for CAMSAP2 gene from 5/18 species (see all 18 ) About this table
ENSEMBL Gene Tree for CAMSAP2 (if available)TreeFam Gene Tree for CAMSAP2 (if available)
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Paralogsfor CAMSAP2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CAMSAP2 gene CAMSAP1 2 CAMSAP3 2 2 SIMAP similar genes for CAMSAP2 using alignment to 3 protein entries: CAMP2_HUMAN (see all proteins ):KIAA1543 CAMSAP1
CAMSAP2 for paralogs About GeneDecksing
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Genomic Variantsfor CAMSAP2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CAMSAP2 (200708686 - 200829832 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CAMSAP2: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CAMSAP2
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Disorders
/ Diseasesfor CAMSAP2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CAMSAP2 for disorders About GeneDecksing
OMIM gene information: 613775
OMIM disorders : --1 disease for CAMSAP2 : About MalaCards choroiditis Export disorders for CAMSAP2 gene to outside databases
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Publicationsfor CAMSAP2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CAMSAP2 gene, integrated from 9 sources (see all 24 ): (articles sorted by number of sources associating them with CAMSAP2) Utopia : connect your pdf to the dynamic world of online information
The CKK domain (DUF1781) binds microtubules and defines the CAMSAP/ssp4 family of animal proteins. (PubMed id 19508979) 1 , 3 Baines A.J.... Phillips G.W. (2009) KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers. (PubMed id 15897902) 1 , 3 Corson T.W.... Gallie B.L. (2005) Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10470851) 1 , 2 Kikuno R....Ohara O. (1999) Two-stage genome-wide association study identifies var iants in CAMSAP1L1 as susceptibility loci for epilepsy in Chinese. (PubMed id 22116939) 1 Guo Y....Kwan P. (2012) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048) 1 Danielsen J.M....Nielsen M.L. (2011) Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PubMed id 20068231) 2 Olsen J.V....Mann M. (2010) Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332) 2 Mayya V.... Han D.K. (2009) Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201) 1 Abdelmohsen K....Gorospe M. (2009)
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External Searches for CAMSAP2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CAMSAP2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing CAMSAP2 gene
(According to HUGE )
About This Section
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Specialized Databases showing CAMSAP2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for CAMSAP2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for CAMSAP2 gene: Search GeneIP for patents involving CAMSAP2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CAMSAP2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for CAMSAP2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CAMSAP2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CAMSAP2 Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CAMSAP2 OriGene 3'-UTR Clone for CAMSAP2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CAMSAP2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CAMSAP2 OriGene Custom Protein Services for CAMSAP2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CAMSAP2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CAMSAP2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CAMSAP2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CAMSAP2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CAMSAP2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CAMSAP2
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CAMSAP2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CAMSAP2
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CAMSAP2
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