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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CAMKK2 Gene

protein-coding   GIFtS: 67
GCID: GC12M121675

calcium/calmodulin-dependent protein kinase kinase 2, beta

 Explore 15 diseases affiliated with
CAMKK2 via our new
 Human Malady Compendium 
Biological research products
for CAMKK2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Calcium/Calmodulin-Dependent Protein Kinase Kinase 2, Beta1 2     Calcium/Calmodulin-Dependent Protein Kinase Beta2
CAMKKB1 2 3     Calcium/Calmodulin-Dependent Protein Kinase Kinase 22
CAMKK1 2     CAMKK Beta Protein2
KIAA07871 3     EC 2.7.11.173
CaM-Kinase Kinase 22 3     Calcium/Calmodulin-Dependent Protein Kinase Kinase Beta3
CaM-Kinase Kinase Beta2 3     CaMKK 23
CaM-KK 22 3     CaMKK Beta3
CaM-KK Beta2 3     EC 2.7.118
MGC152541     

External Ids:    HGNC: 14701   Entrez Gene: 106452   Ensembl: ENSG000001109317   OMIM: 6150025   UniProtKB: Q96RR43   

Export aliases for CAMKK2 gene to outside databases

Previous GC identifers: GC12M120537 GC12M121255 GC12M121458 GC12M120087 GC12M120138 GC12M120159 GC12M118685


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CAMKK2:
The product of this gene belongs to the Serine/Threonine protein kinase family, and to the Ca(2+)/calmodulin-dependent
protein kinase subfamily. The major isoform of this gene plays a role in the calcium/calmodulin-dependent (CaM) kinase
cascade by phosphorylating the downstream kinases CaMK1 and CaMK4. Protein products of this gene also phosphorylate
AMP-activated protein kinase (AMPK). This gene has its strongest expression in the brain and influences signalling
cascades involved with learning and memory, neuronal differentiation and migration, neurite outgrowth, and synapse
formation. Alternative splicing results in multiple transcript variants encoding distinct isoforms. The identified
isoforms differ in their ability to undergo autophosphorylation and to phosphorylate downstream kinases. (provided by
RefSeq, Jul 2012)

UniProtKB/Swiss-Prot: KKCC2_HUMAN, Q96RR4
Function: Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade
involved in a number of cellular processes. Isoform 1, isoform 2 and isoform 3 phosphorylate CAMK1 and CAMK4. Isoform
3 phosphorylates CAMK1D. Isoform 4, isoform 5 and isoform 6 lacking part of the calmodulin-binding domain are
inactive. Efficiently phosphorylates 5'-AMP-activated protein kinase (AMPK) trimer, including that consisting of
PRKAA1, PRKAB1 and PRKAG1. This phosphorylation is stimulated in response to Ca(2+) signals (By similarity). Seems to
be involved in hippocampal activation of CREB1 (By similarity). May play a role in neurite growth. Isoform 3 may
promote neurite elongation, while isoform 1 may promoter neurite branching

summary for CAMKK2:
Calmodulin-dependent kinases (CaMK) are a family of serine/threonine kinases that mediate many of the second
messenger effects of Ca2+. At basal Ca2+ levels, CaMKs are maintained in a dormant state through
autoinhibition. Increases in Ca2+ levels allows calmodulin to relieve this autoinhibition and activate the
kinase activity. There are two main classes of CaMKs; mulitfunctional CaMKs (CaMKK, CaMKI, CaMKII and
CaMKIV) which have multiple downstream targets and substrate-specific CaMKs (CaMKIII) which have only one
known downstream target. All CaMKs, with the exception of CaMKII, exist as monomers and most are expressed
ubiquitously. Some subtypes display specific distributions, for example, CaMKIVbeta is expressed exclusively
in cerebellar granule cells. CaMKs have numerous cellular functions and they influence processes as diverse
as gene transcription, cell survival, apoptosis, cytoskeletal re-organization and learning and memory.

Gene Wiki entry for CAMKK2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_009775.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CAMKK2 gene promoter:
         CREB   deltaCREB   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): CAMKK2 promoter sequence
   Search SABiosciences Chromatin IP Primers for CAMKK2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CAMKK2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q24.2   Ensembl cytogenetic band:  12q24.31   HGNC cytogenetic band: 12q24.2

CAMKK2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CAMKK2 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M121675:  view genomic region     (about GC identifiers)

Start:
121,675,495 bp from pter      End:
121,736,111 bp from pter
Size:
60,617 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KKCC2_HUMAN, Q96RR4 (See protein sequence)
Recommended Name: Calcium/calmodulin-dependent protein kinase kinase 2  
Size: 588 amino acids; 64746 Da
Subunit: Interacts with calmodulin (By similarity)
Subcellular location: Nucleus (By similarity). Cytoplasm. Cell projection. Note=Predominantly nuclear in unstimulated
cells (By similarity). Found in the cytoplasm and neurites after forskolin induction
Sequence caution: Sequence=AAC72943.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=BAA34507.2; Type=Erroneous initiation; Note=Translation N-terminally shortened; Sequence=CAD38990.1;
Type=Miscellaneous discrepancy; Note=Intron retention;
1 PDB 3D structure from and Proteopedia for CAMKK2:
2ZV2 (3D)    
Secondary accessions: A8K7Q7 O94883 Q8IUG2 Q8IUG3 Q8N3I4 Q8WY03 Q8WY04 Q8WY05 Q8WY06 Q96RP1 Q96RP2
Q96RR3 Q9BWE9 Q9UER3 Q9UES2 Q9Y5N2
Alternative splicing: 7 isoforms:  Q96RR4-1   Q96RR4-2   Q96RR4-3   Q96RR4-4   Q96RR4-5   Q96RR4-6   Q96RR4-7   (Inactive. Does not activate CAMK1 and CAMK4)

Explore the universe of human proteins at neXtProt for CAMKK2: NX_Q96RR4

Post-translational modifications:

  • Autophosphorylated and phosphorylated by PKA. Each isoform may show a different pattern of phosphorylation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q96RR4

  • 4 DME Specific Peptides for CAMKK2 (Q96RR4)
     DLITRML  GHIKIAD  GKGSYGVV  GTPAFMAPE 

    CAMKK2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (9 alternative transcripts): 
    NP_001257414.1  NP_001257415.1  NP_006540.3  NP_705719.2  NP_705720.1  NP_757363.1  NP_757364.1  NP_757365.1  
    NP_757380.1  

    ENSEMBL proteins: 
     ENSP00000376266   ENSP00000321230   ENSP00000445944   ENSP00000336634   ENSP00000312741  
     ENSP00000441352   ENSP00000388368   ENSP00000384600   ENSP00000384591   ENSP00000388273  
     ENSP00000376265   ENSP00000444894   ENSP00000445400  

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    OriGene Purified Proteins (see all 2): CAMKK2
    OriGene Protein Over-expression Lysate: CAMKK2
    OriGene Custom Protein Services for CAMKK2 
    GenScript Custom Purified and Recombinant Proteins Services for CAMKK2
    Novus Biologicals CAMKK2 Proteins
    Novus Biologicals CAMKK2 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for CAMKK2

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular TAS11395482
    GO:0005737cytoplasm IDA--


    CAMKK2 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for CAMKK2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CAMKK2 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR000719 Prot_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry Q96RR4

    ProtoNet protein and cluster: Q96RR4

    UniProtKB/Swiss-Prot: KKCC2_HUMAN, Q96RR4
    Domain: The autoinhibitory domain overlaps with the calmodulin binding region and may be involved in intrasteric
    autoinhibition
    Domain: The RP domain (arginine/proline-rich) is involved in the recognition of CAMKI and CAMK4 as substrates (By
    similarity)
    Similarity: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: KKCC2_HUMAN, Q96RR4
    Function: Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade
    involved in a number of cellular processes. Isoform 1, isoform 2 and isoform 3 phosphorylate CAMK1 and CAMK4. Isoform
    3 phosphorylates CAMK1D. Isoform 4, isoform 5 and isoform 6 lacking part of the calmodulin-binding domain are
    inactive. Efficiently phosphorylates 5'-AMP-activated protein kinase (AMPK) trimer, including that consisting of
    PRKAA1, PRKAB1 and PRKAG1. This phosphorylation is stimulated in response to Ca(2+) signals (By similarity). Seems to
    be involved in hippocampal activation of CREB1 (By similarity). May play a role in neurite growth. Isoform 3 may
    promote neurite elongation, while isoform 1 may promoter neurite branching
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Activated by Ca(2+)/calmodulin. Binding of calmodulin may relieve intrasteric autoinhibition.
    Autophosphorylation does not alter activity or regulation by Ca(2+)/calmodulin. In part, activity is independent on
    Ca(2+)/calmodulin (By similarity)
    Induction: Isoform 1 is up-regulated by PKA pathway

         Genatlas biochemistry entry for CAMKK2:
    calcium/calmodulin-dependent protein kinase,kinase 2,beta,expressed as a flag-tagged protein in human non small cell
    lung cancer

    Enzyme Numbers (IUBMB): EC 2.7.112 EC 2.7.11.171

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    hsa-miR-3194-5p hsa-miR-411 hsa-miR-29a hsa-miR-25 hsa-miR-16-1* hsa-miR-30d hsa-miR-218 hsa-miR-342-3p
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004674protein serine/threonine kinase activity ----
    GO:0004683calmodulin-dependent protein kinase activity IEA--
    GO:0004713protein tyrosine kinase activity TAS11395482
    GO:0005509calcium ion binding IDA11395482
    GO:0005516calmodulin binding TAS11395482


    CAMKK2 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for CAMKK2:
     Decreased focal adhesion (FA)   Decreased number of cells in m  Increased cell death HMECs cel 

    Animal Models:
         Mouse knock-outs for CAMKK2: Camkk2tm1Tch Camkk2tm1.1Arm Camkk2tm1Kpg
         6 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Camkk2):
     adipose tissue  behavior/neurological  growth/size  homeostasis/metabolism  nervous system 
     no phenotypic analysis 

    CAMKK2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Immune response_Function of MEF2 in T lymphocytes
    Immune response_Function of MEF2 in T lymphocytes1.00
    Immune response Function of MEF2 in T lymphocytes0.90
    2Signal transduction Calcium signaling
    Signal transduction Calcium signaling1.00
    Signal transduction_Calcium signaling0.97
    3Development Role of HDAC and calcium/calmodulin-dependent kinase (CaMK) in control of skeletal myogenesis
    Development Role of HDAC and calcium/calmodulin-dependent kinase (CaMK) in control of skeletal myogenesis1.00
    Development_Role of HDAC and calcium/calmodulin-dependent kinase (CaMK) in control of skeletal myogenesis0.97
    4Signal transduction_IP3 signaling
    Signal transduction_IP3 signaling1.00
    Signal transduction IP3 signaling0.92
    5AMPK signaling
    AMPK signaling1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    4 EMD Millipore Pathways for CAMKK2
        Signal transduction Calcium signaling
    Immune response Function of MEF2 in T lymphocytes
    Signal transduction IP3 signaling
    Development Role of HDAC and calcium/calmodulin-dependent kinase (CaMK) in control of skeletal myogenesis

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CAMKK2
        IP3 Pathway
    Dopamine-DARPP32 Feedback onto cAMP Pathway

    4 GeneGo (Thomson Reuters) Pathways for CAMKK2
        Development Role of HDAC and calcium/calmodulin-dependent kinase (CaMK) in control of skeletal myogenesis
    Immune response Function of MEF2 in T lymphocytes
    Signal transduction Calcium signaling
    Signal transduction IP3 signaling

    1 BioSystems Pathway for CAMKK2 
        AMPK signaling


    1         Kegg Pathway  (Kegg details for CAMKK2):
        Adipocytokine signaling pathway


    CAMKK2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CAMKK2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/475 Interacting proteins for CAMKK2 (Q96RR43 ENSP000003127414) via UniProtKB, MINT, STRING, and/or I2D (see all 475)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RPL9P329693I2D: score=1 
    RPL9P7P329693I2D: score=1 
    RPL9P8P329693I2D: score=1 
    RPL9P9P329693I2D: score=1 
    CALM1P621583, ENSP000003494674I2D: score=5 STRING: ENSP00000349467
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000165MAPK cascade TAS11395482
    GO:0006468protein phosphorylation IDA11395482
    GO:0019722calcium-mediated signaling TAS11395482
    GO:0045859regulation of protein kinase activity TAS11395482
    GO:0045893positive regulation of transcription, DNA-dependent TAS11395482


    CAMKK2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CAMKK2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Enzo Life Sciences drugs & compounds for CAMKK2

    Compounds for CAMKK2 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    STO-609 acetateSelective CaM kinase kinase inhibitor[52029-86-4]

    3 HMDB Compounds for CAMKK2    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    CalciumCa (see all 2)7440-70-2--
    6 Novoseek chemical compound relationships for CAMKK2 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    calcium 53.9 39 9859994 (3), 19958286 (2), 16497986 (2), 9822657 (2) (see all 19)
    atp 33.6 4 18687367 (3), 10770941 (1)
    nmda 30.1 5 9859994 (2), 15689566 (1), 18184567 (1)
    serine 24.1 1 9859994 (1)
    forskolin 23.5 3 10187789 (1), 15469938 (1), 9195898 (1)
    cyclic amp 8.19 1 15764842 (1)

    Search CenterWatch for drugs/clinical trials and news about CAMKK2 / KKCC2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CAMKK2 gene (9 alternative transcripts): 
    NM_001270485.1  NM_001270486.1  NM_006549.3  NM_153499.2  NM_153500.1  NM_172214.2  NM_172215.2  NM_172216.1  
    NM_172226.2  

    Unigene Cluster for CAMKK2:

    Calcium/calmodulin-dependent protein kinase kinase 2, beta
    Hs.297343  [show with all ESTs]
    Unigene Representative Sequence: NM_006549
    16 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000392474 ENST00000347034 ENST00000538733 ENST00000337174(uc001tzt.3)
    ENST00000324774(uc001tzu.3 uc001tzv.3 uc001tzw.3 uc001tzx.3 uc001tzy.3 uc001uaa.1)
    ENST00000545538(uc001tzz.1) ENST00000412367 ENST00000404169(uc001uad.2)
    ENST00000402834 ENST00000446440 ENST00000392473(uc001uab.3 uc001uac.3)
    ENST00000535524 ENST00000542540 ENST00000539380 ENST00000543477 ENST00000544485


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    Additional cDNA sequence: 

    AB018330.2 AB081336.1 AB081337.1 AF091074.1 AF101264.1 AF287630.1 AF287631.1 AF321385.1 
    AF321386.1 AF321387.1 AF321388.1 AF425668.1 AK024748.1 AK292072.1 AK300865.1 AK311473.1 
    AL834322.1 BC000318.2 BC026060.2 

    23 DOTS entries:

    DT.100824426  DT.95150357  DT.95150349  DT.455652  DT.100824425  DT.100824423  DT.86846422  DT.95150335 
    DT.92446457  DT.121180026  DT.121180044  DT.100824430  DT.75101428  DT.95150362  DT.100824424  DT.121180053 
    DT.100824429  DT.121180024  DT.121180014  DT.121180045  DT.121180049  DT.91744128  DT.95150355 

    24/328 AceView cDNA sequences (see all 328):

    AI815054 NM_172214 T31199 BE939864 AI656058 BF926869 AA491295 AI928437 
    W70128 AI184642 NM_172226 BM718658 AA922204 CB152090 AA678930 BI225425 
    CB154461 NM_006549 AI972885 CA431335 NM_172215 BM908574 BM547242 T33239 

    GeneLoc Exon Structure

    5/16 Alternative Splicing Database (ASD) splice patterns (SP) for CAMKK2 (see all 16)    About this scheme

    ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c · 7d · 7e ^ 8a · 8b ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b · 13c · 13d ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                      -     -                 -     -     -     -     -                       -     -                                       

    ExUns: 14 ^ 15 ^ 16a · 16b · 16c ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24a · 24b ^ 25
    SP1:                                                                    -     -     -         
    SP2:                                                                                          
    SP3:                                                  -           -     -                     
    SP4:                                                  -                 -                     
    SP5:                                                                                          


    ECgene alternative splicing isoforms for CAMKK2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CAMKK2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AACTTAAGAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    CAMKK2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Head MesenchymeBranchial Arch 1Cranial Neural Crest CellsNeural Crest
    HeartEndocardiumEndocardial Tube CellsEndocardium
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Definitive endoderm-like cells (A scalable, suspensi...)

    See CAMKK2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CAMKK2

    SOURCE GeneReport for Unigene cluster: Hs.297343

    UniProtKB/Swiss-Prot: KKCC2_HUMAN, Q96RR4
    Tissue specificity: Ubiquitously expressed with higher levels in the brain. Intermediate levels are detected in spleen,
    prostate, thyroid and leukocytes. The lowest level is in lung

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CAMKK2 gene from 6/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CAMKK21 calcium/calmodulin-dependent protein kinase kinase more 76.41(n)
    80.12(a)
      396405  XM_415134.2  XP_415134.2 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc:1947371 zgc:194737 67.08(n)
    69.63(a)
      100170786  NM_001130625.1  NP_001124097.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG176981 , 3 protein amino acid phosphorylation protein
    serine/threonine more3
    CG176981
    54(a)3
    54.05(n)1
    57.03(a)1
      43799191  NM_001043169.11  NP_001036634.11 
    worm
    (Caenorhabditis elegans)
    Secernentea ckk-13   -- 56(a)   III(5723519-5725386)   --
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons GRIK26
    ATSNAK26
    geminivirus rep interacting kinase 2
    calcium/calmodulin-dependent protein kinase kinase...
    30(a)
    29(a)
    many ↔ many
    many ↔ many
    5(24339229-24342590)
    3(16570478-16573762)
    rice
    (Oryza sativa)
    Liliopsida --
    CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calciu...
    27(a)
    1 → many
    3(28701639-28709268)


    ENSEMBL Gene Tree for CAMKK2 (if available)
    TreeFam Gene Tree for CAMKK2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CAMKK2 gene
    CAMKK12  
    18/38 SIMAP similar genes for CAMKK2 using alignment to 6 protein entries:     KKCC2_HUMAN (see all proteins) (see all similar genes):
    CAMKK1    STK38L    MAPK8    RPS6KA1    STK11    BRSK2
    FGFR1    MARK4    RPS6KA2    CAMK1    FLT4    MAPK14
    BRAF    CDK7    HUNK    MAP4K5    PHKG1    TXK

    CAMKK2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1606 NCBI SNPs in CAMKK2 are shown (see all 1606    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs116098771,2
    H--121675130(+) tttttA/Taattt 7 -- ds5001 int10--------
    rs116117621,2
    H--121675132(+) ttttaA/Tttttt 7 -- int1 ds50010--------
    rs342837011,2
    C,--121675150(+) TTTTT-/AAGAGA 7 -- int1 ds50010--------
    rs798861211,2
    C--121675150(+) TTTTTA/TAGAGA 7 -- ds5001 int10--------
    rs71361061,2
    C,A,--121675268(+) cggccG/Agcacc 7 -- ds5001 int13Minor allele frequency- A:0.11NA WA 240
    rs1394091671,2
    --121675289(+) ACCCAC/GTCACA 7 -- ds5001 int10--------
    rs108498611,2
    C,F,A,H,--121675307(+) CTGGCG/ACTACT 7 -- ds5001 int18Minor allele frequency- A:0.23NS EA CSA WA NA 750
    rs1164331041,2
    C,F,--121675479(+) ACCTCC/TCCAAG 7 -- ds5001 int11Minor allele frequency- T:0.11WA 118
    rs16535861,2
    C,F,O,A,H,--121675575(+) TAGTTG/TTCTCT 7 -- ut31 ese329Minor allele frequency- N:0.00MN EA NA NS CSA WA 3168
    rs113081,2
    C,--121675684(-) TGCCCG/AATGCT 7 -- ut31 ese31Minor allele frequency- A:0.00MN 184

    HapMap Linkage Disequilibrium report for CAMKK2 (121675495 - 121736111 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CAMKK2: --
    Human Gene Mutation Database (HGMD): CAMKK2

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CAMKK2 for disorders           About GeneDecksing

    OMIM gene information: 615002    OMIM disorders: --

    15 diseases for CAMKK2:    About MalaCards
    bipolar affective disorder    amyotrophic lateral sclerosis    lateral sclerosis    mantle cell lymphoma
    anxiety disorder    neuronitis    cervical cancer    cervicitis
    lung cancer    breast cancer    hypoxia    schizophrenia
    thyroiditis    malaria    prostatitis

    Human Genome Epidemiology (HuGE) Navigator: CAMKK2 (4 documents)

    Export disorders for CAMKK2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CAMKK2 gene, integrated from 9 sources (see all 102):
    (articles sorted by number of sources associating them with CAMKK2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning, expression and chromosomal localization of human Ca2+/calmodulin-dependent protein kinase kinase. (PubMed id 9662074)1, 2, 3, 9 Hsu L.-S.... Chen J.-Y. (1998)
    2. Human Ca2+/calmodulin-dependent protein kinase kinase beta gene encodes multiple isoforms that display distinct kinase activity. (PubMed id 11395482)1, 2, 9 Hsu L.-S.... Chen J.-Y. (2001)
    3. Components of a calmodulin-dependent protein kinase cascade. Molecular cloning, functional characterization and cellular localization of Ca2+/calmodulin-dependent protein kinase kinase beta. (PubMed id 9822657)1, 2, 9 Anderson K.A.... Means A.R. (1998)
    4. Identification and characterization of novel components of a Ca2+/calmodulin-dependent protein kinase cascade in HeLa cells. (PubMed id 12935886)1, 2, 9 Ishikawa Y....Kobayashi R. (2003)
    5. Differential effects of PKA-controlled CaMKK2 variants on neuronal differentiation. (PubMed id 21957496)1, 2 Cao W....Xie J. (2011)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones. (PubMed id 12168954)1, 2 Nakajima D.... Nagase T. (2002)
    8. Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 9872452)1, 2 Nagase T.... Ohara O. (1998)
    9. Inhibition of the Ca2+/calmodulin-dependent protein kinase I cascade by cAMP-dependent protein kinase. (PubMed id 10187789)1, 9 Matsushita M. and Nairn A.C. (1999)
    10. Association of polymorphisms in P2RX7 and CaMKKb with anxiety disorders. (PubMed id 17197037)1, 9 Erhardt A....Holsboer F. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10645 HGNC: 1470 AceView: CAMKK2 Ensembl:ENSG00000110931 euGenes: HUgn10645
    ECgene: CAMKK2 Kegg: 10645 H-InvDB: CAMKK2

    (According to HUGE)
    About This Section
    HUGE: KIAA0787

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CAMKK2 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CAMKK2 gene:
    Search GeneIP for patents involving CAMKK2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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