CAMK2A Gene
protein-coding GIFtS : 69
GC05M149579
calcium/calmodulin-dependent protein kinase II alpha (Previous name: calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: CAMKA )
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Aliases & Descriptions for CAMK2A
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases CAMKA 2 , 3 , 5 CaMKIINalpha 1 , 2 EC 2.7.11.17 3 KIAA0968 1 , 2 , 3 , 5 OTTHUMP00000165787 2 OTTHUMP00000165788 2
Descriptions CaM kinase II alpha subunit 2 CaM kinase II subunit alpha 3 CaM-kinase II alpha chain 2 , 3 CaMK-II alpha subunit 2 CaMK-II subunit alpha 3 calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha 1 , 2 calcium/calmodulin-dependent protein kinase II alpha 2 calcium/calmodulin-dependent protein kinase II alpha-B subunit 2 calcium/calmodulin-dependent protein kinase type II alpha chain 2
Search outside databases for aliases for CAMK2A genePrevious GC identifers: GC05M149669 GC05P150272 GC05M149582 GC05M149627
Summaries for CAMK2A (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for CAMK2A : The product of this gene belongs to the serine/threonine protein kinases family, and to theCa(2+)/calmodulin-dependent protein kinases subfamily. Calcium signaling is crucial for severalaspects of plasticity at glutamatergic synapses. This calcium calmodulin-dependent protein kinaseis composed of four different chains: alpha, beta, gamma, and delta. The alpha chain encoded bythis gene is required for hippocampal long-term potentiation (LTP) and spatial learning. Inaddition to its calcium-calmodulin (CaM)-dependent activity, this protein can undergoautophosphorylation, resulting in CaM-independent activity. Two transcript variants encodingdistinct isoforms have been identified for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: KCC2A_HUMAN, Q9UQM7 Function : CaM-kinase II (CAMK2) is a prominent kinase in the central nervous system that mayfunction in long-term potentiation and neurotransmitter release. Member of the NMDAR signalingcomplex in excitatory synapses it may regulate NMDAR-dependent potentiation of the AMPAR andsynaptic plasticity (By similarity)
Gene Wiki entry for CAMK2A
Genomic Location for CAMK2A
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the CAMK2A gene Entrez Gene cytogenetic band: 5q33.1 Ensembl cytogenetic band: 5q33.1 HGNC chromosome: 5 CAMK2A Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05M149579:
(about GC identifiers )
Start:
149,579,247 bp from pter
End:
149,650,047 bp from pter
Size:
70,801 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000005.8 NT_029289.10 Proteins for CAMK2A
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: KCC2A_HUMAN, Q9UQM7 (See
protein sequence )Recommended Name: Calcium/calmodulin-dependent protein kinase type II alpha chain Size : 478 amino acids; 54030 Da
Subunit : CAMK2 is composed of four different chains: alpha, beta, gamma, and delta. The differentisoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits.Interacts with BAALC, MPDZ, SYN1, CAMK2N2 and SYNGAP1 (By similarity)
Subcellular location : Cell junction, synapse, presynaptic cell membrane (By similarity). Celljunction, synapse (By similarity). Note=Postsynaptic lipid rafts (By similarity)
PDB structures from and Proteopedia : 2VZ6 (3D)
 
Secondary accessions : Q9UL21 Q9Y2H4 Q9Y352Alternative splicing : 2 isoforms : Q9UQM7-1 Q9UQM7-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_057065.2 NP_741960.1 ENSEMBL proteins: ENSP00000381412 ENSP00000261793 ENSP00000305090 ENSP00000381411 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): CAMK2A 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for CAMK2A: Assays for CAMK2A:
Protein
Domains/ Families for CAMK2A(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UQM7 ProtoNet protein and cluster: Q9UQM7
1 Blocks protein family : IPB013543 Calcium/calmodulin dependent protein kinase II UniProtKB/Swiss-Prot: KCC2A_HUMAN, Q9UQM7 Similarity : Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMKsubfamily Similarity : Contains 1 protein kinase domain
Gene Function for CAMK2A
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_171825 Applied Biosystems Silencer ® siRNAs for CAMK2A Sigma-Aldrich siRNA and siRNA Panels for CAMK2A Sigma-Aldrich shRNA Panels and shRNA for CAMK2A Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_015981                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_015981                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_015981  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_015981 UniProtKB/Swiss-Prot: KCC2A_HUMAN, Q9UQM7 Function : CaM-kinase II (CAMK2) is a prominent kinase in the central nervous system that mayfunction in long-term potentiation and neurotransmitter release. Member of the NMDAR signalingcomplex in excitatory synapses it may regulate NMDAR-dependent potentiation of the AMPAR andsynaptic plasticity (By similarity) Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Autophosphorylation of Thr-286 allows the kinase to switch from acalmodulin-dependent to a calmodulin-independent state (By similarity) Enzyme Number (IUBMB): EC 2.7.11.17
4 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Camk2a) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
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Pathways & Interactions for CAMK2A
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/16 Sigma-Aldrich "Your Favorite Gene" Pathways for CAMK2A (Your Favorite Gene powered by Ingenuity) (see all 16
) 5/62 Interacting proteins for CAMK2A (Q9UQM7 1 , 2 ENSP00000305090 3 ) via UniProtKB, MINT, and/or STRING (see all 62
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
GO ID Qualified GO term Evidence PubMed IDs GO:0000082 G1/S transition of mitotic cell cycle
IEA -- GO:0006816 calcium ion transport
IEA -- GO:0046777 protein amino acid autophosphorylation
IEA -- GO:0046928 regulation of neurotransmitter secretion
IEA -- GO:0048168 regulation of neuronal synaptic plasticity
IEA --
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Drugs & Compounds for CAMK2A (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for CAMK2A
Sigma-Aldrich Small Molecules for CAMK2A:Antagonist
Compounds for CAMK2A available from Tocris Bioscience Compound Action
CAS
number KN-62 Non-competitive P2X7 antagonist [127191-97-3] KN-93 CaM kinase II inhibitor. Also K+ channel blocker (KV) [139298-40-1] Autocamtide-2-related inhibitory peptide Selective CaM kinase II inhibitor [167114-91-2] Arcyriaflavin A Potent cdk4/cyclin D1 and CaM Kinase II inhibitor. Antiviral agent (anti-HCMV) [118458-54-1]
About this table 3 Novoseek chemical compound relationships for CAMK2A gene
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Transcripts for CAMK2A(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_171825 Sigma-Aldrich siRNA and siRNA Panels for CAMK2A Sigma-Aldrich shRNA Panels and shRNA for CAMK2A Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_015981 NM_171825
REFSEQ mRNAs for CAMK2A gene (2 alternative transcripts): NM_015981.3 NM_171825.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_015981 NM_171825
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_015981                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_015981                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_015981  
Additional cDNA sequence: AB023185.1 AF091486.1 AF145710.1 AF145711.1 AK289776.1 AK308853.1 AY429524.1 BC040457.1 BC114359.1 CR612614.1 CR613519.1
8 DOTS entries : DT.75101681 DT.92434464 DT.120799253 DT.120799251 DT.120799245 DT.92434462 DT.120799383 DT.95374686
24/101 AceView cDNA sequences (see all 101
):AA358854 NM_171825 AW899403 CR613519 AW899421 AF091486 BE699884 AA410892 NM_015981 AY429524 CR612614 AL119079 AL520649 AW297106 BM545485 BM805444 BG699401 AI039803 AL520283 BE700157 BI545062 AB023185 BX349890 AA419536
highest scoring ESTs for CAMK2A :AB023185 AF091486 AF145710 AF145711 AL120516 BC040457 BF943763 BG699401 BI545062 BI545648
Unigene Cluster for CAMK2A: Calcium/calmodulin-dependent protein kinase II alpha Hs.716391 [show with all ESTs ] Unigene Representative Sequence: NM_015981 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for CAMK2A (see all 7
) ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b · 9c ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ SP1 :             -   -                           -     -         SP2 :             -   -                           -             SP3 :                                                     SP4 :   -   -         -   -                                       SP5 :             -   -   -                                    
ExUns: 20 ^ 21 SP1 :     SP2 :     SP3 :     SP4 :     SP5 :    
About this scheme ECgene alternative splicing isoforms for CAMK2A 4 Ensembl transcripts including schematic representations : ENST00000398376
ENST00000348628
ENST00000351010
ENST00000398374
Expression for CAMK2A
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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CAMK2A expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for CAMK2A 1 / 2 / 3
5 probe-sets matching CAMK2A gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTGCGAATCCSOURCE GeneReport for Unigene cluster: Hs.716391 Expression variation in blood from EXPOLDB for CAMK2A
Orthologs for CAMK2A
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for CAMK2A gene from 5/11 species (see all 11
)
About this table Species with no ortholog for CAMK2A ENSEMBL Gene Tree for CAMK2A Paralogs for CAMK2A (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for CAMK2A gene PHKG2 2 PHKG1 2
SNPs/Variants for CAMK2A (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for CAMK2A (up to first 250kb)
Disorders & Mutations for CAMK2A
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 114078 Human Genome Epidemiology Navigator: CAMK2A (2 documents)
Medical News for CAMK2A (Possibly Related Articles in
Doctor's Guide )
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--
Publications for CAMK2A (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/123 PubMed articles for CAMK2A gene (see all 123
):
Search for CAMK2A
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CAMK2A
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing CAMK2A
(According to HUGE )
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Specialized Databases showing CAMK2A (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for CAMK2A (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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