Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CALR4P Gene

Aliases for CALR4P Gene

  • Calreticulin 4, Pseudogene 2 3

External Ids for CALR4P Gene

Previous GeneCards Identifiers for CALR4P Gene

  • GC01M052016
  • GC01P052020

Summaries for CALR4P Gene

GeneCards Summary for CALR4P Gene

CALR4P (Calreticulin 4, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CALR4P Gene

Genomics for CALR4P Gene

Genomic Location for CALR4P Gene

Start:
51,554,728 bp from pter
End:
51,594,897 bp from pter
Size:
40,170 bases
Orientation:
Minus strand

Genomic View for CALR4P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CALR4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CALR4P Gene

No data available for Regulatory Elements for CALR4P Gene

Proteins for CALR4P Gene

Post-translational modifications for CALR4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CALR4P Gene

Domains for CALR4P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CALR4P Gene

Function for CALR4P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CALR4P Gene

Localization for CALR4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CALR4P Gene

Pathways for CALR4P Gene

SuperPathways for CALR4P Gene

No Data Available

Interacting Proteins for CALR4P Gene

Gene Ontology (GO) - Biological Process for CALR4P Gene

None

No data available for Pathways by source for CALR4P Gene

Transcripts for CALR4P Gene

mRNA/cDNA for CALR4P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CALR4P Gene

No ASD Table

Relevant External Links for CALR4P Gene

GeneLoc Exon Structure for
CALR4P
ECgene alternative splicing isoforms for
CALR4P

Expression for CALR4P Gene

mRNA expression in normal human tissues for CALR4P Gene

mRNA differential expression in normal tissues according to GTEx for CALR4P Gene

This gene is overexpressed in Adrenal Gland (18.5) and Testis (7.4).
genes like me logo Genes that share expressions with CALR4P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CALR4P Gene

Orthologs for CALR4P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for CALR4P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Calr4 16
Species with no ortholog for CALR4P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CALR4P Gene

ENSEMBL:
Gene Tree for CALR4P (if available)
TreeFam:
Gene Tree for CALR4P (if available)

Paralogs for CALR4P Gene

No data available for Paralogs for CALR4P Gene

Variants for CALR4P Gene

Relevant External Links for CALR4P Gene

HapMap Linkage Disequilibrium report
CALR4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for CALR4P Gene

Disorders for CALR4P Gene

No disorders were found for CALR4P Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CALR4P Gene

Publications for CALR4P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3

Products for CALR4P Gene

Sources for CALR4P Gene

Back to Top

Content