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Aliases for CALR4P Gene

Aliases for CALR4P Gene

  • Calreticulin 4, Pseudogene 2 3 5

External Ids for CALR4P Gene

Previous GeneCards Identifiers for CALR4P Gene

  • GC01M052016
  • GC01P052020

Summaries for CALR4P Gene

GeneCards Summary for CALR4P Gene

CALR4P (Calreticulin 4, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CALR4P Gene

Genomics for CALR4P Gene

Regulatory Elements for CALR4P Gene

Enhancers for CALR4P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G051563 1.7 Ensembl ENCODE dbSUPER 8 +26.9 26880 9.3 CREB3L1 MLX AGO1 DMAP1 YY1 SLC30A9 NFYC ZFP41 ZNF610 GLIS1 NRDC ZCCHC11 RNU6-1281P ENSG00000266993 ENSG00000227070 EPS15 KTI12 RNU6-877P CALR4P OSBPL9
GH01G051557 1.3 Ensembl ENCODE dbSUPER 7.7 +36.4 36398 2.3 NFIB JUN ZSCAN4 FOXM1 CTBP1 ZNF316 GATA3 GATA2 EGR1 RCOR1 CALR4P GC01P051545 OSBPL9
GH01G051583 0.8 Ensembl ENCODE 11.2 +11.1 11136 1.2 JUND CEBPA CEBPB CEBPG ZNF24 RAD21 CALR4P GC01P051592 OSBPL9
GH01G051534 1.3 Ensembl ENCODE dbSUPER 6.1 +59.9 59880 1.4 TBL1XR1 RB1 ARNT ZNF2 RAD21 CHAMP1 RFX5 ZNF143 CREM ZNF654 EPS15 CALR4P RNU6-1281P GC01P051530
GH01G051521 0.9 dbSUPER 6 +70.9 70897 4.3 PKNOX1 RB1 ZSCAN4 ZNF335 GATA2 SCRT2 EGR2 SP3 GATAD2B ZNF398 EPS15 CALR4P GC01P051530
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CALR4P on UCSC Golden Path with GeneCards custom track

Genomic Location for CALR4P Gene

Chromosome:
1
Start:
51,554,728 bp from pter
End:
51,594,897 bp from pter
Size:
40,170 bases
Orientation:
Minus strand

Genomic View for CALR4P Gene

Genes around CALR4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CALR4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CALR4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CALR4P Gene

Proteins for CALR4P Gene

Post-translational modifications for CALR4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CALR4P Gene

Domains & Families for CALR4P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CALR4P Gene

Function for CALR4P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CALR4P Gene

Localization for CALR4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CALR4P Gene

Pathways & Interactions for CALR4P Gene

SuperPathways for CALR4P Gene

No Data Available

Interacting Proteins for CALR4P Gene

Gene Ontology (GO) - Biological Process for CALR4P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CALR4P Gene

Drugs & Compounds for CALR4P Gene

No Compound Related Data Available

Transcripts for CALR4P Gene

mRNA/cDNA for CALR4P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CALR4P Gene

No ASD Table

Relevant External Links for CALR4P Gene

GeneLoc Exon Structure for
CALR4P
ECgene alternative splicing isoforms for
CALR4P

Expression for CALR4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CALR4P Gene

mRNA differential expression in normal tissues according to GTEx for CALR4P Gene

This gene is overexpressed in Adrenal Gland (x18.5) and Testis (x7.4).

NURSA nuclear receptor signaling pathways regulating expression of CALR4P Gene:

CALR4P
genes like me logo Genes that share expression patterns with CALR4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CALR4P Gene

Orthologs for CALR4P Gene

Evolution for CALR4P Gene

ENSEMBL:
Gene Tree for CALR4P (if available)
TreeFam:
Gene Tree for CALR4P (if available)

No data available for Orthologs for CALR4P Gene

Paralogs for CALR4P Gene

No data available for Paralogs for CALR4P Gene

Variants for CALR4P Gene

Relevant External Links for CALR4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CALR4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CALR4P Gene

Disorders for CALR4P Gene

No disorders were found for CALR4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CALR4P Gene

Publications for CALR4P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3 64

Products for CALR4P Gene

Sources for CALR4P Gene

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