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Aliases for CALCP Gene

Aliases for CALCP Gene

  • Calcitonin Pseudogene 2 3 5
  • CALC3 3

External Ids for CALCP Gene

Previous GeneCards Identifiers for CALCP Gene

  • GC11U990015
  • GC11P014893
  • GC11P014885
  • GC11P014611

Summaries for CALCP Gene

GeneCards Summary for CALCP Gene

CALCP (Calcitonin Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CALCP Gene

Genomics for CALCP Gene

Regulatory Elements for CALCP Gene

Enhancers for CALCP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G014635 1.2 Ensembl ENCODE 10.2 -271.3 -271254 1.1 PKNOX1 ARNT TCF12 ZNF766 GATA2 NCOA1 ZNF592 MBD2 SMARCA4 MYNN CALCB CALCP CYP2R1 PSMA1 PIR39085
GH11G014638 0.5 dbSUPER 10.1 -267.8 -267757 2.3 NFIC NFIB ZBTB33 ZNF24 RAD21 CALCB CALCP COPB1 PSMA1 PIR39085
GH11G014783 0.4 ENCODE 12 -123.2 -123213 0.9 ZBTB33 CALCB CALCP SPON1 GC11P014892 MORF4L1P3
GH11G014907 1.2 Ensembl ENCODE 0.7 +0.3 300 0.8 FOXA2 NFIB ARID4B ZNF2 ZNF48 RAD21 CHAMP1 SCRT2 ZNF143 PCBP1 CALCP GC11M014875
GH11G014904 0.8 ENCODE 0.7 -2.1 -2127 1.7 CTCF MAX RBBP5 EBF1 RAD21 YY1 FOXM1 POLR2A EED ZNF143 CALCB CALCP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CALCP on UCSC Golden Path with GeneCards custom track

Genomic Location for CALCP Gene

Chromosome:
11
Start:
14,907,499 bp from pter
End:
14,907,999 bp from pter
Size:
501 bases
Orientation:
Plus strand

Genomic View for CALCP Gene

Genes around CALCP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CALCP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CALCP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CALCP Gene

Proteins for CALCP Gene

Post-translational modifications for CALCP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CALCP Gene

Domains & Families for CALCP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CALCP Gene

Function for CALCP Gene

Molecular function for CALCP Gene

GENATLAS Biochemistry:
calcitonin pseudogene

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CALCP Gene

Localization for CALCP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CALCP Gene

Pathways & Interactions for CALCP Gene

SuperPathways for CALCP Gene

No Data Available

Interacting Proteins for CALCP Gene

Gene Ontology (GO) - Biological Process for CALCP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CALCP Gene

Drugs & Compounds for CALCP Gene

No Compound Related Data Available

Transcripts for CALCP Gene

mRNA/cDNA for CALCP Gene

(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CALCP Gene

No ASD Table

Relevant External Links for CALCP Gene

GeneLoc Exon Structure for
CALCP
ECgene alternative splicing isoforms for
CALCP

Expression for CALCP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CALCP Gene

NURSA nuclear receptor signaling pathways regulating expression of CALCP Gene:

CALCP
genes like me logo Genes that share expression patterns with CALCP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CALCP Gene

Orthologs for CALCP Gene

Evolution for CALCP Gene

ENSEMBL:
Gene Tree for CALCP (if available)
TreeFam:
Gene Tree for CALCP (if available)

No data available for Orthologs for CALCP Gene

Paralogs for CALCP Gene

No data available for Paralogs for CALCP Gene

Variants for CALCP Gene

Relevant External Links for CALCP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CALCP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CALCP Gene

Disorders for CALCP Gene

No disorders were found for CALCP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CALCP Gene

Publications for CALCP Gene

  1. A third human CALC (pseudo)gene on chromosome 11. (PMID: 2898385) HAPppener J.W. … Jansz H.S. (FEBS Lett. 1988) 2 3 64
  2. Genome-wide association study of vitamin D levels in children: replication in the Western Australian Pregnancy Cohort (Raine) study. (PMID: 25208829) Anderson D. … Blackwell J.M. (Genes Immun. 2014) 3 64
  3. High-resolution chromosomal localization of the human calcitonin/CGRP/IAPP gene family members. (PMID: 8468047) Hoovers J.M. … Mannens M. (Genomics 1993) 3 64

Products for CALCP Gene

Sources for CALCP Gene

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