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Aliases for CACNA1G-AS1 Gene

Subcategory (RNA class) for CACNA1G-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CACNA1G-AS1 Gene

  • CACNA1G Antisense RNA 1 2 3 5
  • CACNA1G Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CACNA1G-AS1 Gene

Previous GeneCards Identifiers for CACNA1G-AS1 Gene

  • GC17M048635

Summaries for CACNA1G-AS1 Gene

GeneCards Summary for CACNA1G-AS1 Gene

CACNA1G-AS1 (CACNA1G Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with CACNA1G-AS1 include Retinitis Pigmentosa 11.

Additional gene information for CACNA1G-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1G-AS1 Gene

Genomics for CACNA1G-AS1 Gene

Regulatory Elements for CACNA1G-AS1 Gene

Enhancers for CACNA1G-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H050532 1.5 Ensembl ENCODE dbSUPER 22.7 +28.1 28093 3.8 ARID4B SIN3A GLI4 ZBTB7B GLIS2 ELK1 FOS SP3 ZNF592 WT1 EPN3 SPATA20 CACNA1G-AS1 MYCBPAP CACNA1G KAT7 LOC105371824
GH17H050395 1.2 ENCODE 22.1 +165.3 165298 2.7 MLX DMAP1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 GLIS1 RCOR2 ENSG00000262837 MBTD1 LOC105371824 LUC7L3 UTP18 CACNA1G-AS1 FLJ45513 FAM117A KAT7 XYLT2
GH17H050371 1.2 ENCODE 21.8 +189.5 189490 2.7 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 LUC7L3 MBTD1 CACNA1G-AS1 ENSG00000262837 KAT7 MRPL27 XYLT2 NXPH3 SAMD14 EME1
GH17H049735 2.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 9.9 +818.9 818891 15.6 HNRNPUL1 HDGF PKNOX1 ARNT SIN3A FEZF1 YY1 ZNF766 ZNF143 FOS ENSG00000262837 LUC7L3 UBE2Z FAM117A KAT7 FLJ45513 NXPH3 ZNF652 ENSG00000230532 SLC35B1
GH17H049758 1.9 VISTA Ensembl ENCODE dbSUPER 10.4 +800.2 800159 6.4 HDGF PKNOX1 ARNT ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF207 FOS ENSG00000262837 UBE2Z LUC7L3 FAM117A FLJ45513 SPOP COL1A1 TAC4 SLC35B1 ITGA3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CACNA1G-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for CACNA1G-AS1 Gene

Genomic Locations for CACNA1G-AS1 Gene
5,902 bases
Minus strand

Genomic View for CACNA1G-AS1 Gene

Genes around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1G-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1G-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CACNA1G-AS1 Gene

Proteins for CACNA1G-AS1 Gene

Post-translational modifications for CACNA1G-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1G-AS1 Gene

Domains & Families for CACNA1G-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1G-AS1 Gene

Function for CACNA1G-AS1 Gene

Phenotypes From GWAS Catalog for CACNA1G-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1G-AS1 Gene

Localization for CACNA1G-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CACNA1G-AS1 Gene

Pathways & Interactions for CACNA1G-AS1 Gene

SuperPathways for CACNA1G-AS1 Gene

No Data Available

Interacting Proteins for CACNA1G-AS1 Gene

Gene Ontology (GO) - Biological Process for CACNA1G-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CACNA1G-AS1 Gene

Drugs & Compounds for CACNA1G-AS1 Gene

No Compound Related Data Available

Transcripts for CACNA1G-AS1 Gene

mRNA/cDNA for CACNA1G-AS1 Gene

(2) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CACNA1G-AS1 Gene

CACNA1G antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1G-AS1 Gene

No ASD Table

Relevant External Links for CACNA1G-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CACNA1G-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1G-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CACNA1G-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x5.5) and Cervix - Ectocervix (x4.4).

SOURCE GeneReport for Unigene cluster for CACNA1G-AS1 Gene:

genes like me logo Genes that share expression patterns with CACNA1G-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1G-AS1 Gene

Orthologs for CACNA1G-AS1 Gene

Evolution for CACNA1G-AS1 Gene

Gene Tree for CACNA1G-AS1 (if available)
Gene Tree for CACNA1G-AS1 (if available)

No data available for Orthologs for CACNA1G-AS1 Gene

Paralogs for CACNA1G-AS1 Gene

No data available for Paralogs for CACNA1G-AS1 Gene

Variants for CACNA1G-AS1 Gene

Sequence variations from dbSNP and Humsavar for CACNA1G-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000075862 -- 50,558,945(+) GCACT(G/T)AGGGG intron-variant, upstream-variant-2KB
rs1000243800 -- 50,560,003(+) AATTG(A/T)CTCGG intron-variant, upstream-variant-2KB
rs1000296300 -- 50,559,815(+) CCCTC(C/T)TGGGG intron-variant, upstream-variant-2KB
rs1000630212 -- 50,558,644(+) GTGGG(A/G)CCTGC intron-variant
rs1000899720 -- 50,563,225(+) CCCTC(A/G)TCACA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CACNA1G-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833477 CNV loss 17160897

Relevant External Links for CACNA1G-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CACNA1G-AS1 Gene

Disorders for CACNA1G-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CACNA1G-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
retinitis pigmentosa 11
  • rp11
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for CACNA1G-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with CACNA1G-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CACNA1G-AS1 Gene

Publications for CACNA1G-AS1 Gene

  1. Identification of skin-related lncRNAs as potential biomarkers that involved in Wnt pathways in keloids. (PMID: 28404955) Sun XJ … Wang B (Oncotarget 2017) 2 3 60
  2. LncRNA expression profiles and validation in keloid and normal skin tissue. (PMID: 26397149) Liang X … Wang X (International journal of oncology 2015) 2 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for CACNA1G-AS1 Gene

Sources for CACNA1G-AS1 Gene

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