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Aliases for CACNA1G-AS1 Gene

Subcategory (RNA class) for CACNA1G-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CACNA1G-AS1 Gene

  • CACNA1G Antisense RNA 1 2 3 5
  • CACNA1G Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CACNA1G-AS1 Gene

Previous GeneCards Identifiers for CACNA1G-AS1 Gene

  • GC17M048635

Summaries for CACNA1G-AS1 Gene

GeneCards Summary for CACNA1G-AS1 Gene

CACNA1G-AS1 (CACNA1G Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1G-AS1 Gene

Genomics for CACNA1G-AS1 Gene

Regulatory Elements for CACNA1G-AS1 Gene

Enhancers for CACNA1G-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F050861 1.2 ENCODE 23.5 -303.0 -303035 8.5 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF263 SP3 NFYC MEF2D CACNA1G-AS1 LOC105371824 LOC105371827 ENSG00000206824 ENSG00000249658 LINC02071 TOB1-AS1 ENSG00000247011 ENSG00000251665 WFIKKN2
GH17F050531 1 Ensembl ENCODE 23 +28.4 28362 4.3 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 ZNF143 FOS ZNF263 SP3 NFYC EPN3 SPATA20 CACNA1G-AS1 MYCBPAP CACNA1G KAT7 LOC105371824
GH17F050395 0.5 ENCODE 21.8 +165.3 165298 2.7 CREB3L1 MLX DMAP1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 SSRP1 ENSG00000262837 CACNA1G-AS1 LOC105371824 FLJ45513 FAM117A COL1A1 XYLT2 LOC284080 NXPH3 EME1
GH17F049674 0.4 ENCODE 21.8 +885.4 885422 4.1 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A YBX1 DMAP1 CACNA1G-AS1 LOC105371824 ENSG00000250751 SLC35B1 ENSG00000250310 ENSG00000230532 PHB RPL21P124 ENSG00000250186 SPOP
GH17F050631 1 FANTOM5 Ensembl ENCODE 12.8 -70.6 -70620 2.3 BCOR TBP ZMYM3 EBF1 RELA ZFHX2 GATA3 POLR2A ZNF600 EGR2 CACNA1G-AS1 ABCC3 PPP1R9B LOC101927253
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CACNA1G-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for CACNA1G-AS1 Gene

50,556,207 bp from pter
50,562,108 bp from pter
5,902 bases
Minus strand

Genomic View for CACNA1G-AS1 Gene

Genes around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1G-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1G-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CACNA1G-AS1 Gene

Proteins for CACNA1G-AS1 Gene

Post-translational modifications for CACNA1G-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1G-AS1 Gene

Domains & Families for CACNA1G-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1G-AS1 Gene

Function for CACNA1G-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1G-AS1 Gene

Localization for CACNA1G-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CACNA1G-AS1 Gene

Pathways & Interactions for CACNA1G-AS1 Gene

SuperPathways for CACNA1G-AS1 Gene

No Data Available

Interacting Proteins for CACNA1G-AS1 Gene

Gene Ontology (GO) - Biological Process for CACNA1G-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CACNA1G-AS1 Gene

Transcripts for CACNA1G-AS1 Gene

mRNA/cDNA for CACNA1G-AS1 Gene

(2) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CACNA1G-AS1 Gene

CACNA1G antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1G-AS1 Gene

No ASD Table

Relevant External Links for CACNA1G-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CACNA1G-AS1 Gene

mRNA expression in normal human tissues for CACNA1G-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CACNA1G-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x5.5) and Cervix - Ectocervix (x4.4).

SOURCE GeneReport for Unigene cluster for CACNA1G-AS1 Gene:

genes like me logo Genes that share expression patterns with CACNA1G-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CACNA1G-AS1 Gene

Orthologs for CACNA1G-AS1 Gene

Evolution for CACNA1G-AS1 Gene

Gene Tree for CACNA1G-AS1 (if available)
Gene Tree for CACNA1G-AS1 (if available)

No data available for Orthologs for CACNA1G-AS1 Gene

Paralogs for CACNA1G-AS1 Gene

No data available for Paralogs for CACNA1G-AS1 Gene

Variants for CACNA1G-AS1 Gene

Sequence variations from dbSNP and Humsavar for CACNA1G-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs111418828 -- 50,563,058(+) TTGTA(A/G)CCCCT intron-variant, upstream-variant-2KB
rs111455206 -- 50,559,852(+) CTGCC(C/T)GGGGC intron-variant, upstream-variant-2KB
rs111793248 -- 50,557,674(+) GACAG(A/G)GCCAT intron-variant
rs112692320 -- 50,561,288(+) GCATG(A/C)CCCTG intron-variant, nc-transcript-variant, utr-variant-5-prime
rs112792872 -- 50,561,826(+) GGATG(-/A)GGGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CACNA1G-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833477 CNV loss 17160897

Relevant External Links for CACNA1G-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CACNA1G-AS1 Gene

Disorders for CACNA1G-AS1 Gene

Relevant External Links for CACNA1G-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CACNA1G-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CACNA1G-AS1 Gene

Publications for CACNA1G-AS1 Gene

  1. LncRNA expression profiles and validation in keloid and normal skin tissue. (PMID: 26397149) Liang X. … Wang X. (Int. J. Oncol. 2015) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for CACNA1G-AS1 Gene

Sources for CACNA1G-AS1 Gene

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