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Aliases for CACNA1G-AS1 Gene

Subcategory (RNA class) for CACNA1G-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CACNA1G-AS1 Gene

  • CACNA1G Antisense RNA 1 2 3 5
  • CACNA1G Antisense RNA 1 (Non-Protein Coding) 2

External Ids for CACNA1G-AS1 Gene

Previous GeneCards Identifiers for CACNA1G-AS1 Gene

  • GC17M048635

Summaries for CACNA1G-AS1 Gene

GeneCards Summary for CACNA1G-AS1 Gene

CACNA1G-AS1 (CACNA1G Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with CACNA1G-AS1 include Retinitis Pigmentosa 11.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1G-AS1 Gene

Genomics for CACNA1G-AS1 Gene

Regulatory Elements for CACNA1G-AS1 Gene

Enhancers for CACNA1G-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G050171 2.1 FANTOM5 Ensembl ENCODE dbSUPER 30.2 +369.6 369587 42.0 CREB3L1 ZFP64 DMAP1 YBX1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 SGCA ENSG00000262837 CACNA1G-AS1 MYCBPAP LOC105371824 FLJ45513 NXPH3 TMEM92-AS1 COL1A1 TMEM92
GH17G049706 1.4 ENCODE dbSUPER 24.3 +853.9 853890 2.9 CREB3L1 MLX AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC CACNA1G-AS1 ENSG00000230532 KAT7 PPP1R9B SUMO2P17 NXPH3 PIR42611 ENSG00000250751
GH17G050862 2.5 ENCODE dbSUPER 12.7 -303.0 -303035 8.5 CREB3L1 MLX AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 TOB1-AS1 ENSG00000251665 ENSG00000247011 CACNA1G-AS1 WFIKKN2 UTP18 PPP1R9B RPL5P33
GH17G050395 1.2 ENCODE 22.7 +165.3 165298 2.7 MLX CREB3L1 DMAP1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 SSRP1 ENSG00000262837 CACNA1G-AS1 FLJ45513 FAM117A COL1A1 XYLT2 NXPH3 EME1 ANKRD40 ENSG00000253102
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for CACNA1G-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for CACNA1G-AS1 Gene

50,556,207 bp from pter
50,562,108 bp from pter
5,902 bases
Minus strand

Genomic View for CACNA1G-AS1 Gene

Genes around CACNA1G-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1G-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1G-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CACNA1G-AS1 Gene

Proteins for CACNA1G-AS1 Gene

Post-translational modifications for CACNA1G-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1G-AS1 Gene

Domains & Families for CACNA1G-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1G-AS1 Gene

Function for CACNA1G-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1G-AS1 Gene

Localization for CACNA1G-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CACNA1G-AS1 Gene

Pathways & Interactions for CACNA1G-AS1 Gene

SuperPathways for CACNA1G-AS1 Gene

No Data Available

Interacting Proteins for CACNA1G-AS1 Gene

Gene Ontology (GO) - Biological Process for CACNA1G-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CACNA1G-AS1 Gene

Drugs & Compounds for CACNA1G-AS1 Gene

No Compound Related Data Available

Transcripts for CACNA1G-AS1 Gene

mRNA/cDNA for CACNA1G-AS1 Gene

(2) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CACNA1G-AS1 Gene

CACNA1G antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1G-AS1 Gene

No ASD Table

Relevant External Links for CACNA1G-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CACNA1G-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1G-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CACNA1G-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x5.5) and Cervix - Ectocervix (x4.4).

SOURCE GeneReport for Unigene cluster for CACNA1G-AS1 Gene:

genes like me logo Genes that share expression patterns with CACNA1G-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1G-AS1 Gene

Orthologs for CACNA1G-AS1 Gene

Evolution for CACNA1G-AS1 Gene

Gene Tree for CACNA1G-AS1 (if available)
Gene Tree for CACNA1G-AS1 (if available)

No data available for Orthologs for CACNA1G-AS1 Gene

Paralogs for CACNA1G-AS1 Gene

No data available for Paralogs for CACNA1G-AS1 Gene

Variants for CACNA1G-AS1 Gene

Sequence variations from dbSNP and Humsavar for CACNA1G-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000075862 -- 50,558,945(+) GCACT(G/T)AGGGG intron-variant, upstream-variant-2KB
rs1000243800 -- 50,560,003(+) AATTG(A/T)CTCGG intron-variant, upstream-variant-2KB
rs1000296300 -- 50,559,815(+) CCCTC(C/T)TGGGG intron-variant, upstream-variant-2KB
rs1000630212 -- 50,558,644(+) GTGGG(A/G)CCTGC intron-variant
rs1000899720 -- 50,563,225(+) CCCTC(A/G)TCACA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CACNA1G-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833477 CNV loss 17160897

Relevant External Links for CACNA1G-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CACNA1G-AS1 Gene

Disorders for CACNA1G-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CACNA1G-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
retinitis pigmentosa 11
  • rp11
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for CACNA1G-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with CACNA1G-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CACNA1G-AS1 Gene

Publications for CACNA1G-AS1 Gene

  1. Identification of skin-related lncRNAs as potential biomarkers that involved in Wnt pathways in keloids. (PMID: 28404955) Sun X.J. … Wang B. (Oncotarget 2017) 2 3 64
  2. LncRNA expression profiles and validation in keloid and normal skin tissue. (PMID: 26397149) Liang X. … Wang X. (Int. J. Oncol. 2015) 2 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for CACNA1G-AS1 Gene

Sources for CACNA1G-AS1 Gene

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