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Aliases for CACNA1C-AS3 Gene

Subcategory (RNA class) for CACNA1C-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CACNA1C-AS3 Gene

  • CACNA1C Antisense RNA 3 2 3 5
  • CACNA1C Antisense RNA 3 (Non-Protein Coding) 2

External Ids for CACNA1C-AS3 Gene

Previous GeneCards Identifiers for CACNA1C-AS3 Gene

  • GC00U933206
  • GC12M002713

Summaries for CACNA1C-AS3 Gene

GeneCards Summary for CACNA1C-AS3 Gene

CACNA1C-AS3 (CACNA1C Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CACNA1C-AS3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1C-AS3 Gene

Genomics for CACNA1C-AS3 Gene

Regulatory Elements for CACNA1C-AS3 Gene

Enhancers for CACNA1C-AS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H001658 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +946.2 946155 5.3 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF416 FOS RAD52 ADIPOR2 DCP1B CACNA1C-AS3 CACNA1C-IT3 CACNA2D4 ENSG00000256706 LRTM2 MIR3649
GH12H001924 1.3 ENCODE dbSUPER 14.6 +682.6 682630 0.8 ZNF133 FEZF1 GLI4 ZNF121 ZNF302 ZNF416 ZNF548 YY2 TSHZ1 ZNF488 ITFG2 TULP3 RAD52 DCP1B CBX3P4 ENSG00000250132 CACNA1C-AS3 CACNA1C-IT3 ITFG2-AS1 LRTM2
GH12H002811 1.2 ENCODE 14.6 -205.7 -205698 3 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 DCP1B TULP3 ITFG2 CACNA1C-AS3 ENSG00000256691 RPS26P44 CACNA1C-IT3 NRIP2 ENSG00000256150
GH12H002256 1.2 ENCODE dbSUPER 14.6 +350.7 350742 1.6 ZNF133 GLI4 TCF12 ZNF121 ZNF302 ZNF416 ZNF202 YY2 ZNF488 ZFP41 ITFG2 TULP3 DCP1B CBX3P4 IQSEC3P1 RPS27P3 CACNA1C-IT3 CACNA1C-AS3 ITFG2-AS1 CACNA1C-AS4
GH12H002582 1 Ensembl ENCODE 11.7 +24.2 24196 0.9 CTCF ESRRA RB1 SUZ12 KLF17 ZIC2 RAD21 CTBP1 SMC3 ZNF143 CACNA1C-AS3 CACNA1C CACNA1C-AS4 PIR40542
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CACNA1C-AS3 Gene

Genomic Locations for CACNA1C-AS3 Gene
chr12:2,603,350-2,607,440
(GRCh38/hg38)
Size:
4,091 bases
Orientation:
Minus strand
chr12:2,712,516-2,716,606
(GRCh37/hg19)

Genomic View for CACNA1C-AS3 Gene

Genes around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1C-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1C-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CACNA1C-AS3 Gene

Proteins for CACNA1C-AS3 Gene

Post-translational modifications for CACNA1C-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1C-AS3 Gene

Domains & Families for CACNA1C-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1C-AS3 Gene

Function for CACNA1C-AS3 Gene

Phenotypes From GWAS Catalog for CACNA1C-AS3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1C-AS3 Gene

Localization for CACNA1C-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CACNA1C-AS3 Gene

Pathways & Interactions for CACNA1C-AS3 Gene

SuperPathways for CACNA1C-AS3 Gene

No Data Available

Interacting Proteins for CACNA1C-AS3 Gene

Gene Ontology (GO) - Biological Process for CACNA1C-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CACNA1C-AS3 Gene

Drugs & Compounds for CACNA1C-AS3 Gene

No Compound Related Data Available

Transcripts for CACNA1C-AS3 Gene

mRNA/cDNA for CACNA1C-AS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1C-AS3 Gene

No ASD Table

Relevant External Links for CACNA1C-AS3 Gene

GeneLoc Exon Structure for
CACNA1C-AS3
ECgene alternative splicing isoforms for
CACNA1C-AS3

Expression for CACNA1C-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1C-AS3 Gene

genes like me logo Genes that share expression patterns with CACNA1C-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1C-AS3 Gene

Orthologs for CACNA1C-AS3 Gene

Evolution for CACNA1C-AS3 Gene

ENSEMBL:
Gene Tree for CACNA1C-AS3 (if available)
TreeFam:
Gene Tree for CACNA1C-AS3 (if available)

No data available for Orthologs for CACNA1C-AS3 Gene

Paralogs for CACNA1C-AS3 Gene

No data available for Paralogs for CACNA1C-AS3 Gene

Variants for CACNA1C-AS3 Gene

Relevant External Links for CACNA1C-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CACNA1C-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CACNA1C-AS3 Gene

Disorders for CACNA1C-AS3 Gene

No disorders were found for CACNA1C-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CACNA1C-AS3 Gene

Publications for CACNA1C-AS3 Gene

No publications were found for CACNA1C-AS3 Gene.

Products for CACNA1C-AS3 Gene

Sources for CACNA1C-AS3 Gene

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