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Aliases for CACNA1C-AS3 Gene

Subcategory (RNA class) for CACNA1C-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CACNA1C-AS3 Gene

  • CACNA1C Antisense RNA 3 2 3 5
  • CACNA1C Antisense RNA 3 (Non-Protein Coding) 2

External Ids for CACNA1C-AS3 Gene

Previous GeneCards Identifiers for CACNA1C-AS3 Gene

  • GC00U933206
  • GC12M002713

Summaries for CACNA1C-AS3 Gene

GeneCards Summary for CACNA1C-AS3 Gene

CACNA1C-AS3 (CACNA1C Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1C-AS3 Gene

Genomics for CACNA1C-AS3 Gene

Regulatory Elements for CACNA1C-AS3 Gene

Enhancers for CACNA1C-AS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G002582 1.1 Ensembl ENCODE 11.7 +24.2 24196 0.9 CTCF ESRRA RB1 SUZ12 KLF17 UBTF ZIC2 RAD21 ZNF335 POLR2A CACNA1C-AS3 CACNA1C CACNA1C-AS4 PIR40542
GH12G002615 1.2 FANTOM5 Ensembl ENCODE 0.4 -8.8 -8788 1.3 ZBTB21 ZIC2 ZFHX2 GLIS2 POLR2A FOS NFE2L2 EGR2 BHLHE40 ZNF398 CACNA1C-AS3 RPS6P18
GH12G002612 0.9 Ensembl ENCODE 0.4 -6.3 -6300 2.3 BHLHE40 SIN3A TSHZ1 ZEB2 ZIC2 JUND ZNF629 SCRT2 ZNF600 ZNF24 CACNA1C-AS3 RPS6P18
GH12G002639 1 Ensembl ENCODE 0.3 -33.3 -33349 1.8 CTCF PKNOX1 JUN SIN3A ZIC2 RAD21 FOSL1 ZFHX2 POLR2A GATA2 RPS6P18 CACNA1C-AS3
GH12G002624 0.7 ENCODE 0.4 -17.5 -17470 1.5 CTCF MAFG DPF2 RAD21 NR2F2 GATA3 ZNF316 SMC3 FOSL2 FOS CBX3P4 FKBP4 ITFG2 CACNA1C-AS3 RPS6P18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Location for CACNA1C-AS3 Gene

Chromosome:
12
Start:
2,603,350 bp from pter
End:
2,607,440 bp from pter
Size:
4,091 bases
Orientation:
Minus strand

Genomic View for CACNA1C-AS3 Gene

Genes around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1C-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1C-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CACNA1C-AS3 Gene

Proteins for CACNA1C-AS3 Gene

Post-translational modifications for CACNA1C-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1C-AS3 Gene

Domains & Families for CACNA1C-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1C-AS3 Gene

Function for CACNA1C-AS3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1C-AS3 Gene

Localization for CACNA1C-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CACNA1C-AS3 Gene

Pathways & Interactions for CACNA1C-AS3 Gene

SuperPathways for CACNA1C-AS3 Gene

No Data Available

Interacting Proteins for CACNA1C-AS3 Gene

Gene Ontology (GO) - Biological Process for CACNA1C-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CACNA1C-AS3 Gene

Transcripts for CACNA1C-AS3 Gene

mRNA/cDNA for CACNA1C-AS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1C-AS3 Gene

No ASD Table

Relevant External Links for CACNA1C-AS3 Gene

GeneLoc Exon Structure for
CACNA1C-AS3
ECgene alternative splicing isoforms for
CACNA1C-AS3

Expression for CACNA1C-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1C-AS3 Gene

genes like me logo Genes that share expression patterns with CACNA1C-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1C-AS3 Gene

Orthologs for CACNA1C-AS3 Gene

Evolution for CACNA1C-AS3 Gene

ENSEMBL:
Gene Tree for CACNA1C-AS3 (if available)
TreeFam:
Gene Tree for CACNA1C-AS3 (if available)

No data available for Orthologs for CACNA1C-AS3 Gene

Paralogs for CACNA1C-AS3 Gene

No data available for Paralogs for CACNA1C-AS3 Gene

Variants for CACNA1C-AS3 Gene

Relevant External Links for CACNA1C-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CACNA1C-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CACNA1C-AS3 Gene

Disorders for CACNA1C-AS3 Gene

No disorders were found for CACNA1C-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CACNA1C-AS3 Gene

Publications for CACNA1C-AS3 Gene

No publications were found for CACNA1C-AS3 Gene.

Products for CACNA1C-AS3 Gene

Sources for CACNA1C-AS3 Gene

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