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Aliases for CACNA1C-AS3 Gene

Subcategory (RNA class) for CACNA1C-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CACNA1C-AS3 Gene

  • CACNA1C Antisense RNA 3 2 3 5
  • CACNA1C Antisense RNA 3 (Non-Protein Coding) 2

External Ids for CACNA1C-AS3 Gene

Previous GeneCards Identifiers for CACNA1C-AS3 Gene

  • GC00U933206
  • GC12M002713

Summaries for CACNA1C-AS3 Gene

GeneCards Summary for CACNA1C-AS3 Gene

CACNA1C-AS3 (CACNA1C Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CACNA1C-AS3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1C-AS3 Gene

Genomics for CACNA1C-AS3 Gene

GeneHancer (GH) Regulatory Elements for CACNA1C-AS3 Gene

Promoters and enhancers for CACNA1C-AS3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I002582 Enhancer 0.9 Ensembl ENCODE 11.7 +24.2 24195 0.9 CTCF ESRRA RB1 SUZ12 KLF17 ZIC2 RAD21 CTBP1 SMC3 ZNF143 CACNA1C-AS3 CACNA1C CACNA1C-AS4 PIR40542
GH12I002615 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -8.8 -8788 1.3 ZBTB21 ZNF398 ZIC2 ATF2 NR2F2 OSR2 ZFHX2 GLIS2 POLR2A GLIS1 CACNA1C-AS3 RPS6P18 CACNA1C
GH12I002612 Enhancer 0.8 Ensembl ENCODE 0.4 -6.3 -6300 2.3 TSHZ1 ZEB2 BATF ZIC2 JUND POLR2A ZNF629 FOSL2 ZNF600 FOS CACNA1C-AS3 RPS6P18 CACNA1C
GH12I002624 Enhancer 0.7 ENCODE 0.4 -17.5 -17469 1.5 CTCF BACH1 GATA3 ZNF316 ZNF143 FOSL2 NFE2 FOS ZNF444 MAFK CBX3P4 FKBP4 ITFG2 CACNA1C-AS3 RPS6P18 CACNA1C
GH12I002639 Enhancer 0.9 Ensembl ENCODE 0.3 -33.3 -33349 1.8 CTCF PKNOX1 JUN BATF ZIC2 FOSL1 ZFHX2 POLR2A EGR1 ZNF143 RPS6P18 CACNA1C-AS3 CACNA1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CACNA1C-AS3 Gene

Genomic Locations for CACNA1C-AS3 Gene
chr12:2,603,350-2,607,440
(GRCh38/hg38)
Size:
4,091 bases
Orientation:
Minus strand
chr12:2,712,516-2,716,606
(GRCh37/hg19)

Genomic View for CACNA1C-AS3 Gene

Genes around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1C-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1C-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CACNA1C-AS3 Gene

Proteins for CACNA1C-AS3 Gene

Post-translational modifications for CACNA1C-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1C-AS3 Gene

Domains & Families for CACNA1C-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1C-AS3 Gene

Function for CACNA1C-AS3 Gene

Phenotypes From GWAS Catalog for CACNA1C-AS3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1C-AS3 Gene

Localization for CACNA1C-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CACNA1C-AS3 Gene

Pathways & Interactions for CACNA1C-AS3 Gene

SuperPathways for CACNA1C-AS3 Gene

No Data Available

Interacting Proteins for CACNA1C-AS3 Gene

Gene Ontology (GO) - Biological Process for CACNA1C-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CACNA1C-AS3 Gene

Drugs & Compounds for CACNA1C-AS3 Gene

No Compound Related Data Available

Transcripts for CACNA1C-AS3 Gene

mRNA/cDNA for CACNA1C-AS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1C-AS3 Gene

No ASD Table

Relevant External Links for CACNA1C-AS3 Gene

GeneLoc Exon Structure for
CACNA1C-AS3
ECgene alternative splicing isoforms for
CACNA1C-AS3

Expression for CACNA1C-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CACNA1C-AS3 Gene

genes like me logo Genes that share expression patterns with CACNA1C-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CACNA1C-AS3 Gene

Orthologs for CACNA1C-AS3 Gene

Evolution for CACNA1C-AS3 Gene

ENSEMBL:
Gene Tree for CACNA1C-AS3 (if available)
TreeFam:
Gene Tree for CACNA1C-AS3 (if available)

No data available for Orthologs for CACNA1C-AS3 Gene

Paralogs for CACNA1C-AS3 Gene

No data available for Paralogs for CACNA1C-AS3 Gene

Variants for CACNA1C-AS3 Gene

Additional Variant Information for CACNA1C-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CACNA1C-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CACNA1C-AS3 Gene

Disorders for CACNA1C-AS3 Gene

No disorders were found for CACNA1C-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CACNA1C-AS3 Gene

Publications for CACNA1C-AS3 Gene

No publications were found for CACNA1C-AS3 Gene.

Products for CACNA1C-AS3 Gene

Sources for CACNA1C-AS3 Gene

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