Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CACNA1C-AS3 Gene

Subcategory (RNA class) for CACNA1C-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CACNA1C-AS3 Gene

  • CACNA1C Antisense RNA 3 2 3 5
  • CACNA1C Antisense RNA 3 (Non-Protein Coding) 2

External Ids for CACNA1C-AS3 Gene

Previous GeneCards Identifiers for CACNA1C-AS3 Gene

  • GC00U933206
  • GC12M002713

Summaries for CACNA1C-AS3 Gene

GeneCards Summary for CACNA1C-AS3 Gene

CACNA1C-AS3 (CACNA1C Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CACNA1C-AS3 Gene

Genomics for CACNA1C-AS3 Gene

Regulatory Elements for CACNA1C-AS3 Gene

Enhancers for CACNA1C-AS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F001604 1.8 FANTOM5 Ensembl ENCODE 16.2 +999.9 999867 6.4 HDGF ARNT MLX WRNIP1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF302 ENSG00000250132 CACNA1C-AS3 CACNA1C-IT3 DCP1B WNT5B ERC1 RAD52 ADIPOR2 FBXL14 MIR3649
GH12F001658 1.5 FANTOM5 ENCODE 16.2 +946.2 946155 5.3 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF416 FOS ADIPOR2 CACNA1C-AS3 CACNA1C-IT3 CACNA2D4 ENSG00000256706 DCP1B LRTM2 MIR3649
GH12F001924 1.3 Ensembl ENCODE 16.2 +682.5 682479 1.3 ATF1 ZNF133 FEZF1 GLI4 ZNF2 ZNF121 ZNF302 ZNF416 ZNF548 ZNF263 ITFG2 DCP1B CBX3P4 CACNA1C-AS3 CACNA1C-IT3 LRTM2 ENSG00000250132 IQSEC3P1 CACNA2D4 GC12M001928
GH12F002256 0.9 ENCODE 16.2 +350.7 350742 1.6 ZNF133 GLI4 RARA ZNF121 ZNF23 ZNF302 ZNF138 ZNF416 ZNF391 ZNF202 ITFG2 DCP1B CACNA1C-IT3 RPS27P3 CBX3P4 CACNA1C-AS3 CACNA1C-AS4 IQSEC3P1 PIR46918
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Location for CACNA1C-AS3 Gene

2,603,350 bp from pter
2,607,440 bp from pter
4,091 bases
Minus strand

Genomic View for CACNA1C-AS3 Gene

Genes around CACNA1C-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CACNA1C-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CACNA1C-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CACNA1C-AS3 Gene

Proteins for CACNA1C-AS3 Gene

Post-translational modifications for CACNA1C-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CACNA1C-AS3 Gene

Domains & Families for CACNA1C-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CACNA1C-AS3 Gene

Function for CACNA1C-AS3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CACNA1C-AS3 Gene

Localization for CACNA1C-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CACNA1C-AS3 Gene

Pathways & Interactions for CACNA1C-AS3 Gene

SuperPathways for CACNA1C-AS3 Gene

No Data Available

Interacting Proteins for CACNA1C-AS3 Gene

Gene Ontology (GO) - Biological Process for CACNA1C-AS3 Gene


No data available for Pathways by source and SIGNOR curated interactions for CACNA1C-AS3 Gene

Transcripts for CACNA1C-AS3 Gene

mRNA/cDNA for CACNA1C-AS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CACNA1C-AS3 Gene

No ASD Table

Relevant External Links for CACNA1C-AS3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CACNA1C-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CACNA1C-AS3 Gene

genes like me logo Genes that share expression patterns with CACNA1C-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CACNA1C-AS3 Gene

Orthologs for CACNA1C-AS3 Gene

Evolution for CACNA1C-AS3 Gene

Gene Tree for CACNA1C-AS3 (if available)
Gene Tree for CACNA1C-AS3 (if available)

No data available for Orthologs for CACNA1C-AS3 Gene

Paralogs for CACNA1C-AS3 Gene

No data available for Paralogs for CACNA1C-AS3 Gene

Variants for CACNA1C-AS3 Gene

Relevant External Links for CACNA1C-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CACNA1C-AS3 Gene

Disorders for CACNA1C-AS3 Gene

No disorders were found for CACNA1C-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CACNA1C-AS3 Gene

Publications for CACNA1C-AS3 Gene

No publications were found for CACNA1C-AS3 Gene.

Products for CACNA1C-AS3 Gene

Sources for CACNA1C-AS3 Gene

Loading form....