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Aliases for CAB39P1 Gene

Subcategory (RNA class) for CAB39P1 Gene

antisense

Aliases for CAB39P1 Gene

  • Calcium Binding Protein 39 Pseudogene 1 2 3 5

External Ids for CAB39P1 Gene

ORGUL Members for CAB39P1 Gene

Previous GeneCards Identifiers for CAB39P1 Gene

  • GC00U936207

Summaries for CAB39P1 Gene

GeneCards Summary for CAB39P1 Gene

CAB39P1 (Calcium Binding Protein 39 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for CAB39P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CAB39P1 Gene

Genomics for CAB39P1 Gene

Regulatory Elements for CAB39P1 Gene

Enhancers for CAB39P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H060943 1.4 FANTOM5 ENCODE 14.6 +314.5 314514 3.2 HDGF PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF548 FOS SP3 CAB39P1 ENSG00000248199 ZSWIM6 ELOVL7 ERCC8 NDUFAF2 LOC105378991
GH05H060651 1 Ensembl ENCODE 0.3 +21.8 21751 1.4 PKNOX1 JUN CEBPG RFX5 FOSL1 CTBP1 GATA3 ZNF316 ZNF547 FOSL2 RPL31P8 ERCC8 DEPDC1B PIR55567 CAB39P1
GH05H060597 0.9 Ensembl ENCODE 0.3 -32.5 -32523 1.4 ZNF680 CBFB JUNB BATF BCL11A EED IKZF1 SCRT2 ETV6 RUNX3 PIR58618 GC05P060568 CAB39P1
GH05H060633 0.2 ENCODE 0.7 +3.0 3035 0.2 CAB39P1 PIR55567
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CAB39P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CAB39P1 Gene

Genomic Locations for CAB39P1 Gene
chr5:60,630,514-60,630,973
(GRCh38/hg38)
Size:
460 bases
Orientation:
Plus strand
chr5:59,926,341-59,926,800
(GRCh37/hg19)

Genomic View for CAB39P1 Gene

Genes around CAB39P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CAB39P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CAB39P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CAB39P1 Gene

Proteins for CAB39P1 Gene

Post-translational modifications for CAB39P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CAB39P1 Gene

Domains & Families for CAB39P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CAB39P1 Gene

Function for CAB39P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CAB39P1 Gene

Localization for CAB39P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CAB39P1 Gene

Pathways & Interactions for CAB39P1 Gene

SuperPathways for CAB39P1 Gene

No Data Available

Interacting Proteins for CAB39P1 Gene

Gene Ontology (GO) - Biological Process for CAB39P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CAB39P1 Gene

Drugs & Compounds for CAB39P1 Gene

No Compound Related Data Available

Transcripts for CAB39P1 Gene

mRNA/cDNA for CAB39P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CAB39P1 Gene

No ASD Table

Relevant External Links for CAB39P1 Gene

GeneLoc Exon Structure for
CAB39P1
ECgene alternative splicing isoforms for
CAB39P1

Expression for CAB39P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CAB39P1 Gene:

CAB39P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CAB39P1 Gene

Orthologs for CAB39P1 Gene

Evolution for CAB39P1 Gene

ENSEMBL:
Gene Tree for CAB39P1 (if available)
TreeFam:
Gene Tree for CAB39P1 (if available)

No data available for Orthologs for CAB39P1 Gene

Paralogs for CAB39P1 Gene

No data available for Paralogs for CAB39P1 Gene

Variants for CAB39P1 Gene

Relevant External Links for CAB39P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CAB39P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CAB39P1 Gene

Disorders for CAB39P1 Gene

No disorders were found for CAB39P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CAB39P1 Gene

Publications for CAB39P1 Gene

No publications were found for CAB39P1 Gene.

Products for CAB39P1 Gene

Sources for CAB39P1 Gene

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