Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CA8 Gene

Aliases for CA8 Gene

  • Carbonic Anhydrase VIII 2 3 4
  • CALS 3 4 6
  • CARP 3 4 6
  • CA-VIII 3 4
  • CAMRQ3 3 6
  • Carbonic Anhydrase-Related Protein 3
  • Carbonic Anhydrase-Like Sequence 3
  • Carbonate Dehydratase 3
  • CA-Related Protein 3

External Ids for CA8 Gene

Previous HGNC Symbols for CA8 Gene

  • CALS

Previous GeneCards Identifiers for CA8 Gene

  • GC08U990008
  • GC08M061040
  • GC08M060824
  • GC08M061151
  • GC08M061264
  • GC08M056591

Summaries for CA8 Gene

Entrez Gene Summary for CA8 Gene

  • The protein encoded by this gene was initially named CA-related protein because of sequence similarity to other known carbonic anhydrase genes. However, the gene product lacks carbonic anhydrase activity (i.e., the reversible hydration of carbon dioxide). The gene product continues to carry a carbonic anhydrase designation based on clear sequence identity to other members of the carbonic anhydrase gene family. The absence of CA8 gene transcription in the cerebellum of the lurcher mutant in mice with a neurologic defect suggests an important role for this acatalytic form. [provided by RefSeq, Jul 2008]

GeneCards Summary for CA8 Gene

CA8 (Carbonic Anhydrase VIII) is a Protein Coding gene. Diseases associated with CA8 include cerebellar ataxia and mental retardation with or without quadrupedal locomotion 3 and cerebellar hypoplasia and mental retardation with or without quadrupedal locomotion 1. Among its related pathways are Nitrogen metabolism. GO annotations related to this gene include carbonate dehydratase activity. An important paralog of this gene is CA14.

UniProtKB/Swiss-Prot for CA8 Gene

  • Does not have a carbonic anhydrase catalytic activity

Gene Wiki entry for CA8 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CA8 Gene

Genomics for CA8 Gene

Regulatory Elements for CA8 Gene

Genomic Location for CA8 Gene

Start:
60,187,347 bp from pter
End:
60,281,412 bp from pter
Size:
94,066 bases
Orientation:
Minus strand

Genomic View for CA8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CA8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CA8 Gene

Proteins for CA8 Gene

  • Protein details for CA8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P35219-CAH8_HUMAN
    Recommended name:
    Carbonic anhydrase-related protein
    Protein Accession:
    P35219
    Secondary Accessions:
    • A8K0A5
    • B3KQZ7
    • Q32MY2

    Protein attributes for CA8 Gene

    Size:
    290 amino acids
    Molecular mass:
    32973 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for CA8 Gene

neXtProt entry for CA8 Gene

Proteomics data for CA8 Gene at MOPED

Post-translational modifications for CA8 Gene

  • Ubiquitination at Lys96
  • Modification sites at PhosphoSitePlus

Other Protein References for CA8 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • R&D Systems Antibodies for CA8 (Carbonic Anhydrase VIII/CA8)

No data available for DME Specific Peptides for CA8 Gene

Domains for CA8 Gene

Gene Families for CA8 Gene

HGNC:
  • CA :Carbonic anhydrases

Suggested Antigen Peptide Sequences for CA8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P35219

UniProtKB/Swiss-Prot:

CAH8_HUMAN :
  • P35219
Family:
  • Belongs to the alpha-carbonic anhydrase family.
genes like me logo Genes that share domains with CA8: view

Function for CA8 Gene

Molecular function for CA8 Gene

GENATLAS Biochemistry: carbonic anhydrase VIII,expressed in several tissues,putatively involved in nerve function
UniProtKB/Swiss-Prot Function: Does not have a carbonic anhydrase catalytic activity

Gene Ontology (GO) - Molecular Function for CA8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004089 carbonate dehydratase activity IEA --
GO:0005515 protein binding IPI 25416956
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with CA8: view

Phenotypes for CA8 Gene

genes like me logo Genes that share phenotypes with CA8: view

Animal Model Products

miRNA for CA8 Gene

miRTarBase miRNAs that target CA8

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CA8

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for CA8 Gene

Localization for CA8 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CA8 Gene COMPARTMENTS Subcellular localization image for CA8 gene
Compartment Confidence
cytoskeleton 3
cytosol 3
chloroplast 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for CA8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with CA8: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for CA8 Gene

Pathways for CA8 Gene

SuperPathways for CA8 Gene

Superpath Contained pathways
1 Nitrogen metabolism
genes like me logo Genes that share pathways with CA8: view

Pathways by source for CA8 Gene

1 KEGG pathway for CA8 Gene

Gene Ontology (GO) - Biological Process for CA8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006730 one-carbon metabolic process IEA --
GO:0048015 phosphatidylinositol-mediated signaling IEA --
genes like me logo Genes that share ontologies with CA8: view

Compounds for CA8 Gene

(4) HMDB Compounds for CA8 Gene

Compound Synonyms Cas Number PubMed IDs
Carbon dioxide
  • Carbon oxide
124-38-9
Carbonic acid
  • acid of air
463-79-6
Water
  • Dihydrogen oxide
7732-18-5
Zinc
  • Zinc
7440-66-6

(1) Drugbank Compounds for CA8 Gene

Compound Synonyms Cas Number Type Actions PubMed IDs
Zonisamide
  • Zonisamida [Spanish]
68291-97-4 target inhibitor

(3) Novoseek inferred chemical compound relationships for CA8 Gene

Compound -log(P) Hits PubMed IDs
bicarbonate 55.6 5
histidine 37.3 1
carbon dioxide 22.1 2
genes like me logo Genes that share compounds with CA8: view

Transcripts for CA8 Gene

Unigene Clusters for CA8 Gene

Carbonic anhydrase VIII:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CA8

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CA8 Gene

No ASD Table

Relevant External Links for CA8 Gene

GeneLoc Exon Structure for
CA8
ECgene alternative splicing isoforms for
CA8

Expression for CA8 Gene

mRNA expression in normal human tissues for CA8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CA8 Gene

This gene is overexpressed in Brain - Cerebellum (7.5) and Kidney - Cortex (4.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for CA8 Gene

SOURCE GeneReport for Unigene cluster for CA8 Gene Hs.654388

genes like me logo Genes that share expressions with CA8: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for CA8 Gene

Orthologs for CA8 Gene

This gene was present in the common ancestor of animals.

Orthologs for CA8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CA8 35
  • 100 (n)
  • 100 (a)
CA8 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CA8 35
  • 90.46 (n)
  • 98.97 (a)
CA8 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CA8 35
  • 92.87 (n)
  • 99.66 (a)
CA8 36
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Car8 35
  • 88.85 (n)
  • 97.59 (a)
Car8 16
Car8 36
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CA8 36
  • 93 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CA8 36
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Car8 35
  • 87.93 (n)
  • 98.97 (a)
chicken
(Gallus gallus)
Aves CA8 35
  • 79.62 (n)
  • 88.34 (a)
CA8 36
  • 90 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CA8 36
  • 86 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ca8 35
  • 76.65 (n)
  • 83.27 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.3200 35
zebrafish
(Danio rerio)
Actinopterygii ca8 35
  • 74.87 (n)
  • 83.98 (a)
ca8 36
  • 81 (a)
OneToOne
Dr.13836 35
fruit fly
(Drosophila melanogaster)
Insecta CAH2 36
  • 25 (a)
OneToMany
CG6906 37
  • 35 (a)
worm
(Caenorhabditis elegans)
Secernentea cah-3 36
  • 31 (a)
ManyToMany
cah-5 36
  • 24 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10988 36
  • 31 (a)
OneToOne
Species with no ortholog for CA8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CA8 Gene

ENSEMBL:
Gene Tree for CA8 (if available)
TreeFam:
Gene Tree for CA8 (if available)

Paralogs for CA8 Gene

Paralogs for CA8 Gene

Selected SIMAP similar genes for CA8 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CA8: view

Variants for CA8 Gene

Sequence variations from dbSNP and Humsavar for CA8 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs3140 -- 60,189,151(+) CAAAG(A/T)AGTGG utr-variant-3-prime
rs1129430 -- 60,260,484(+) ATTAG(A/G)GGGTG intron-variant
rs2067757 -- 60,264,074(-) TTTGA(A/G)TGAAG intron-variant
rs2242155 -- 60,188,567(+) TCACC(A/G)TTTCC downstream-variant-500B
rs2242156 -- 60,188,603(+) ATACA(C/T)AAGGG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CA8 Gene

Variant ID Type Subtype PubMed ID
nsv831332 CNV Gain 17160897
nsv831333 CNV Gain 17160897
nsv396601 CNV Loss 16902084
nsv890943 CNV Loss 21882294
nsv831334 CNV Gain 17160897

Relevant External Links for CA8 Gene

HapMap Linkage Disequilibrium report
CA8
Human Gene Mutation Database (HGMD)
CA8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CA8 Gene

Disorders for CA8 Gene

(1) OMIM Diseases for CA8 Gene (114815)

UniProtKB/Swiss-Prot

CAH8_HUMAN
  • Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 3 (CMARQ3) [MIM:613227]: A congenital cerebellar ataxia associated with dysarthia, quadrupedal gait and mental retardation. {ECO:0000269 PubMed:19461874}. Note=The disease is caused by mutations affecting the gene represented in this entry.

(1) University of Copenhagen DISEASES for CA8 Gene

(7) Novoseek inferred disease relationships for CA8 Gene

Disease -log(P) Hits PubMed IDs
adenocarcinoma lung 45.6 4
nsclc 34.7 2
colorectal carcinoma 32.2 2
adenocarcinoma 28.1 5
cancer lung 20.3 4

Relevant External Links for CA8

Genetic Association Database (GAD)
CA8
Human Genome Epidemiology (HuGE) Navigator
CA8
genes like me logo Genes that share disorders with CA8: view

Publications for CA8 Gene

  1. The deduced amino acid sequence of human carbonic anhydrase-related protein (CARP) is 98% identical to the mouse homologue. (PMID: 8482548) Skaggs L.A. … Tashian R.E. (Gene 1993) 3 4 23
  2. Carbonic anhydrase-related protein VIII promotes colon cancer cell growth. (PMID: 17219437) Nishikata M. … Onishi S. (Mol. Carcinog. 2007) 2 3 23
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Assignment of the gene for human carbonic anhydrase VIII(CA8) to chromosome 8q11-->q12. (PMID: 7587398) Bergenhem N.C. … Tashian R.E. (Cytogenet. Cell Genet. 1995) 3 23

Products for CA8 Gene

  • Addgene plasmids for CA8

Sources for CA8 Gene

Back to Top

Content