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Aliases for C8orf86 Gene

Aliases for C8orf86 Gene

  • Chromosome 8 Open Reading Frame 86 2 3

External Ids for C8orf86 Gene

Summaries for C8orf86 Gene

GeneCards Summary for C8orf86 Gene

C8orf86 (Chromosome 8 Open Reading Frame 86) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C8orf86 Gene

Genomics for C8orf86 Gene

Genomic Location for C8orf86 Gene

Start:
38,510,834 bp from pter
End:
38,528,662 bp from pter
Size:
17,829 bases
Orientation:
Minus strand

Genomic View for C8orf86 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C8orf86 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C8orf86 Gene

Regulatory Elements for C8orf86 Gene

Proteins for C8orf86 Gene

  • Protein details for C8orf86 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZUL3-CH086_HUMAN
    Recommended name:
    Uncharacterized protein C8orf86
    Protein Accession:
    Q6ZUL3
    Secondary Accessions:
    • A4QPB7

    Protein attributes for C8orf86 Gene

    Size:
    223 amino acids
    Molecular mass:
    24736 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C8orf86 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C8orf86 Gene

Proteomics data for C8orf86 Gene at MOPED

Post-translational modifications for C8orf86 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C8orf86 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C8orf86 Gene

Domains for C8orf86 Gene

Protein Domains for C8orf86 Gene

ProtoNet:
genes like me logo Genes that share domains with C8orf86: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C8orf86 Gene

Function for C8orf86 Gene

Phenotypes for C8orf86 Gene

GenomeRNAi human phenotypes for C8orf86:
genes like me logo Genes that share phenotypes with C8orf86: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C8orf86 Gene

Localization for C8orf86 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C8orf86 Gene COMPARTMENTS Subcellular localization image for C8orf86 gene
Compartment Confidence
cytosol 2
nucleus 2
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for C8orf86 Gene

Pathways for C8orf86 Gene

SuperPathways for C8orf86 Gene

No Data Available

Interacting Proteins for C8orf86 Gene

Gene Ontology (GO) - Biological Process for C8orf86 Gene

None

No data available for Pathways by source for C8orf86 Gene

Transcripts for C8orf86 Gene

mRNA/cDNA for C8orf86 Gene

(3) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C8orf86 Gene

Chromosome 8 open reading frame 86:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C8orf86 Gene

No ASD Table

Relevant External Links for C8orf86 Gene

GeneLoc Exon Structure for
C8orf86
ECgene alternative splicing isoforms for
C8orf86

Expression for C8orf86 Gene

mRNA expression in normal human tissues for C8orf86 Gene

mRNA differential expression in normal tissues according to GTEx for C8orf86 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (4.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C8orf86 Gene

SOURCE GeneReport for Unigene cluster for C8orf86 Gene Hs.546586

genes like me logo Genes that share expressions with C8orf86: view

Orthologs for C8orf86 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C8orf86 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C8H8orf86 36
  • 99.33 (n)
  • 99.33 (a)
C8orf86 37
  • 99 (a)
OneToOne
Species with no ortholog for C8orf86:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C8orf86 Gene

ENSEMBL:
Gene Tree for C8orf86 (if available)
TreeFam:
Gene Tree for C8orf86 (if available)

Paralogs for C8orf86 Gene

No data available for Paralogs for C8orf86 Gene

Variants for C8orf86 Gene

Sequence variations from dbSNP and Humsavar for C8orf86 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs328298 -- 38,511,188(-) ACAGA(C/T)CTCCT utr-variant-3-prime
rs328299 -- 38,510,752(-) GCGAA(A/C)TTGGG downstream-variant-500B
rs1037581 -- 38,525,088(-) tttat(A/T)aatat intron-variant
rs1037582 -- 38,525,087(-) ttata(A/T)atata intron-variant
rs1037583 -- 38,525,083(-) aaata(A/T)ataaa intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C8orf86 Gene

Variant ID Type Subtype PubMed ID
nsv831295 CNV Gain+Loss 17160897
esv6024 CNV Loss 19470904
esv1005442 CNV Insertion 20482838
nsv397414 CNV Insertion 16902084
esv1028558 CNV Insertion 17803354
esv2736891 CNV Deletion 23290073
esv2736892 CNV Deletion 23290073
esv1219224 CNV Deletion 17803354

Relevant External Links for C8orf86 Gene

HapMap Linkage Disequilibrium report
C8orf86

Disorders for C8orf86 Gene

Relevant External Links for C8orf86

Genetic Association Database (GAD)
C8orf86
genes like me logo Genes that share disorders with C8orf86: view

No data available for UniProtKB/Swiss-Prot for C8orf86 Gene

Publications for C8orf86 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. High-resolution whole-genome association study of Parkinson disease. (PMID: 16252231) Maraganore D.M. … Ballinger D.G. (Am. J. Hum. Genet. 2005) 49
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for C8orf86 Gene

Sources for C8orf86 Gene

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