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Aliases for C8orf82 Gene

Aliases for C8orf82 Gene

  • Chromosome 8 Open Reading Frame 82 2 3

External Ids for C8orf82 Gene

Previous GeneCards Identifiers for C8orf82 Gene

  • GC08M145723
  • GC08M145751
  • GC08M140865

Summaries for C8orf82 Gene

GeneCards Summary for C8orf82 Gene

C8orf82 (Chromosome 8 Open Reading Frame 82) is a Protein Coding gene. Diseases associated with C8orf82 include malaria.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C8orf82 Gene

Genomics for C8orf82 Gene

Regulatory Elements for C8orf82 Gene

Transcription factor binding sites by QIAGEN in the C8orf82 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C8orf82 Gene

Start:
144,525,733 bp from pter
End:
144,529,132 bp from pter
Size:
3,400 bases
Orientation:
Minus strand

Genomic View for C8orf82 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C8orf82 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C8orf82 Gene

Proteins for C8orf82 Gene

  • Protein details for C8orf82 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P1X6-CH082_HUMAN
    Recommended name:
    UPF0598 protein C8orf82
    Protein Accession:
    Q6P1X6
    Secondary Accessions:
    • Q6GMR2
    • Q6P2Q7

    Protein attributes for C8orf82 Gene

    Size:
    216 amino acids
    Molecular mass:
    23889 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C8orf82 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C8orf82 Gene

Proteomics data for C8orf82 Gene at MOPED

Post-translational modifications for C8orf82 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C8orf82 Gene

No data available for DME Specific Peptides for C8orf82 Gene

Domains for C8orf82 Gene

Protein Domains for C8orf82 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C8orf82 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6P1X6

UniProtKB/Swiss-Prot:

CH082_HUMAN :
  • Q6P1X6
Family:
  • Belongs to the UPF0598 family.
genes like me logo Genes that share domains with C8orf82: view

No data available for Gene Families for C8orf82 Gene

Function for C8orf82 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C8orf82

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C8orf82 Gene

Localization for C8orf82 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C8orf82 Gene COMPARTMENTS Subcellular localization image for C8orf82 gene
Compartment Confidence
mitochondrion 3
cytosol 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C8orf82 Gene

Pathways for C8orf82 Gene

SuperPathways for C8orf82 Gene

No Data Available

Interacting Proteins for C8orf82 Gene

Gene Ontology (GO) - Biological Process for C8orf82 Gene

None

No data available for Pathways by source for C8orf82 Gene

Transcripts for C8orf82 Gene

mRNA/cDNA for C8orf82 Gene

Unigene Clusters for C8orf82 Gene

Chromosome 8 open reading frame 82:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C8orf82

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C8orf82 Gene

No ASD Table

Relevant External Links for C8orf82 Gene

GeneLoc Exon Structure for
C8orf82
ECgene alternative splicing isoforms for
C8orf82

Expression for C8orf82 Gene

mRNA expression in normal human tissues for C8orf82 Gene

Protein differential expression in normal tissues for C8orf82 Gene

This gene is overexpressed in Liver (6.4).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for C8orf82 Gene

SOURCE GeneReport for Unigene cluster for C8orf82 Gene Hs.105685

genes like me logo Genes that share expressions with C8orf82: view

Expression partners for C8orf82 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C8orf82 Gene

Orthologs for C8orf82 Gene

This gene was present in the common ancestor of animals.

Orthologs for C8orf82 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia C14H8orf82 35
  • 87.8 (n)
  • 87.8 (a)
C14H8orf82 36
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia C030006K11Rik 35
  • 84.1 (n)
  • 86.57 (a)
C030006K11Rik 16
C030006K11Rik 36
  • 85 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C8H8orf82 35
  • 98.92 (n)
  • 98.15 (a)
C8ORF82 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia MGC94207 35
  • 83.33 (n)
  • 87.96 (a)
dog
(Canis familiaris)
Mammalia C8orf82 36
  • 27 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C8orf82 36
  • 64 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C20H8orf82 36
  • 55 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP011455 35
  • 56.87 (n)
  • 53.67 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG30010 35
  • 56.76 (n)
  • 56.08 (a)
CG30010 36
  • 49 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea CELE_F59C6.12 35
  • 50 (n)
  • 48 (a)
F59C6.12 36
  • 43 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 42 (a)
OneToOne
Species with no ortholog for C8orf82:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for C8orf82 Gene

ENSEMBL:
Gene Tree for C8orf82 (if available)
TreeFam:
Gene Tree for C8orf82 (if available)

Paralogs for C8orf82 Gene

No data available for Paralogs for C8orf82 Gene

Variants for C8orf82 Gene

Structural Variations from Database of Genomic Variants (DGV) for C8orf82 Gene

Variant ID Type Subtype PubMed ID
nsv891807 CNV Loss 21882294
nsv428208 CNV Gain 18775914
nsv891846 CNV Loss 21882294
nsv831489 CNV Loss 17160897
dgv7966n71 CNV Loss 21882294
dgv7969n71 CNV Loss 21882294
dgv7975n71 CNV Loss 21882294
dgv7976n71 CNV Loss 21882294
dgv7977n71 CNV Loss 21882294
dgv7978n71 CNV Loss 21882294
nsv891897 CNV Loss 21882294
nsv891912 CNV Loss 21882294
dgv1207n67 CNV Gain 20364138
dgv7984n71 CNV Loss 21882294
nsv522459 CNV Loss 19592680

Relevant External Links for C8orf82 Gene

HapMap Linkage Disequilibrium report
C8orf82

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for C8orf82 Gene

Disorders for C8orf82 Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for C8orf82 Gene in MalaCards »

(1) Diseases for C8orf82 Gene including...

genes like me logo Genes that share disorders with C8orf82: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for C8orf82 Gene

Publications for C8orf82 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for C8orf82 Gene

Sources for C8orf82 Gene

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