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Aliases for C8orf31 Gene

Aliases for C8orf31 Gene

  • Chromosome 8 Open Reading Frame 31 2 3

External Ids for C8orf31 Gene

Previous GeneCards Identifiers for C8orf31 Gene

  • GC08P144193
  • GC08P139374
  • GC08P144120

Summaries for C8orf31 Gene

GeneCards Summary for C8orf31 Gene

C8orf31 (Chromosome 8 Open Reading Frame 31) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C8orf31 Gene

Genomics for C8orf31 Gene

Regulatory Elements for C8orf31 Gene

Genomic Location for C8orf31 Gene

Start:
143,039,209 bp from pter
End:
143,059,942 bp from pter
Size:
20,734 bases
Orientation:
Plus strand

Genomic View for C8orf31 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C8orf31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C8orf31 Gene

Proteins for C8orf31 Gene

  • Protein details for C8orf31 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N9H6-CH031_HUMAN
    Recommended name:
    Uncharacterized protein C8orf31
    Protein Accession:
    Q8N9H6
    Secondary Accessions:
    • Q6GMU7

    Protein attributes for C8orf31 Gene

    Size:
    132 amino acids
    Molecular mass:
    14527 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C8orf31 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C8orf31 Gene

Proteomics data for C8orf31 Gene at MOPED

Post-translational modifications for C8orf31 Gene

No Post-translational modifications

Other Protein References for C8orf31 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C8orf31 Gene

Domains for C8orf31 Gene

Protein Domains for C8orf31 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C8orf31: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C8orf31 Gene

Function for C8orf31 Gene

genes like me logo Genes that share phenotypes with C8orf31: view

Animal Model Products

CRISPR Products

miRNA for C8orf31 Gene

miRTarBase miRNAs that target C8orf31

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C8orf31

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for C8orf31 Gene

Localization for C8orf31 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C8orf31 Gene COMPARTMENTS Subcellular localization image for C8orf31 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 1
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C8orf31 Gene

Pathways for C8orf31 Gene

SuperPathways for C8orf31 Gene

No Data Available

Interacting Proteins for C8orf31 Gene

Gene Ontology (GO) - Biological Process for C8orf31 Gene

None

No data available for Pathways by source for C8orf31 Gene

Transcripts for C8orf31 Gene

Unigene Clusters for C8orf31 Gene

Chromosome 8 open reading frame 31:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C8orf31

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C8orf31
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C8orf31 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6
SP1: -
SP2: - -
SP3: -

Relevant External Links for C8orf31 Gene

GeneLoc Exon Structure for
C8orf31
ECgene alternative splicing isoforms for
C8orf31

Expression for C8orf31 Gene

mRNA expression in normal human tissues for C8orf31 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for C8orf31 Gene Hs.660382

genes like me logo Genes that share expressions with C8orf31: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for C8orf31 Gene

Orthologs for C8orf31 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C8orf31 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C8H8orf31 35
  • 93.89 (n)
  • 93.33 (a)
C8orf31 36
  • 96 (a)
OneToOne
Species with no ortholog for C8orf31:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C8orf31 Gene

ENSEMBL:
Gene Tree for C8orf31 (if available)
TreeFam:
Gene Tree for C8orf31 (if available)

Paralogs for C8orf31 Gene

No data available for Paralogs for C8orf31 Gene

Variants for C8orf31 Gene

Sequence variations from dbSNP and Humsavar for C8orf31 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs4074202 -- 143,037,818(-) CACAC(C/T)ACAGC upstream-variant-2KB
rs4074203 -- 143,037,637(-) CACTC(A/G)CAttt upstream-variant-2KB
rs4076076 -- 143,037,638(-) TCACT(C/T)ACAtt upstream-variant-2KB
rs4246831 -- 143,048,344(-) GAAAC(C/T)AAGCA intron-variant
rs4323451 -- 143,039,642(+) GGCCG(C/T)GTGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C8orf31 Gene

Variant ID Type Subtype PubMed ID
nsv465991 CNV Loss 19166990
esv25583 CNV Loss 19812545
esv2670756 CNV Deletion 23128226
nsv512976 CNV Insertion 21212237
esv33872 CNV Gain 17666407
esv1451224 CNV Insertion 17803354
esv2737948 CNV Deletion 23290073
nsv891650 CNV Gain 21882294
nsv6437 CNV Insertion 18451855

Relevant External Links for C8orf31 Gene

HapMap Linkage Disequilibrium report
C8orf31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C8orf31 Gene

Disorders for C8orf31 Gene

No disorders were found for C8orf31 Gene.

No data available for UniProtKB/Swiss-Prot for C8orf31 Gene

Publications for C8orf31 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C8orf31 Gene

Sources for C8orf31 Gene

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