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C7orf77 Gene(Protein Coding)

Chromosome 7 Open Reading Frame 77

GCID:
GC07M124777
GIFtS:
16
Genes Participants
UDN Logo

Aliases for C7orf77 Gene

Aliases for C7orf77 Gene

  • Chromosome 7 Open Reading Frame 77 2 3 5

External Ids for C7orf77 Gene

Summaries for C7orf77 Gene

GeneCards Summary for C7orf77 Gene

C7orf77 (Chromosome 7 Open Reading Frame 77) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf77 Gene

Genomics for C7orf77 Gene

Products:

  1. Regulatory Element

Regulatory Elements for C7orf77 Gene

Enhancers for C7orf77 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G124790 0.6 ENCODE 0.7 -1.2 -1169 3.0 MAFG ATF2 CTBP1 GATA3 ZNF316 MAFF HNF4A FOS MAFK EMSY POT1-AS1 C7orf77
GH07G124779 0.4 FANTOM5 0.4 +11.3 11326 0.2 CEBPA SP7 C7orf77 GPR37
GH07G124781 0.4 ENCODE 0.4 +8.4 8429 0.8 NRF1 POT1-AS1 C7orf77 GPR37
GH07G124839 0.7 ENCODE 0.2 -49.2 -49175 1.0 SOX5 CTCF FOXA2 ZBTB11 CHD7 RAD21 GABPA NCOR1 NFE2 HOMEZ POT1-AS1 C7orf77
GH07G124928 1.1 ENCODE 0.1 -138.9 -138875 1.7 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 CBX5 POT1-AS1 C7orf77
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C7orf77 on UCSC Golden Path with GeneCards custom track

Genomic Location for C7orf77 Gene

Chromosome:
7
Start:
124,777,292 bp from pter
End:
124,790,810 bp from pter
Size:
13,519 bases
Orientation:
Minus strand

Genomic View for C7orf77 Gene

Genes around C7orf77 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C7orf77 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C7orf77 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for C7orf77 Gene

Proteins for C7orf77 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for C7orf77 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A4D0Y5-CG077_HUMAN
    Recommended name:
    Uncharacterized protein C7orf77
    Protein Accession:
    A4D0Y5

    Protein attributes for C7orf77 Gene

    Size:
    90 amino acids
    Molecular mass:
    10046 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf77 Gene

Post-translational modifications for C7orf77 Gene

No Post-translational modifications

Other Protein References for C7orf77 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C7orf77 Gene

Domains & Families for C7orf77 Gene

Protein Domains for C7orf77 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf77: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C7orf77 Gene

Function for C7orf77 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C7orf77 Gene

Localization for C7orf77 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C7orf77 Gene

Pathways & Interactions for C7orf77 Gene

SuperPathways for C7orf77 Gene

PathCards logo More details on SuperPathways for C7orf77
No Data Available

Interacting Proteins for C7orf77 Gene

Gene Ontology (GO) - Biological Process for C7orf77 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C7orf77 Gene

Drugs & Compounds for C7orf77 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for C7orf77 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for C7orf77 Gene

(1) REFSEQ mRNAs :
(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf77 Gene

No ASD Table

Relevant External Links for C7orf77 Gene

GeneLoc Exon Structure for
C7orf77
ECgene alternative splicing isoforms for
C7orf77

Expression for C7orf77 Gene

Products:

  1. Primer

NURSA nuclear receptor signaling pathways regulating expression of C7orf77 Gene:

C7orf77
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C7orf77 Gene

Orthologs for C7orf77 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C7orf77 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia LOC463691 34
  • 98.52 (n)
Species where no ortholog for C7orf77 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C7orf77 Gene

ENSEMBL:
Gene Tree for C7orf77 (if available)
TreeFam:
Gene Tree for C7orf77 (if available)

Paralogs for C7orf77 Gene

No data available for Paralogs for C7orf77 Gene

Variants for C7orf77 Gene

Sequence variations from dbSNP and Humsavar for C7orf77 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000314046 -- 124,787,915(+) GAGAC(A/G)TCCTA intron-variant
rs1000365029 -- 124,787,509(+) TAAAT(A/G)ACAAG intron-variant
rs1000592227 -- 124,780,986(+) CAGTC(C/T)GAGTC intron-variant
rs1000809165 -- 124,787,997(+) ATATT(C/T)ATTAA intron-variant
rs1001114564 -- 124,787,762(+) AATAC(C/T)TTTTC intron-variant

Relevant External Links for C7orf77 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C7orf77

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C7orf77 Gene

Disorders for C7orf77 Gene

Relevant External Links for C7orf77

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C7orf77

No disorders were found for C7orf77 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf77 Gene

Publications for C7orf77 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for C7orf77 Gene

Sources for C7orf77 Gene

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