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Aliases for C7orf71 Gene

Aliases for C7orf71 Gene

  • Chromosome 7 Open Reading Frame 71 2 3 5

External Ids for C7orf71 Gene

Previous GeneCards Identifiers for C7orf71 Gene

  • GC07P026645
  • GC07P026558

Summaries for C7orf71 Gene

GeneCards Summary for C7orf71 Gene

C7orf71 (Chromosome 7 Open Reading Frame 71) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf71 Gene

Genomics for C7orf71 Gene

Regulatory Elements for C7orf71 Gene

Enhancers for C7orf71 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F026485 2.3 VISTA ENCODE 10.7 -152.0 -151959 1.0 PKNOX1 MXI1 JUN FEZF1 ZNF664 ZNF335 CTBP1 SMARCC2 RCOR1 SMARCC1 LOC105375304 C7orf71 LOC441204 ENSG00000280255 LOC105375202
GH07F026372 2.1 ENCODE 9.3 -262.5 -262496 5.5 HDGF PKNOX1 ARID4B FEZF1 ZNF2 ZNF302 ZNF143 ZNF548 SP3 REST RPL23P7 TPM3P4 HMGB3P20 ENSG00000227386 HOXA10-AS HOXA9 MIR196B CBX3 HNRNPA2B1 KIAA0087
GH07F025845 1.8 FANTOM5 Ensembl ENCODE 9.3 -785.0 -784961 14.1 HDGF PKNOX1 CREB3L1 SIN3A FEZF1 ZNF2 YY1 ZNF766 ZNF416 ZNF143 ENSG00000227386 RPL23P7 LOC105375191 LOC646588 ENSG00000202233 TSEN15P3 C7orf71 LOC100506236 GC07M025774
GH07F025860 1.3 Ensembl ENCODE 9.3 -775.9 -775874 3.2 HDGF PKNOX1 ATF1 SIN3A FEZF1 GLIS2 ELK1 GATA2 ZNF143 FOS LOC646588 C7orf71 LOC100506236 GC07M025774
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C7orf71 on UCSC Golden Path with GeneCards custom track

Genomic Location for C7orf71 Gene

26,637,488 bp from pter
26,651,531 bp from pter
14,044 bases
Plus strand

Genomic View for C7orf71 Gene

Genes around C7orf71 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C7orf71 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C7orf71 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf71 Gene

Proteins for C7orf71 Gene

  • Protein details for C7orf71 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C7orf71
    Protein Accession:

    Protein attributes for C7orf71 Gene

    169 amino acids
    Molecular mass:
    19096 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf71 Gene

Post-translational modifications for C7orf71 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C7orf71 Gene

No data available for DME Specific Peptides for C7orf71 Gene

Domains & Families for C7orf71 Gene

Protein Domains for C7orf71 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf71: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C7orf71 Gene

Function for C7orf71 Gene

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C7orf71 Gene

Localization for C7orf71 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C7orf71 gene
Compartment Confidence
nucleus 2
cytosol 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C7orf71 Gene

Pathways & Interactions for C7orf71 Gene

SuperPathways for C7orf71 Gene

No Data Available

Interacting Proteins for C7orf71 Gene

Gene Ontology (GO) - Biological Process for C7orf71 Gene


No data available for Pathways by source and SIGNOR curated interactions for C7orf71 Gene

Transcripts for C7orf71 Gene

mRNA/cDNA for C7orf71 Gene

(7) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(11) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C7orf71 Gene

Chromosome 7 open reading frame 71:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf71 Gene

No ASD Table

Relevant External Links for C7orf71 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C7orf71 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C7orf71 Gene

mRNA differential expression in normal tissues according to GTEx for C7orf71 Gene

This gene is overexpressed in Testis (x37.9).

NURSA nuclear receptor signaling pathways regulating expression of C7orf71 Gene:


SOURCE GeneReport for Unigene cluster for C7orf71 Gene:

genes like me logo Genes that share expression patterns with C7orf71: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C7orf71 Gene

Orthologs for C7orf71 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C7orf71 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C7H7orf71 34
  • 99.41 (n)
C7orf71 35
  • 99 (a)
Species where no ortholog for C7orf71 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C7orf71 Gene

Gene Tree for C7orf71 (if available)
Gene Tree for C7orf71 (if available)

Paralogs for C7orf71 Gene

No data available for Paralogs for C7orf71 Gene

Variants for C7orf71 Gene

Sequence variations from dbSNP and Humsavar for C7orf71 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1015857 -- 26,643,741(-) aagca(A/G)tcagt intron-variant
rs1024455 -- 26,634,407(-) CCTTC(A/G)GGAAG upstream-variant-2KB
rs10452747 -- 26,642,994(+) gacct(C/T)ctcct intron-variant
rs10452789 -- 26,642,840(+) TATAC(C/T)GTGTG intron-variant
rs111211321 -- 26,639,810(+) ACACA(C/T)GCTTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C7orf71 Gene

Variant ID Type Subtype PubMed ID
esv2734161 CNV deletion 23290073
esv3303956 CNV mobile element insertion 20981092
esv3310045 CNV mobile element insertion 20981092
esv3323424 CNV insertion 20981092
esv3397248 CNV insertion 20981092
nsv1020378 CNV gain 25217958
nsv1076611 CNV duplication 25765185
nsv1137204 CNV deletion 24896259
nsv1140755 CNV deletion 24896259
nsv7393 OTHER inversion 18451855
nsv830929 CNV gain 17160897

Variation tolerance for C7orf71 Gene

Gene Damage Index Score: 4.73; 66.36% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C7orf71 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C7orf71 Gene

Disorders for C7orf71 Gene

Relevant External Links for C7orf71

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C7orf71 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf71 Gene

Publications for C7orf71 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4 64
  2. Heritability and genetic association analysis of cognition in theA Diabetes Heart Study. (PMID: 24684796) Cox A.J. … Bowden D.W. (Neurobiol. Aging 2014) 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  5. Expressed sequence tag analysis of human RPE/choroid for the NEIBank project: over 6000 non-redundant transcripts, novel genes and splice variants. (PMID: 12107410) Wistow G. … Peterson K. (Mol. Vis. 2002) 3 64

Products for C7orf71 Gene

Sources for C7orf71 Gene

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