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Aliases for C7orf62 Gene

Aliases for C7orf62 Gene

  • Chromosome 7 Open Reading Frame 62 2 3 5

External Ids for C7orf62 Gene

Previous GeneCards Identifiers for C7orf62 Gene

  • GC07M088262
  • GC07M088423
  • GC07M083032

Summaries for C7orf62 Gene

GeneCards Summary for C7orf62 Gene

C7orf62 (Chromosome 7 Open Reading Frame 62) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf62 Gene

Genomics for C7orf62 Gene

Regulatory Elements for C7orf62 Gene

Enhancers for C7orf62 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around C7orf62 on UCSC Golden Path with GeneCards custom track

Genomic Location for C7orf62 Gene

Chromosome:
7
Start:
88,794,106 bp from pter
End:
88,795,773 bp from pter
Size:
1,668 bases
Orientation:
Minus strand

Genomic View for C7orf62 Gene

Genes around C7orf62 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C7orf62 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C7orf62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf62 Gene

Proteins for C7orf62 Gene

  • Protein details for C7orf62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TBZ9-CG062_HUMAN
    Recommended name:
    Uncharacterized protein C7orf62
    Protein Accession:
    Q8TBZ9

    Protein attributes for C7orf62 Gene

    Size:
    253 amino acids
    Molecular mass:
    29483 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf62 Gene

Post-translational modifications for C7orf62 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C7orf62 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C7orf62 Gene

Domains & Families for C7orf62 Gene

Protein Domains for C7orf62 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf62: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C7orf62 Gene

Function for C7orf62 Gene

genes like me logo Genes that share phenotypes with C7orf62: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C7orf62 Gene

Localization for C7orf62 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C7orf62 Gene COMPARTMENTS Subcellular localization image for C7orf62 gene
Compartment Confidence
mitochondrion 3
cytosol 2
nucleus 2
golgi apparatus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C7orf62 Gene

Pathways & Interactions for C7orf62 Gene

SuperPathways for C7orf62 Gene

No Data Available

Interacting Proteins for C7orf62 Gene

Gene Ontology (GO) - Biological Process for C7orf62 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C7orf62 Gene

Drugs & Compounds for C7orf62 Gene

No Compound Related Data Available

Transcripts for C7orf62 Gene

mRNA/cDNA for C7orf62 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(21) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C7orf62 Gene

Chromosome 7 open reading frame 62:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf62 Gene

No ASD Table

Relevant External Links for C7orf62 Gene

GeneLoc Exon Structure for
C7orf62
ECgene alternative splicing isoforms for
C7orf62

Expression for C7orf62 Gene

mRNA expression in normal human tissues for C7orf62 Gene

mRNA differential expression in normal tissues according to GTEx for C7orf62 Gene

This gene is overexpressed in Testis (x51.6).

NURSA nuclear receptor signaling pathways regulating expression of C7orf62 Gene:

C7orf62

SOURCE GeneReport for Unigene cluster for C7orf62 Gene:

Hs.112877
genes like me logo Genes that share expression patterns with C7orf62: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C7orf62 Gene

Orthologs for C7orf62 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C7orf62 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia C4H7orf62 34
  • 81.61 (n)
  • 76.98 (a)
C4H7orf62 35
  • 77 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C14H7orf62 34
  • 82.08 (n)
  • 74.7 (a)
C7orf62 35
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4921511H03Rik 34
  • 75.63 (n)
  • 70.36 (a)
4921511H03Rik 16
4921511H03Rik 35
  • 70 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C7H7orf62 34
  • 99.21 (n)
  • 98.42 (a)
C7orf62 35
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1564345 34
  • 74.97 (n)
  • 69.96 (a)
oppossum
(Monodelphis domestica)
Mammalia C7orf62 35
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C7orf62 35
  • 51 (a)
OneToOne
chicken
(Gallus gallus)
Aves C7orf62 35
  • 33 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 39 (a)
OneToMany
-- 35
  • 34 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100497111 34
  • 46.7 (n)
  • 38.65 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC100006770 34
  • 44.91 (n)
  • 33.33 (a)
C7orf62 35
  • 27 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 28 (a)
OneToOne
Species where no ortholog for C7orf62 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C7orf62 Gene

ENSEMBL:
Gene Tree for C7orf62 (if available)
TreeFam:
Gene Tree for C7orf62 (if available)

Paralogs for C7orf62 Gene

No data available for Paralogs for C7orf62 Gene

Variants for C7orf62 Gene

Sequence variations from dbSNP and Humsavar for C7orf62 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
VAR_039351 -
VAR_039352 -
VAR_039353 -
VAR_039354 -
VAR_039355 -

Structural Variations from Database of Genomic Variants (DGV) for C7orf62 Gene

Variant ID Type Subtype PubMed ID
dgv11493n54 CNV gain 21841781
dgv6525n100 CNV gain 25217958
dgv6526n100 CNV gain 25217958
esv2752187 CNV gain 17911159
esv2752188 CNV gain 17911159
esv2764019 CNV loss 21179565
esv3576400 CNV gain 25503493
esv3576401 CNV gain 25503493
nsv1015471 CNV gain 25217958
nsv464626 CNV gain 19166990
nsv515995 CNV gain+loss 19592680

Variation tolerance for C7orf62 Gene

Residual Variation Intolerance Score: 69.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.82; 73.82% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C7orf62 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C7orf62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C7orf62 Gene

Disorders for C7orf62 Gene

Relevant External Links for C7orf62

Genetic Association Database (GAD)
C7orf62
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C7orf62

No disorders were found for C7orf62 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf62 Gene

Publications for C7orf62 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 2 3 4 65
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N. … Do C.B. (PLoS ONE 2012) 3 65
  3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3 65
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 65
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 65

Products for C7orf62 Gene

Sources for C7orf62 Gene

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